RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 LINC01559Q495D7 138 aa17.51■□□□□ 0.39
RNF40-201ENST00000324685 EFNB3Q15768 340 aa17.51■□□□□ 0.39
RNF40-201ENST00000324685 SPAG17Q6Q759 2223 aa17.51■□□□□ 0.39
RNF40-201ENST00000324685 COL5A3P25940 1745 aaPredicted RBP17.51■□□□□ 0.39
RNF40-201ENST00000324685 OVOL1O14753 267 aa17.51■□□□□ 0.39
RNF40-201ENST00000324685 FBLN7Q53RD9 439 aa17.51■□□□□ 0.39
RNF40-201ENST00000324685 ABHD17AQ96GS6 310 aa17.51■□□□□ 0.39
RNF40-201ENST00000324685 UBE2CO00762 179 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 PLNP26678 52 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 C8orf46Q8TAG6 207 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 TRAV8-4A0A0B4J246 113 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 TNFRSF14Q92956 283 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 FNDC4Q9H6D8 234 aaPredicted RBP17.5■□□□□ 0.39
RNF40-201ENST00000324685 IGKV1-9A0A0C4DH69 117 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 OR9G9P0C7N8 305 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 HTN3P15516 51 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 TMEM242Q9NWH2 141 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 LOC102723996A0A087X1L8 192 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 CD28P10747 220 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 FAM166AQ6J272 317 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 OCC1Q8TAD7 63 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 SMPXQ9UHP9 88 aa17.5■□□□□ 0.39
RNF40-201ENST00000324685 RHOGP84095 191 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST1H2BKO60814 126 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST1H2BJP06899 126 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST1H2BOP23527 126 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 DUTP33316 252 aaKnown RBP17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST1H2BBP33778 126 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST1H2BDP58876 126 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST1H2BCP62807 126 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST2H2BEQ16778 126 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.49■□□□□ 0.39
RNF40-201ENST00000324685 GLMPQ8WWB7 406 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST1H2BHQ93079 126 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST1H2BNQ99877 126 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 HIST1H2BMQ99879 126 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 WDR83OSQ9Y284 106 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 BRWD1Q9NSI6 2320 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 RBBP6Q7Z6E9 1792 aaKnown RBP17.49■□□□□ 0.39
RNF40-201ENST00000324685 LINC00587B1AMM8 73 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 CD55P08174 381 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 TEX38Q6PEX7 206 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 SEPSECSQ9HD40 501 aaKnown RBP17.49■□□□□ 0.39
RNF40-201ENST00000324685 IGKV3D-20A0A0C4DH25 116 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 CEACAM1P13688 526 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 WFDC1Q9HC57 220 aa17.49■□□□□ 0.39
RNF40-201ENST00000324685 TRAV2A0A0B4J234 112 aa17.48■□□□□ 0.39
RNF40-201ENST00000324685 A0A1W2PRX2 142 aa17.48■□□□□ 0.39
RNF40-201ENST00000324685 J3QRE1 110 aa17.48■□□□□ 0.39
RNF40-201ENST00000324685 LYPD3O95274 346 aa17.48■□□□□ 0.39
RNF40-201ENST00000324685 HSD52Q0P140 79 aa17.48■□□□□ 0.39
RNF40-201ENST00000324685 JMJD8Q96S16 334 aa17.48■□□□□ 0.39
RNF40-201ENST00000324685 LTBP4Q8N2S1 1624 aa17.48■□□□□ 0.39
RNF40-201ENST00000324685 TRAV12-3A0A0B4J271 114 aa17.48■□□□□ 0.39
RNF40-201ENST00000324685 TRIP12Q14669 1992 aaPredicted RBP17.48■□□□□ 0.39
RNF40-201ENST00000324685 PHLDA1Q8WV24 401 aaPredicted RBP17.48■□□□□ 0.39
RNF40-201ENST00000324685 H0YIZ8 118 aa17.47■□□□□ 0.39
RNF40-201ENST00000324685 MS4A6AQ9H2W1 248 aa17.47■□□□□ 0.39
RNF40-201ENST00000324685 SEC11AP67812 179 aa17.47■□□□□ 0.39
RNF40-201ENST00000324685 MEGF9Q9H1U4 602 aa17.47■□□□□ 0.39
RNF40-201ENST00000324685 NAPSAO96009 420 aa17.47■□□□□ 0.39
RNF40-201ENST00000324685 ERVK11-1P61568 191 aa17.47■□□□□ 0.39
RNF40-201ENST00000324685 HEPN1Q6WQI6 88 aa17.47■□□□□ 0.39
RNF40-201ENST00000324685 DEPPQ9NTK1 212 aa17.47■□□□□ 0.39
RNF40-201ENST00000324685 GFI1BQ5VTD9 330 aa17.46■□□□□ 0.39
RNF40-201ENST00000324685 C1QL4Q86Z23 238 aa17.46■□□□□ 0.39
RNF40-201ENST00000324685 ATG2BQ96BY7 2078 aa17.46■□□□□ 0.39
RNF40-201ENST00000324685 THBDP07204 575 aa17.46■□□□□ 0.39
RNF40-201ENST00000324685 CDKN1AP38936 164 aa17.46■□□□□ 0.39
RNF40-201ENST00000324685 COL4A5P29400 1685 aa17.46■□□□□ 0.39
RNF40-201ENST00000324685 IFI27L1Q96BM0 104 aa17.46■□□□□ 0.39
RNF40-201ENST00000324685 A0A0A6YYD4 124 aa17.45■□□□□ 0.38
RNF40-201ENST00000324685 A8MWV9 139 aa17.45■□□□□ 0.38
RNF40-201ENST00000324685 DTX2Q86UW9 622 aa17.45■□□□□ 0.38
RNF40-201ENST00000324685 SIGLEC15Q6ZMC9 328 aa17.45■□□□□ 0.38
RNF40-201ENST00000324685 PAQR4Q8N4S7 273 aaPredicted RBP17.45■□□□□ 0.38
RNF40-201ENST00000324685 TRGV4A0A0C4DH28 118 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 CCDC88CQ9P219 2028 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 IGHV1-18A0A0C4DH31 117 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 ZNF688P0C7X2 276 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 EVI2AP22794 236 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 A0A1B0GW64 132 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 CRPP02741 224 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 ATXN8Q156A1 80 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 TMEM86BQ8N661 226 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 COL4A1P02462 1669 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 PAX8Q06710 450 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 ANAPC13Q9BS18 74 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 LAGE3Q14657 143 aa17.44■□□□□ 0.38
RNF40-201ENST00000324685 MORN3Q6PF18 240 aaPredicted RBP17.44■□□□□ 0.38
RNF40-201ENST00000324685 ZNF479Q96JC4 524 aa17.43■□□□□ 0.38
RNF40-201ENST00000324685 ANKRD36A6QL64 1941 aa17.43■□□□□ 0.38
RNF40-201ENST00000324685 PTPRFP10586 1907 aa17.43■□□□□ 0.38
RNF40-201ENST00000324685 SIGMAR1Q99720 223 aa17.43■□□□□ 0.38
RNF40-201ENST00000324685 COL11A2P13942 1736 aaPredicted RBP17.43■□□□□ 0.38
RNF40-201ENST00000324685 TRBV24-1A0A075B6N3 115 aa17.43■□□□□ 0.38
RNF40-201ENST00000324685 ADARB2-AS1A8MUL3 147 aa17.43■□□□□ 0.38
RNF40-201ENST00000324685 RASL11AQ6T310 242 aa17.43■□□□□ 0.38
RNF40-201ENST00000324685 OR9G4Q8NGQ1 327 aa17.43■□□□□ 0.38
RNF40-201ENST00000324685 GGTLC3B5MD39 225 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 268.2 ms