RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 IGHG2P01859 326 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 OR10J1P30954 320 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 MIC13Q5XKP0 118 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 ACSM6Q6P461 480 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 COMMD7Q86VX2 200 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 FANCD2OSQ96PS1 177 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 HRH4Q9H3N8 390 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 RPRMQ9NS64 109 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 THYN1Q9P016 225 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 PXMP4Q9Y6I8 212 aa17.72■□□□□ 0.43
IRF3-201ENST00000309877 IGKV1OR2-108A0A075B7D4 117 aa17.71■□□□□ 0.43
IRF3-201ENST00000309877 G3V318 75 aa17.71■□□□□ 0.43
IRF3-201ENST00000309877 TSPAN15O95858 294 aa17.71■□□□□ 0.43
IRF3-201ENST00000309877 MRPL36Q9P0J6 103 aaKnown RBP17.71■□□□□ 0.43
IRF3-201ENST00000309877 TRAV41A0A0B4J266 112 aa17.71■□□□□ 0.42
IRF3-201ENST00000309877 ZFP92A6NM28 416 aa17.71■□□□□ 0.42
IRF3-201ENST00000309877 TEX46H3BTG2 121 aa17.71■□□□□ 0.42
IRF3-201ENST00000309877 HIST1H1BP16401 226 aaKnown RBP17.71■□□□□ 0.42
IRF3-201ENST00000309877 RPL29P47914 159 aaKnown RBP17.71■□□□□ 0.42
IRF3-201ENST00000309877 ACOT6Q3I5F7 207 aaPredicted RBP17.71■□□□□ 0.42
IRF3-201ENST00000309877 RBMS3Q6XE24 437 aaKnown RBP17.71■□□□□ 0.42
IRF3-201ENST00000309877 TMEM116Q8NCL8 245 aa17.71■□□□□ 0.42
IRF3-201ENST00000309877 ZNF355PQ9NSJ1 428 aa17.71■□□□□ 0.42
IRF3-201ENST00000309877 MED9Q9NWA0 146 aa17.71■□□□□ 0.42
IRF3-201ENST00000309877 AKAP9Q99996 3911 aa17.7■□□□□ 0.42
IRF3-201ENST00000309877 ZNF469Q96JG9 3925 aaPredicted RBP17.7■□□□□ 0.42
IRF3-201ENST00000309877 K7EIM0 57 aa17.7■□□□□ 0.42
IRF3-201ENST00000309877 ATP6V1G1O75348 118 aa17.7■□□□□ 0.42
IRF3-201ENST00000309877 CRIP2P52943 208 aaPredicted RBP17.7■□□□□ 0.42
IRF3-201ENST00000309877 RAB2AP61019 212 aa17.7■□□□□ 0.42
IRF3-201ENST00000309877 B2MP61769 119 aa17.7■□□□□ 0.42
IRF3-201ENST00000309877 THAP8Q8NA92 274 aa17.7■□□□□ 0.42
IRF3-201ENST00000309877 SLC45A2Q9UMX9 530 aa17.7■□□□□ 0.42
IRF3-201ENST00000309877 IGF1P05019 195 aa17.69■□□□□ 0.42
IRF3-201ENST00000309877 H2AFB1P0C5Y9 115 aa17.69■□□□□ 0.42
IRF3-201ENST00000309877 M6PRP20645 277 aa17.69■□□□□ 0.42
IRF3-201ENST00000309877 STPG3Q8N7X2 389 aa17.69■□□□□ 0.42
IRF3-201ENST00000309877 OR10G4Q8NGN3 311 aa17.69■□□□□ 0.42
IRF3-201ENST00000309877 OR10G9Q8NGN4 311 aa17.69■□□□□ 0.42
IRF3-201ENST00000309877 OR10G7Q8NGN6 311 aa17.69■□□□□ 0.42
IRF3-201ENST00000309877 LINC00527Q9UJ94 153 aa17.69■□□□□ 0.42
IRF3-201ENST00000309877 OR2J3O76001 311 aa17.68■□□□□ 0.42
IRF3-201ENST00000309877 CYP2G1PQ6ZSU1 146 aa17.68■□□□□ 0.42
IRF3-201ENST00000309877 BPIFCQ8NFQ6 507 aa17.68■□□□□ 0.42
IRF3-201ENST00000309877 SMR3AQ99954 134 aa17.68■□□□□ 0.42
IRF3-201ENST00000309877 TMEM160Q9NX00 188 aa17.68■□□□□ 0.42
IRF3-201ENST00000309877 SCGB2A2Q13296 93 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 Q6ZS46 218 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 OR4X1Q8NH49 305 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 SLC39A9Q9NUM3 307 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 FBXL7Q9UJT9 491 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 TCRBV4S1A1TA0A5B7 111 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 AP4M1O00189 453 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 PRR20EP86478 221 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 PRR20CP86479 221 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 PRR20DP86480 221 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 PRR20BP86481 221 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 PRR20AP86496 221 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 SFT2D1Q8WV19 159 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 CITED4Q96RK1 184 aa17.67■□□□□ 0.42
IRF3-201ENST00000309877 IGKV1D-37A0A075B6S9 117 aa17.66■□□□□ 0.42
IRF3-201ENST00000309877 YIF1AO95070 293 aa17.66■□□□□ 0.42
IRF3-201ENST00000309877 NDUFB8O95169 186 aa17.66■□□□□ 0.42
IRF3-201ENST00000309877 LY6G6DO95868 133 aa17.66■□□□□ 0.42
IRF3-201ENST00000309877 RPP25LQ8N5L8 163 aaKnown RBP17.66■□□□□ 0.42
IRF3-201ENST00000309877 TMEM86BQ8N661 226 aa17.66■□□□□ 0.42
IRF3-201ENST00000309877 MARC2Q969Z3 335 aa17.66■□□□□ 0.42
IRF3-201ENST00000309877 RCC1LQ96I51 464 aaKnown RBP17.66■□□□□ 0.42
IRF3-201ENST00000309877 ACTR3CQ9C0K3 210 aaPredicted RBP17.66■□□□□ 0.42
IRF3-201ENST00000309877 NUDT19A8MXV4 375 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 LINC00869P0C866 280 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 GATA2P23769 480 aaPredicted RBP17.65■□□□□ 0.42
IRF3-201ENST00000309877 MFAP4P55083 255 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 C19orf54Q5BKX5 351 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 GCSAMLQ5JQS6 135 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 FAM122CQ6P4D5 195 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 LYPD6BQ8NI32 183 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 NOL4LQ96MY1 436 aaPredicted RBP17.65■□□□□ 0.42
IRF3-201ENST00000309877 TRGV9Q99603 122 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 NPFFR1Q9GZQ6 430 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 NOTCH2Q04721 2471 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 MYO9AB2RTY4 2548 aa17.65■□□□□ 0.42
IRF3-201ENST00000309877 A0A1B0GV50 99 aa17.64■□□□□ 0.42
IRF3-201ENST00000309877 CLN5O75503 358 aa17.64■□□□□ 0.42
IRF3-201ENST00000309877 NPBWR1P48145 328 aa17.64■□□□□ 0.42
IRF3-201ENST00000309877 SELENOTP62341 195 aa17.64■□□□□ 0.42
IRF3-201ENST00000309877 ZNF90Q03938 601 aa17.64■□□□□ 0.42
IRF3-201ENST00000309877 KLK9Q2XQG4 91 aa17.64■□□□□ 0.42
IRF3-201ENST00000309877 IL34Q6ZMJ4 242 aa17.64■□□□□ 0.42
IRF3-201ENST00000309877 DUX5Q96PT3 197 aa17.64■□□□□ 0.42
IRF3-201ENST00000309877 PRSS22Q9GZN4 317 aa17.64■□□□□ 0.42
IRF3-201ENST00000309877 KLK9Q9UKQ9 250 aa17.64■□□□□ 0.42
IRF3-201ENST00000309877 HBE1P02100 147 aa17.64■□□□□ 0.41
IRF3-201ENST00000309877 RHOGP84095 191 aa17.64■□□□□ 0.41
IRF3-201ENST00000309877 ZNF726P1Q15940 193 aa17.64■□□□□ 0.41
IRF3-201ENST00000309877 LCN15Q6UWW0 184 aa17.64■□□□□ 0.41
IRF3-201ENST00000309877 MS4A10Q96PG2 267 aa17.64■□□□□ 0.41
IRF3-201ENST00000309877 C21orf62Q9NYP8 219 aa17.64■□□□□ 0.41
IRF3-201ENST00000309877 S4R3C0 116 aa17.64■□□□□ 0.41
IRF3-201ENST00000309877 TRBV9A0A0B4J1U6 114 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms