RNA–Protein interactions for RNA: ENST00000324238.6

CRLF3-201, Transcript of cytokine receptor like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRLF3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-201ENST00000324238 MIEN1Q9BRT3 115 aa16.13■□□□□ 0.17
CRLF3-201ENST00000324238 IGHV3-72A0A0B4J1Y9 119 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 RNASE2P10153 161 aaKnown RBP16.12■□□□□ 0.17
CRLF3-201ENST00000324238 MZT1Q08AG7 82 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 HARBI1Q96MB7 349 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 TMEM208Q9BTX3 173 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 CORTO00230 105 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 KLK10O43240 276 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 CAMPP49913 170 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 MMDQ15546 238 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 TMEM183BQ1AE95 376 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 SLC25A33Q9BSK2 321 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 SFXN3Q9BWM7 321 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 CDC42EP3Q9UKI2 254 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 PRNDQ9UKY0 176 aa16.12■□□□□ 0.17
CRLF3-201ENST00000324238 BLNKQ8WV28 456 aa16.11■□□□□ 0.17
CRLF3-201ENST00000324238 NPIPB3Q92617 1050 aa16.11■□□□□ 0.17
CRLF3-201ENST00000324238 TMEM167BQ9NRX6 74 aa16.11■□□□□ 0.17
CRLF3-201ENST00000324238 FOSL1P15407 271 aa16.11■□□□□ 0.17
CRLF3-201ENST00000324238 BRS3P32247 399 aa16.11■□□□□ 0.17
CRLF3-201ENST00000324238 Q6ZVH6 145 aa16.11■□□□□ 0.17
CRLF3-201ENST00000324238 TM4SF5O14894 197 aa16.11■□□□□ 0.17
CRLF3-201ENST00000324238 GLRXP35754 106 aa16.11■□□□□ 0.17
CRLF3-201ENST00000324238 Q8N976 141 aa16.11■□□□□ 0.17
CRLF3-201ENST00000324238 COMMD5Q9GZQ3 224 aa16.11■□□□□ 0.17
CRLF3-201ENST00000324238 OR5G3P0C626 314 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 AKAP6Q13023 2319 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 RTL8BQ17RB0 113 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 STUMQ69YW2 141 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 H1FXQ92522 213 aaKnown RBP16.1■□□□□ 0.17
CRLF3-201ENST00000324238 RITA1Q96K30 269 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 GNB1LQ9BYB4 327 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 FNDC4Q9H6D8 234 aaPredicted RBP16.1■□□□□ 0.17
CRLF3-201ENST00000324238 USF1P22415 310 aaPredicted RBP16.1■□□□□ 0.17
CRLF3-201ENST00000324238 IGFL2Q6UWQ7 119 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 SLC25A2Q9BXI2 301 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 ZNF586Q9NXT0 402 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 TP73-AS1Q9UF72 201 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 IGF2RP11717 2491 aa16.1■□□□□ 0.17
CRLF3-201ENST00000324238 C8orf88P0DMB2 117 aa16.09■□□□□ 0.17
CRLF3-201ENST00000324238 MFAP2P55001 183 aa16.09■□□□□ 0.17
CRLF3-201ENST00000324238 TPSG1Q9NRR2 321 aa16.09■□□□□ 0.17
CRLF3-201ENST00000324238 COL12A1Q99715 3063 aa16.09■□□□□ 0.17
CRLF3-201ENST00000324238 MOSP00540 346 aa16.09■□□□□ 0.17
CRLF3-201ENST00000324238 RPLP1P05386 114 aaKnown RBP16.09■□□□□ 0.17
CRLF3-201ENST00000324238 Q0VG73 95 aa16.09■□□□□ 0.17
CRLF3-201ENST00000324238 SPATA45Q537H7 98 aa16.09■□□□□ 0.17
CRLF3-201ENST00000324238 GDF5OSQ5U4N7 250 aa16.09■□□□□ 0.17
CRLF3-201ENST00000324238 FAM167A-AS1Q96KT0 104 aa16.09■□□□□ 0.17
CRLF3-201ENST00000324238 TMEM68Q96MH6 324 aa16.09■□□□□ 0.17
CRLF3-201ENST00000324238 RPUSD1Q9UJJ7 312 aaKnown RBP16.09■□□□□ 0.17
CRLF3-201ENST00000324238 ISLRO14498 428 aa16.08■□□□□ 0.17
CRLF3-201ENST00000324238 TOX4O94842 621 aa16.08■□□□□ 0.17
CRLF3-201ENST00000324238 CFHR2P36980 270 aa16.08■□□□□ 0.17
CRLF3-201ENST00000324238 CD69Q07108 199 aa16.08■□□□□ 0.17
CRLF3-201ENST00000324238 HCP5Q6MZN7 132 aa16.08■□□□□ 0.17
CRLF3-201ENST00000324238 M0QZ24 198 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 FCN3O75636 299 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 C3orf79P0CE67 100 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 ORM2P19652 201 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 WT1-ASQ06250 92 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 LEMD1Q68G75 181 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 CCL17Q92583 94 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 C20orf144Q9BQM9 153 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 A0A1B0GWJ7 208 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 TIMM23BQ5SRD1 257 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 PATE2Q6UY27 113 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 SLC25A48Q6ZT89 311 aaKnown RBP16.08■□□□□ 0.16
CRLF3-201ENST00000324238 CORO2AQ92828 525 aa16.08■□□□□ 0.16
CRLF3-201ENST00000324238 SLC25A10Q9UBX3 287 aaPredicted RBP16.08■□□□□ 0.16
CRLF3-201ENST00000324238 AMMECR1Q9Y4X0 333 aaPredicted RBP16.08■□□□□ 0.16
CRLF3-201ENST00000324238 MBD3L4A6NDZ8 208 aaPredicted RBP16.07■□□□□ 0.16
CRLF3-201ENST00000324238 MBD3L3A6NE82 208 aaPredicted RBP16.07■□□□□ 0.16
CRLF3-201ENST00000324238 MBD3L5A6NJ08 208 aaPredicted RBP16.07■□□□□ 0.16
CRLF3-201ENST00000324238 APCSP02743 223 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 PPOXP50336 477 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 RPL8P62917 257 aaKnown RBP16.07■□□□□ 0.16
CRLF3-201ENST00000324238 MBD3L2Q8NHZ7 208 aaPredicted RBP16.07■□□□□ 0.16
CRLF3-201ENST00000324238 SLC35E1Q96K37 410 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 IGF2BP2-AS1Q96M15 143 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 GSX1Q9H4S2 264 aaPredicted RBP16.07■□□□□ 0.16
CRLF3-201ENST00000324238 LPAR2Q9HBW0 351 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 COL6A6A6NMZ7 2263 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 COX7A2P2O60397 106 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 SELENOVP59797 346 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 PMCHL1Q16048 86 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 DNAJC4Q9NNZ3 241 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 OSTCQ9NRP0 149 aa16.07■□□□□ 0.16
CRLF3-201ENST00000324238 SH2D7A6NKC9 451 aaPredicted RBP16.06■□□□□ 0.16
CRLF3-201ENST00000324238 TAS2R45P59539 299 aa16.06■□□□□ 0.16
CRLF3-201ENST00000324238 ZNF788Q6ZQV5 615 aa16.06■□□□□ 0.16
CRLF3-201ENST00000324238 NIT1Q86X76 327 aa16.06■□□□□ 0.16
CRLF3-201ENST00000324238 TSKUQ8WUA8 353 aa16.06■□□□□ 0.16
CRLF3-201ENST00000324238 ASCL2Q99929 193 aa16.06■□□□□ 0.16
CRLF3-201ENST00000324238 SPTAN1Q13813 2472 aaKnown RBP16.06■□□□□ 0.16
CRLF3-201ENST00000324238 CUL9Q8IWT3 2517 aa16.06■□□□□ 0.16
CRLF3-201ENST00000324238 ESDP10768 282 aa16.06■□□□□ 0.16
CRLF3-201ENST00000324238 ZNF331Q9NQX6 463 aaPredicted RBP16.06■□□□□ 0.16
CRLF3-201ENST00000324238 AMY1AP04745 511 aa16.05■□□□□ 0.16
CRLF3-201ENST00000324238 ADTRPQ96IZ2 230 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms