RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 MRPL36Q9P0J6 103 aaKnown RBP12.81□□□□□ -0.36
SHISA2-201ENST00000319420 TMEM241Q24JQ0 296 aa12.81□□□□□ -0.36
SHISA2-201ENST00000319420 MIR17HGQ75NE6 70 aa12.81□□□□□ -0.36
SHISA2-201ENST00000319420 GSX1Q9H4S2 264 aaPredicted RBP12.81□□□□□ -0.36
SHISA2-201ENST00000319420 FNDC4Q9H6D8 234 aaPredicted RBP12.81□□□□□ -0.36
SHISA2-201ENST00000319420 MC5RP33032 325 aa12.8□□□□□ -0.36
SHISA2-201ENST00000319420 RPL23P62829 140 aaKnown RBP12.8□□□□□ -0.36
SHISA2-201ENST00000319420 TMEM167AQ8TBQ9 72 aa12.8□□□□□ -0.36
SHISA2-201ENST00000319420 UHRF2Q96PU4 802 aa12.8□□□□□ -0.36
SHISA2-201ENST00000319420 BPESC1Q9GZL8 116 aa12.8□□□□□ -0.36
SHISA2-201ENST00000319420 A0A087X0M5 115 aa12.8□□□□□ -0.36
SHISA2-201ENST00000319420 A0A1B0GX30 115 aa12.8□□□□□ -0.36
SHISA2-201ENST00000319420 ZNF90Q03938 601 aa12.8□□□□□ -0.36
SHISA2-201ENST00000319420 PNRC1Q12796 327 aaPredicted RBP12.8□□□□□ -0.36
SHISA2-201ENST00000319420 SPNS3Q6ZMD2 512 aa12.8□□□□□ -0.36
SHISA2-201ENST00000319420 NAT8Q9UHE5 227 aa12.8□□□□□ -0.36
SHISA2-201ENST00000319420 B4DEV8 164 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 MPDU1O75352 247 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 CNIH1O95406 144 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 MOSP00540 346 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 IGHV2-5P01817 119 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 COTL1Q14019 142 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 NEU4Q8WWR8 484 aaPredicted RBP12.79□□□□□ -0.36
SHISA2-201ENST00000319420 MANBALQ9NQG1 85 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 S4R3C0 116 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 OR7C2O60412 319 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 TRGC2P03986 189 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 HTR1DP28221 377 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 CYP2G1PQ6ZSU1 146 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 ATG101Q9BSB4 218 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 C2orf88Q9BSF0 95 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 PRO1933Q9H354 126 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 TMEM250H0YL14 139 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 CLDN34H7C241 214 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 NDUFB4O95168 129 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 PSG5Q15238 335 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 C16orf82Q7Z2V1 217 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 ZNF596Q8TC21 504 aa12.79□□□□□ -0.36
SHISA2-201ENST00000319420 IGHV3OR16-10A0A075B7F0 116 aa12.78□□□□□ -0.36
SHISA2-201ENST00000319420 SLC35E1Q96K37 410 aa12.78□□□□□ -0.36
SHISA2-201ENST00000319420 TRAV5A0A0B4J249 113 aa12.78□□□□□ -0.36
SHISA2-201ENST00000319420 DDTP30046 118 aa12.78□□□□□ -0.36
SHISA2-201ENST00000319420 RPL27AP46776 148 aaKnown RBP12.78□□□□□ -0.36
SHISA2-201ENST00000319420 RND2P52198 227 aa12.78□□□□□ -0.36
SHISA2-201ENST00000319420 CD69Q07108 199 aa12.78□□□□□ -0.36
SHISA2-201ENST00000319420 BSXQ3C1V8 233 aa12.78□□□□□ -0.36
SHISA2-201ENST00000319420 PPP1R27Q86WC6 154 aa12.78□□□□□ -0.36
SHISA2-201ENST00000319420 SIGLEC9Q9Y336 463 aa12.78□□□□□ -0.36
SHISA2-201ENST00000319420 PRB4P10163 310 aaPredicted RBP12.77□□□□□ -0.36
SHISA2-201ENST00000319420 ZNF137PP52743 207 aa12.77□□□□□ -0.36
SHISA2-201ENST00000319420 RAB4BP61018 213 aa12.77□□□□□ -0.36
SHISA2-201ENST00000319420 USF2Q15853 346 aaPredicted RBP12.77□□□□□ -0.36
SHISA2-201ENST00000319420 PRSS8Q16651 343 aa12.77□□□□□ -0.36
SHISA2-201ENST00000319420 C2orf83Q53S99 150 aa12.77□□□□□ -0.36
SHISA2-201ENST00000319420 MORN5Q5VZ52 161 aa12.77□□□□□ -0.36
SHISA2-201ENST00000319420 VMO1Q7Z5L0 202 aa12.77□□□□□ -0.36
SHISA2-201ENST00000319420 DTX2Q86UW9 622 aa12.77□□□□□ -0.36
SHISA2-201ENST00000319420 C1QL4Q86Z23 238 aa12.77□□□□□ -0.36
SHISA2-201ENST00000319420 NRGNQ92686 78 aa12.77□□□□□ -0.36
SHISA2-201ENST00000319420 ELOVL1Q9BW60 279 aa12.77□□□□□ -0.36
SHISA2-201ENST00000319420 ZANQ9Y493 2812 aa12.77□□□□□ -0.37
SHISA2-201ENST00000319420 NCBP2LA6PVI3 153 aaKnown RBP12.77□□□□□ -0.37
SHISA2-201ENST00000319420 LINC00869P0C866 280 aa12.77□□□□□ -0.37
SHISA2-201ENST00000319420 STAG3L2P0CL84 134 aa12.77□□□□□ -0.37
SHISA2-201ENST00000319420 STAG3L3P0CL85 134 aa12.77□□□□□ -0.37
SHISA2-201ENST00000319420 MAJINQ3KP22 176 aa12.77□□□□□ -0.37
SHISA2-201ENST00000319420 TMEM144Q7Z5S9 345 aa12.77□□□□□ -0.37
SHISA2-201ENST00000319420 FAM210BQ96KR6 192 aa12.77□□□□□ -0.37
SHISA2-201ENST00000319420 LGALS7P47929 136 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 MRGPRG-AS1Q2M3A8 158 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 KLF17Q5JT82 389 aaPredicted RBP12.76□□□□□ -0.37
SHISA2-201ENST00000319420 SLC25A33Q9BSK2 321 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 A0A0U1RQK1 487 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 A0A1W2PN81 502 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 AP4M1O00189 453 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 OR5G3P0C626 314 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 CHRNA7P36544 502 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 DYNAPQ8N1N2 210 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 ZNF114Q8NC26 417 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 DPM3Q9P2X0 92 aa12.76□□□□□ -0.37
SHISA2-201ENST00000319420 YTHDF2Q9Y5A9 579 aaKnown RBP12.76□□□□□ -0.37
SHISA2-201ENST00000319420 SCO2A0A1W2PP80 73 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 A6NNC1 897 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 ORM2P19652 201 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 MFAP2P55001 183 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 NDUFA6P56556 154 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 NUTF2P61970 127 aaKnown RBP12.75□□□□□ -0.37
SHISA2-201ENST00000319420 RHOBP62745 196 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 C8orf31Q8N9H6 132 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 SVIPQ8NHG7 77 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 TMEM242Q9NWH2 141 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 SLC45A2Q9UMX9 530 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 PRR20EP86478 221 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 PRR20CP86479 221 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 PRR20DP86480 221 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 PRR20BP86481 221 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 PRR20AP86496 221 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 BEND2Q8NDZ0 799 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 IGLC7A0M8Q6 106 aa12.75□□□□□ -0.37
SHISA2-201ENST00000319420 RPL29P47914 159 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms