RNA–Protein interactions for RNA: ENST00000338602.6

SLC28A1-202, Transcript of solute carrier family 28 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC28A1, Length 1,360 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-202ENST00000338602 B9D2Q9BPU9 175 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 MARVELD1Q9BSK0 173 aa8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 MRPL27Q9P0M9 148 aaKnown RBP8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 LSM4Q9Y4Z0 139 aaKnown RBP8.61□□□□□ -1.03
SLC28A1-202ENST00000338602 TRAV6A0A075B6T7 132 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 IGHV3-35A0A0C4DH35 117 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 C9orf170A2RU37 121 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 MED6O75586 246 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 YIF1AO95070 293 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 IFNA10P01566 189 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 IFNA21P01568 189 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 H2AFB2P0C5Z0 115 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 OR4E1P0C645 316 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 BCAP31P51572 246 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 ATP5IP56385 69 aaPredicted RBP8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 DEFB114Q30KQ6 69 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 ANKRD55Q3KP44 614 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 C2orf83Q53S99 150 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 PVRIGQ6DKI7 326 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 ETFRF1Q6IPR1 90 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 UXS1Q8NBZ7 420 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 RNASEH2CQ8TDP1 164 aaKnown RBP8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 DTD1Q8TEA8 209 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 TMEM190Q8WZ59 177 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 CHRDL1Q9BU40 450 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 C20orf24Q9BUV8 137 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 DAZ1Q9NQZ3 744 aaKnown RBP8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 HSPB7Q9UBY9 170 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 FLVCR2Q9UPI3 526 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 U3KQ87 197 aa8.6□□□□□ -1.03
SLC28A1-202ENST00000338602 BIRC6Q9NR09 4857 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 TMEM213A2RRL7 107 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 FAM90A26D6RGX4 464 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 K7EMT4 169 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 NXPH3O95157 252 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 CTSGP08311 255 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 HOXB5P09067 269 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 NPY1RP25929 384 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 BSXQ3C1V8 233 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 CD300EQ496F6 205 aaPredicted RBP8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 TM4SF20Q53R12 229 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 RBPMS2Q6ZRY4 209 aaKnown RBP8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 LYG2Q86SG7 212 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 NUDT15Q9NV35 164 aa8.59□□□□□ -1.03
SLC28A1-202ENST00000338602 TRAV30A0A087WSZ9 112 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 C15orf62A8K5M9 175 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 F8W735 103 aaPredicted RBP8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 IGHV3-48P01763 117 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 NHLRC4P0CG21 123 aaPredicted RBP8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 SLC25A4P12235 298 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 BMI1P35226 326 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 ADMP35318 185 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 RPP30P78346 268 aaKnown RBP8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 DHRS2Q13268 280 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 GUCA2BQ16661 112 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 LAMTOR1Q6IAA8 161 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 UNQ9165/PRO28630Q6UXU0 137 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 OR4X1Q8NH49 305 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 CIB3Q96Q77 187 aaPredicted RBP8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 GINS3Q9BRX5 216 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 C20orf85Q9H1P6 137 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 RBKSQ9H477 322 aa8.58□□□□□ -1.04
SLC28A1-202ENST00000338602 TRAV25A0A0B4J276 109 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 CLN5O75503 358 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 TMEM50AO95807 157 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 IFNA4P05014 189 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 C8orf88P0DMB2 117 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 ANXA7P20073 488 aaKnown RBP8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 RAB11AP62491 216 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 GGNBP1Q5YKI7 109 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 ADAMTSL5Q6ZMM2 481 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 ZNF600Q6ZNG1 722 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 SLC16A13Q7RTY0 426 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 CACNG8Q8WXS5 425 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 ALG5Q9Y673 324 aa8.57□□□□□ -1.04
SLC28A1-202ENST00000338602 TRAV14DV4A0A0A6YYC5 116 aa8.56□□□□□ -1.04
SLC28A1-202ENST00000338602 PITX3O75364 302 aa8.56□□□□□ -1.04
SLC28A1-202ENST00000338602 BTNL8Q6UX41 500 aa8.56□□□□□ -1.04
SLC28A1-202ENST00000338602 TUBA4BQ9H853 241 aa8.56□□□□□ -1.04
SLC28A1-202ENST00000338602 MLXQ9UH92 298 aa8.56□□□□□ -1.04
SLC28A1-202ENST00000338602 IZUMO1RA6ND01 250 aa8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 WRBO00258 174 aa8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 SYNGR2O43760 224 aa8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 PFDN1O60925 122 aa8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 CD81P60033 236 aa8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 OR1S2Q8NGQ3 325 aa8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 Q8WTZ3 238 aa8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 MITD1Q8WV92 249 aa8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 WDR89Q96FK6 387 aaPredicted RBP8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 NARS2Q96I59 477 aaKnown RBP8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 NEURL2Q9BR09 285 aa8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 FNDC4Q9H6D8 234 aaPredicted RBP8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 TMEM231Q9H6L2 316 aa8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 PAIP2BQ9ULR5 123 aaKnown RBP8.55□□□□□ -1.04
SLC28A1-202ENST00000338602 IGHV3OR16-8A0A075B7F1 116 aa8.54□□□□□ -1.04
SLC28A1-202ENST00000338602 IGHV7-4-1A0A0J9YVY3 117 aa8.54□□□□□ -1.04
SLC28A1-202ENST00000338602 ZNF785A8K8V0 405 aa8.54□□□□□ -1.04
SLC28A1-202ENST00000338602 ZNF207O43670 478 aaKnown RBP8.54□□□□□ -1.04
SLC28A1-202ENST00000338602 ADAP1O75689 374 aa8.54□□□□□ -1.04
SLC28A1-202ENST00000338602 SCAF4O95104 1147 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms