RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TOMM5Q8N4H5 51 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 OR52E5Q8NH55 327 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 TMEM170AQ8WVE7 144 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 RRNAD1Q96FB5 475 aaKnown RBP14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 RNF2Q99496 336 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 ZFAND3Q9H8U3 227 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 PRR13Q9NZ81 148 aa14.73□□□□□ -0.05
PDZRN3-202ENST00000308537 PLECQ15149 4684 aaKnown RBP14.72□□□□□ -0.05
PDZRN3-202ENST00000308537 INPP1P49441 399 aa14.72□□□□□ -0.05
PDZRN3-202ENST00000308537 DHODHQ02127 395 aa14.72□□□□□ -0.05
PDZRN3-202ENST00000308537 RELQ04864 619 aaPredicted RBP14.72□□□□□ -0.05
PDZRN3-202ENST00000308537 TOMM20LQ6UXN7 152 aa14.72□□□□□ -0.05
PDZRN3-202ENST00000308537 RHPN1-AS1Q9BWJ2 59 aa14.72□□□□□ -0.05
PDZRN3-202ENST00000308537 A0A1B0GU03 582 aa14.71□□□□□ -0.05
PDZRN3-202ENST00000308537 TMEM50AO95807 157 aa14.71□□□□□ -0.05
PDZRN3-202ENST00000308537 LYL1P12980 280 aa14.71□□□□□ -0.05
PDZRN3-202ENST00000308537 SPCS3P61009 180 aa14.71□□□□□ -0.05
PDZRN3-202ENST00000308537 TMEM268Q5VZI3 342 aa14.71□□□□□ -0.05
PDZRN3-202ENST00000308537 LILRB2Q8N423 598 aa14.71□□□□□ -0.05
PDZRN3-202ENST00000308537 CACNG5Q9UF02 275 aa14.71□□□□□ -0.05
PDZRN3-202ENST00000308537 UBQLN2Q9UHD9 624 aa14.71□□□□□ -0.05
PDZRN3-202ENST00000308537 IGHV3-49A0A0A0MS15 119 aa14.7□□□□□ -0.06
PDZRN3-202ENST00000308537 GNG7O60262 68 aa14.7□□□□□ -0.06
PDZRN3-202ENST00000308537 APOHP02749 345 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-202ENST00000308537 SNCAP37840 140 aa14.7□□□□□ -0.06
PDZRN3-202ENST00000308537 HOXA1P49639 335 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-202ENST00000308537 NMSQ5H8A3 153 aa14.7□□□□□ -0.06
PDZRN3-202ENST00000308537 GGTLC1Q9BX51 225 aa14.7□□□□□ -0.06
PDZRN3-202ENST00000308537 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.7□□□□□ -0.06
PDZRN3-202ENST00000308537 KCNIP3Q9Y2W7 256 aa14.7□□□□□ -0.06
PDZRN3-202ENST00000308537 NPBWR1P48145 328 aa14.69□□□□□ -0.06
PDZRN3-202ENST00000308537 ZFAND6Q6FIF0 208 aa14.69□□□□□ -0.06
PDZRN3-202ENST00000308537 LAMTOR1Q6IAA8 161 aa14.69□□□□□ -0.06
PDZRN3-202ENST00000308537 TMEM116Q8NCL8 245 aa14.69□□□□□ -0.06
PDZRN3-202ENST00000308537 DUSP18Q8NEJ0 188 aa14.69□□□□□ -0.06
PDZRN3-202ENST00000308537 IL22RA2Q969J5 263 aa14.69□□□□□ -0.06
PDZRN3-202ENST00000308537 OVOL2Q9BRP0 275 aa14.69□□□□□ -0.06
PDZRN3-202ENST00000308537 PDCD10Q9BUL8 212 aa14.69□□□□□ -0.06
PDZRN3-202ENST00000308537 VSIRQ9H7M9 311 aa14.69□□□□□ -0.06
PDZRN3-202ENST00000308537 IGHV3OR16-13A0A075B7E8 117 aa14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 LOC102724200A0A096LPH7 203 aaPredicted RBP14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 IGHV3-74A0A0B4J1X5 117 aa14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 PIGBOS1A0A0B4J2F0 54 aa14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 CORTO00230 105 aa14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 CLN5O75503 358 aa14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 IGKV1-17P01599 117 aa14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 TRIQKQ629K1 86 aa14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 ZNF600Q6ZNG1 722 aa14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 OR4X1Q8NH49 305 aa14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 RNASE11Q8TAA1 199 aaKnown RBP14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 PUS1Q9Y606 427 aaKnown RBP eCLIP14.68□□□□□ -0.06
PDZRN3-202ENST00000308537 TRAV14DV4A0A0A6YYC5 116 aa14.67□□□□□ -0.06
PDZRN3-202ENST00000308537 YIF1AO95070 293 aa14.67□□□□□ -0.06
PDZRN3-202ENST00000308537 C2orf83Q53S99 150 aa14.67□□□□□ -0.06
PDZRN3-202ENST00000308537 ST8SIA2Q92186 375 aa14.67□□□□□ -0.06
PDZRN3-202ENST00000308537 OR4C46A6NHA9 309 aa14.66□□□□□ -0.06
PDZRN3-202ENST00000308537 ANXA3P12429 323 aa14.66□□□□□ -0.06
PDZRN3-202ENST00000308537 SUB1P53999 127 aaKnown RBP eCLIP14.66□□□□□ -0.06
PDZRN3-202ENST00000308537 ZNF124Q15973 351 aa14.66□□□□□ -0.06
PDZRN3-202ENST00000308537 LYZL2Q7Z4W2 148 aa14.66□□□□□ -0.06
PDZRN3-202ENST00000308537 SLC25A21Q9BQT8 299 aaPredicted RBP14.66□□□□□ -0.06
PDZRN3-202ENST00000308537 A0A0B4J2A0 478 aa14.65□□□□□ -0.06
PDZRN3-202ENST00000308537 OPRK1P41145 380 aa14.65□□□□□ -0.06
PDZRN3-202ENST00000308537 HTR2BP41595 481 aa14.65□□□□□ -0.06
PDZRN3-202ENST00000308537 PRSS54Q6PEW0 395 aa14.65□□□□□ -0.06
PDZRN3-202ENST00000308537 SRRQ9GZT4 340 aa14.65□□□□□ -0.06
PDZRN3-202ENST00000308537 ENY2Q9NPA8 101 aa14.65□□□□□ -0.06
PDZRN3-202ENST00000308537 SHPKQ9UHJ6 478 aa14.65□□□□□ -0.06
PDZRN3-202ENST00000308537 CENPXA8MT69 81 aa14.64□□□□□ -0.07
PDZRN3-202ENST00000308537 NXPH3O95157 252 aa14.64□□□□□ -0.07
PDZRN3-202ENST00000308537 IGLC1P0CG04 106 aa14.64□□□□□ -0.07
PDZRN3-202ENST00000308537 SULT1A3P0DMM9 295 aa14.64□□□□□ -0.07
PDZRN3-202ENST00000308537 SULT1A4P0DMN0 295 aa14.64□□□□□ -0.07
PDZRN3-202ENST00000308537 AKR1C4P17516 323 aa14.64□□□□□ -0.07
PDZRN3-202ENST00000308537 SLC24A4Q8NFF2 622 aa14.64□□□□□ -0.07
PDZRN3-202ENST00000308537 HSPB7Q9UBY9 170 aa14.64□□□□□ -0.07
PDZRN3-202ENST00000308537 ALMS1Q8TCU4 4167 aa14.64□□□□□ -0.07
PDZRN3-202ENST00000308537 AGRNO00468 2067 aa14.64□□□□□ -0.07
PDZRN3-202ENST00000308537 NAP1L6A6NFF2 107 aa14.63□□□□□ -0.07
PDZRN3-202ENST00000308537 TNFRSF9Q07011 255 aa14.63□□□□□ -0.07
PDZRN3-202ENST00000308537 TIGITQ495A1 244 aa14.63□□□□□ -0.07
PDZRN3-202ENST00000308537 TCF24Q7RTU0 167 aa14.63□□□□□ -0.07
PDZRN3-202ENST00000308537 WFDC3Q8IUB2 231 aa14.63□□□□□ -0.07
PDZRN3-202ENST00000308537 APRG1Q8IVJ8 170 aa14.63□□□□□ -0.07
PDZRN3-202ENST00000308537 GINS3Q9BRX5 216 aa14.63□□□□□ -0.07
PDZRN3-202ENST00000308537 MAP6D1Q9H9H5 199 aa14.63□□□□□ -0.07
PDZRN3-202ENST00000308537 HEYLQ9NQ87 328 aaPredicted RBP14.63□□□□□ -0.07
PDZRN3-202ENST00000308537 CACFD1Q9UGQ2 172 aa14.63□□□□□ -0.07
PDZRN3-202ENST00000308537 LCE6AA0A183 80 aa14.62□□□□□ -0.07
PDZRN3-202ENST00000308537 PITX3O75364 302 aa14.62□□□□□ -0.07
PDZRN3-202ENST00000308537 DFFBO76075 338 aa14.62□□□□□ -0.07
PDZRN3-202ENST00000308537 CRYBB3P26998 211 aa14.62□□□□□ -0.07
PDZRN3-202ENST00000308537 SRPXP78539 464 aa14.62□□□□□ -0.07
PDZRN3-202ENST00000308537 LINC00299Q6ZSB3 139 aa14.62□□□□□ -0.07
PDZRN3-202ENST00000308537 Q6ZWC4 215 aa14.62□□□□□ -0.07
PDZRN3-202ENST00000308537 FAM24BQ8N5W8 94 aa14.62□□□□□ -0.07
PDZRN3-202ENST00000308537 RNASEH2CQ8TDP1 164 aaKnown RBP14.62□□□□□ -0.07
PDZRN3-202ENST00000308537 U3KQE9 123 aa14.62□□□□□ -0.07
PDZRN3-202ENST00000308537 IGKV3-7A0A075B6H7 116 aa14.61□□□□□ -0.07
PDZRN3-202ENST00000308537 IGHV3-66A0A0C4DH42 116 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms