RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 PLA2G10O15496 165 aa14.56□□□□□ -0.08
SYNE4-202ENST00000340477 YIF1AO95070 293 aa14.56□□□□□ -0.08
SYNE4-202ENST00000340477 IFNA10P01566 189 aa14.56□□□□□ -0.08
SYNE4-202ENST00000340477 IFNA21P01568 189 aa14.56□□□□□ -0.08
SYNE4-202ENST00000340477 IGHV3-48P01763 117 aa14.56□□□□□ -0.08
SYNE4-202ENST00000340477 ANXA7P20073 488 aaKnown RBP14.56□□□□□ -0.08
SYNE4-202ENST00000340477 ETFRF1Q6IPR1 90 aa14.56□□□□□ -0.08
SYNE4-202ENST00000340477 UNQ9165/PRO28630Q6UXU0 137 aa14.56□□□□□ -0.08
SYNE4-202ENST00000340477 RNASEH2CQ8TDP1 164 aaKnown RBP14.56□□□□□ -0.08
SYNE4-202ENST00000340477 RBKSQ9H477 322 aa14.56□□□□□ -0.08
SYNE4-202ENST00000340477 MRPL27Q9P0M9 148 aaKnown RBP14.56□□□□□ -0.08
SYNE4-202ENST00000340477 U3KQ87 197 aa14.56□□□□□ -0.08
SYNE4-202ENST00000340477 FAM90A26D6RGX4 464 aa14.55□□□□□ -0.08
SYNE4-202ENST00000340477 F8W735 103 aaPredicted RBP14.55□□□□□ -0.08
SYNE4-202ENST00000340477 CTSGP08311 255 aa14.55□□□□□ -0.08
SYNE4-202ENST00000340477 ADMP35318 185 aa14.55□□□□□ -0.08
SYNE4-202ENST00000340477 ATP5IP56385 69 aaPredicted RBP14.55□□□□□ -0.08
SYNE4-202ENST00000340477 CD300EQ496F6 205 aaPredicted RBP14.55□□□□□ -0.08
SYNE4-202ENST00000340477 TM4SF20Q53R12 229 aa14.55□□□□□ -0.08
SYNE4-202ENST00000340477 PVRIGQ6DKI7 326 aa14.55□□□□□ -0.08
SYNE4-202ENST00000340477 UXS1Q8NBZ7 420 aa14.55□□□□□ -0.08
SYNE4-202ENST00000340477 CACNG8Q8WXS5 425 aa14.55□□□□□ -0.08
SYNE4-202ENST00000340477 B9D2Q9BPU9 175 aa14.55□□□□□ -0.08
SYNE4-202ENST00000340477 LSM4Q9Y4Z0 139 aaKnown RBP14.55□□□□□ -0.08
SYNE4-202ENST00000340477 FAM240BA0A1B0GVZ2 78 aa14.54□□□□□ -0.08
SYNE4-202ENST00000340477 TCRBP04435 133 aa14.54□□□□□ -0.08
SYNE4-202ENST00000340477 SLC25A4P12235 298 aa14.54□□□□□ -0.08
SYNE4-202ENST00000340477 GUCA2BQ16661 112 aa14.54□□□□□ -0.08
SYNE4-202ENST00000340477 DEFB114Q30KQ6 69 aa14.54□□□□□ -0.08
SYNE4-202ENST00000340477 GGNBP1Q5YKI7 109 aa14.54□□□□□ -0.08
SYNE4-202ENST00000340477 CIB3Q96Q77 187 aaPredicted RBP14.54□□□□□ -0.08
SYNE4-202ENST00000340477 GINS3Q9BRX5 216 aa14.54□□□□□ -0.08
SYNE4-202ENST00000340477 C15orf62A8K5M9 175 aa14.53□□□□□ -0.08
SYNE4-202ENST00000340477 RPP30P78346 268 aaKnown RBP14.53□□□□□ -0.08
SYNE4-202ENST00000340477 ADAMTSL5Q6ZMM2 481 aa14.53□□□□□ -0.08
SYNE4-202ENST00000340477 RBPMS2Q6ZRY4 209 aaKnown RBP14.53□□□□□ -0.08
SYNE4-202ENST00000340477 OR4X1Q8NH49 305 aa14.53□□□□□ -0.08
SYNE4-202ENST00000340477 NUDT15Q9NV35 164 aa14.53□□□□□ -0.08
SYNE4-202ENST00000340477 TRAV6A0A075B6T7 132 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 TRAV30A0A087WSZ9 112 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 K7EMT4 169 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 PITX3O75364 302 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 CLN5O75503 358 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 UPK1BO75841 260 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 IFNA4P05014 189 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 BMI1P35226 326 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 RAB11AP62491 216 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 ASAH1Q13510 395 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 BTNL8Q6UX41 500 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 ZNF600Q6ZNG1 722 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 ENKURQ8TC29 256 aa14.52□□□□□ -0.09
SYNE4-202ENST00000340477 IZUMO1RA6ND01 250 aa14.51□□□□□ -0.09
SYNE4-202ENST00000340477 WRBO00258 174 aa14.51□□□□□ -0.09
SYNE4-202ENST00000340477 EDN2P20800 178 aa14.51□□□□□ -0.09
SYNE4-202ENST00000340477 LAMTOR1Q6IAA8 161 aa14.51□□□□□ -0.09
SYNE4-202ENST00000340477 FNDC4Q9H6D8 234 aaPredicted RBP14.51□□□□□ -0.09
SYNE4-202ENST00000340477 MLXQ9UH92 298 aa14.51□□□□□ -0.09
SYNE4-202ENST00000340477 IGHV3OR16-8A0A075B7F1 116 aa14.5□□□□□ -0.09
SYNE4-202ENST00000340477 TRAV25A0A0B4J276 109 aa14.5□□□□□ -0.09
SYNE4-202ENST00000340477 ADAP1O75689 374 aa14.5□□□□□ -0.09
SYNE4-202ENST00000340477 TMEM50AO95807 157 aa14.5□□□□□ -0.09
SYNE4-202ENST00000340477 H2AFB2P0C5Z0 115 aa14.5□□□□□ -0.09
SYNE4-202ENST00000340477 C8orf88P0DMB2 117 aa14.5□□□□□ -0.09
SYNE4-202ENST00000340477 IAPPP10997 89 aa14.5□□□□□ -0.09
SYNE4-202ENST00000340477 CD81P60033 236 aa14.5□□□□□ -0.09
SYNE4-202ENST00000340477 MITD1Q8WV92 249 aa14.5□□□□□ -0.09
SYNE4-202ENST00000340477 PAIP2BQ9ULR5 123 aaKnown RBP14.5□□□□□ -0.09
SYNE4-202ENST00000340477 ZNF207O43670 478 aaKnown RBP14.49□□□□□ -0.09
SYNE4-202ENST00000340477 SYNGR2O43760 224 aa14.49□□□□□ -0.09
SYNE4-202ENST00000340477 RND2P52198 227 aa14.49□□□□□ -0.09
SYNE4-202ENST00000340477 DEFA1P59665 94 aa14.49□□□□□ -0.09
SYNE4-202ENST00000340477 DEFA3P59666 94 aa14.49□□□□□ -0.09
SYNE4-202ENST00000340477 SLC16A13Q7RTY0 426 aa14.49□□□□□ -0.09
SYNE4-202ENST00000340477 TMEM61Q8N0U2 210 aa14.49□□□□□ -0.09
SYNE4-202ENST00000340477 OR1S2Q8NGQ3 325 aa14.49□□□□□ -0.09
SYNE4-202ENST00000340477 WDR89Q96FK6 387 aaPredicted RBP14.49□□□□□ -0.09
SYNE4-202ENST00000340477 TBC1D24Q9ULP9 559 aa14.49□□□□□ -0.09
SYNE4-202ENST00000340477 PUS1Q9Y606 427 aaKnown RBP eCLIP14.49□□□□□ -0.09
SYNE4-202ENST00000340477 TRAV14DV4A0A0A6YYC5 116 aa14.48□□□□□ -0.09
SYNE4-202ENST00000340477 NHLRC4P0CG21 123 aaPredicted RBP14.48□□□□□ -0.09
SYNE4-202ENST00000340477 TMEM116Q8NCL8 245 aa14.48□□□□□ -0.09
SYNE4-202ENST00000340477 OR52B4Q8NGK2 314 aa14.48□□□□□ -0.09
SYNE4-202ENST00000340477 ACY3Q96HD9 319 aa14.48□□□□□ -0.09
SYNE4-202ENST00000340477 SLC35E1Q96K37 410 aa14.48□□□□□ -0.09
SYNE4-202ENST00000340477 OR10C1Q96KK4 312 aa14.48□□□□□ -0.09
SYNE4-202ENST00000340477 MAGT1Q9H0U3 335 aa14.48□□□□□ -0.09
SYNE4-202ENST00000340477 TUBA4BQ9H853 241 aa14.48□□□□□ -0.09
SYNE4-202ENST00000340477 IGHV7-4-1A0A0J9YVY3 117 aa14.47□□□□□ -0.09
SYNE4-202ENST00000340477 SCAF4O95104 1147 aaKnown RBP14.47□□□□□ -0.09
SYNE4-202ENST00000340477 OR10J1P30954 320 aa14.47□□□□□ -0.09
SYNE4-202ENST00000340477 NKX2-1P43699 371 aaPredicted RBP14.47□□□□□ -0.09
SYNE4-202ENST00000340477 C11orf87Q6NUJ2 197 aa14.47□□□□□ -0.09
SYNE4-202ENST00000340477 PRSS54Q6PEW0 395 aa14.47□□□□□ -0.09
SYNE4-202ENST00000340477 TOMM20LQ6UXN7 152 aa14.47□□□□□ -0.09
SYNE4-202ENST00000340477 ZNF431Q8TF32 576 aaPredicted RBP14.47□□□□□ -0.09
SYNE4-202ENST00000340477 TMEM170AQ8WVE7 144 aa14.47□□□□□ -0.09
SYNE4-202ENST00000340477 NARS2Q96I59 477 aaKnown RBP14.47□□□□□ -0.09
SYNE4-202ENST00000340477 NEURL2Q9BR09 285 aa14.47□□□□□ -0.09
SYNE4-202ENST00000340477 TMEM231Q9H6L2 316 aa14.47□□□□□ -0.09
SYNE4-202ENST00000340477 SELENOKQ9Y6D0 94 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms