RNA–Protein interactions for RNA: ENST00000301599.6

TMEM88-201, Transcript of transmembrane protein 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM88, Length 875 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88-201ENST00000301599 C20orf24Q9BUV8 137 aa13.65□□□□□ -0.22
TMEM88-201ENST00000301599 RETNQ9HD89 108 aa13.65□□□□□ -0.22
TMEM88-201ENST00000301599 F8W735 103 aaPredicted RBP13.64□□□□□ -0.23
TMEM88-201ENST00000301599 CCR6P51684 374 aa13.64□□□□□ -0.23
TMEM88-201ENST00000301599 PIGPP57054 158 aa13.64□□□□□ -0.23
TMEM88-201ENST00000301599 FCN2Q15485 313 aa13.64□□□□□ -0.23
TMEM88-201ENST00000301599 TERB2Q8NHR7 220 aa13.64□□□□□ -0.23
TMEM88-201ENST00000301599 MISP3Q96FF7 219 aa13.64□□□□□ -0.23
TMEM88-201ENST00000301599 SPAG8Q99932 426 aaPredicted RBP13.64□□□□□ -0.23
TMEM88-201ENST00000301599 LOC102724200A0A096LPH7 203 aaPredicted RBP13.63□□□□□ -0.23
TMEM88-201ENST00000301599 DISC1C4P0D8 188 aa13.63□□□□□ -0.23
TMEM88-201ENST00000301599 I3L2K1 104 aa13.63□□□□□ -0.23
TMEM88-201ENST00000301599 TSPAN4O14817 238 aa13.63□□□□□ -0.23
TMEM88-201ENST00000301599 NUPL2O15504 423 aaKnown RBP13.63□□□□□ -0.23
TMEM88-201ENST00000301599 PI3P19957 117 aa13.63□□□□□ -0.23
TMEM88-201ENST00000301599 FCGR2BP31994 310 aaPredicted RBP13.63□□□□□ -0.23
TMEM88-201ENST00000301599 RELQ04864 619 aaPredicted RBP13.63□□□□□ -0.23
TMEM88-201ENST00000301599 STEAP1BQ6NZ63 245 aa13.63□□□□□ -0.23
TMEM88-201ENST00000301599 ZNF114Q8NC26 417 aa13.63□□□□□ -0.23
TMEM88-201ENST00000301599 FAM110AQ9BQ89 295 aa13.63□□□□□ -0.23
TMEM88-201ENST00000301599 GGTLC1Q9BX51 225 aa13.63□□□□□ -0.23
TMEM88-201ENST00000301599 C3orf85A0A1B0GTC6 90 aa13.62□□□□□ -0.23
TMEM88-201ENST00000301599 C15orf62A8K5M9 175 aa13.62□□□□□ -0.23
TMEM88-201ENST00000301599 RAB3DO95716 219 aa13.62□□□□□ -0.23
TMEM88-201ENST00000301599 CD74P04233 296 aa13.62□□□□□ -0.23
TMEM88-201ENST00000301599 GIPP09681 153 aaPredicted RBP13.62□□□□□ -0.23
TMEM88-201ENST00000301599 RAP2BP61225 183 aa13.62□□□□□ -0.23
TMEM88-201ENST00000301599 IFITM2Q01629 132 aa13.62□□□□□ -0.23
TMEM88-201ENST00000301599 CCDC71LQ8N9Z2 235 aa13.62□□□□□ -0.23
TMEM88-201ENST00000301599 ZNF431Q8TF32 576 aaPredicted RBP13.62□□□□□ -0.23
TMEM88-201ENST00000301599 TP53RKQ96S44 253 aa13.62□□□□□ -0.23
TMEM88-201ENST00000301599 PRRT1Q99946 306 aa13.62□□□□□ -0.23
TMEM88-201ENST00000301599 MT-CO2P00403 227 aa13.61□□□□□ -0.23
TMEM88-201ENST00000301599 SNCAP37840 140 aa13.61□□□□□ -0.23
TMEM88-201ENST00000301599 SCGB2B2Q4G0G5 96 aa13.61□□□□□ -0.23
TMEM88-201ENST00000301599 SMPXQ9UHP9 88 aa13.61□□□□□ -0.23
TMEM88-201ENST00000301599 TENM2Q9NT68 2774 aa13.61□□□□□ -0.23
TMEM88-201ENST00000301599 IGHV3OR16-8A0A075B7F1 116 aa13.6□□□□□ -0.23
TMEM88-201ENST00000301599 LCE6AA0A183 80 aa13.6□□□□□ -0.23
TMEM88-201ENST00000301599 ZNF207O43670 478 aaKnown RBP13.6□□□□□ -0.23
TMEM88-201ENST00000301599 B3GALNT1O75752 331 aa13.6□□□□□ -0.23
TMEM88-201ENST00000301599 YIF1AO95070 293 aa13.6□□□□□ -0.23
TMEM88-201ENST00000301599 IFNA17P01571 189 aa13.6□□□□□ -0.23
TMEM88-201ENST00000301599 IGKV1-5P01602 117 aa13.6□□□□□ -0.23
TMEM88-201ENST00000301599 AKR1C2P52895 323 aa13.6□□□□□ -0.23
TMEM88-201ENST00000301599 IZUMO4Q1ZYL8 232 aa13.6□□□□□ -0.23
TMEM88-201ENST00000301599 OR4D10Q8NGI6 311 aa13.6□□□□□ -0.23
TMEM88-201ENST00000301599 OR4C16Q8NGL9 310 aa13.6□□□□□ -0.23
TMEM88-201ENST00000301599 PINX1Q96BK5 328 aaKnown RBP13.6□□□□□ -0.23
TMEM88-201ENST00000301599 OR4C46A6NHA9 309 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 INS-IGF2F8WCM5 200 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 GNG7O60262 68 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 CTSDP07339 412 aaPredicted RBP13.59□□□□□ -0.23
TMEM88-201ENST00000301599 P0C879 139 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 SUB1P53999 127 aaKnown RBP eCLIP13.59□□□□□ -0.23
TMEM88-201ENST00000301599 SP6Q3SY56 376 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 SLC35G3Q8N808 338 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 OR11H7Q8NGC8 314 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 OR13C8Q8NGS7 320 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 MARCH1Q8TCQ1 289 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 RRNAD1Q96FB5 475 aaKnown RBP13.59□□□□□ -0.23
TMEM88-201ENST00000301599 SCGB3A2Q96PL1 93 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 PDCD10Q9BUL8 212 aa13.59□□□□□ -0.23
TMEM88-201ENST00000301599 TRAV14DV4A0A0A6YYC5 116 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 IGHV7-4-1A0A0J9YVY3 117 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 ST8SIA3O43173 380 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 IGHV3-48P01763 117 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 NPBWR1P48145 328 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 SPINK9Q5DT21 86 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 TMEM116Q8NCL8 245 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 OR10C1Q96KK4 312 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 OVOL2Q9BRP0 275 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 RHPN1-AS1Q9BWJ2 59 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 UBQLN2Q9UHD9 624 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 HSPB11Q9Y547 144 aa13.58□□□□□ -0.24
TMEM88-201ENST00000301599 CHEK1O14757 476 aa13.57□□□□□ -0.24
TMEM88-201ENST00000301599 UCP1P25874 307 aa13.57□□□□□ -0.24
TMEM88-201ENST00000301599 APOC4P55056 127 aa13.57□□□□□ -0.24
TMEM88-201ENST00000301599 CMC4P56277 68 aaPredicted RBP13.57□□□□□ -0.24
TMEM88-201ENST00000301599 ENY2Q9NPA8 101 aa13.57□□□□□ -0.24
TMEM88-201ENST00000301599 C14orf166Q9Y224 244 aaKnown RBP13.57□□□□□ -0.24
TMEM88-201ENST00000301599 UBE2CO00762 179 aa13.56□□□□□ -0.24
TMEM88-201ENST00000301599 FGL1Q08830 312 aa13.56□□□□□ -0.24
TMEM88-201ENST00000301599 C9orf62Q8N4C0 152 aa13.56□□□□□ -0.24
TMEM88-201ENST00000301599 RNASE11Q8TAA1 199 aaKnown RBP13.56□□□□□ -0.24
TMEM88-201ENST00000301599 ZNF414Q96IQ9 312 aa13.56□□□□□ -0.24
TMEM88-201ENST00000301599 RNF2Q99496 336 aa13.56□□□□□ -0.24
TMEM88-201ENST00000301599 GINS3Q9BRX5 216 aa13.56□□□□□ -0.24
TMEM88-201ENST00000301599 RTBDNQ9BSG5 229 aaPredicted RBP13.56□□□□□ -0.24
TMEM88-201ENST00000301599 TMEM222Q9H0R3 208 aa13.56□□□□□ -0.24
TMEM88-201ENST00000301599 MGAT4CQ9UBM8 478 aa13.56□□□□□ -0.24
TMEM88-201ENST00000301599 DYNC2H1Q8NCM8 4307 aaKnown RBP13.55□□□□□ -0.24
TMEM88-201ENST00000301599 TEX13DA0A0J9YY54 714 aaPredicted RBP13.55□□□□□ -0.24
TMEM88-201ENST00000301599 CORTO00230 105 aa13.55□□□□□ -0.24
TMEM88-201ENST00000301599 CDS2O95674 445 aa13.55□□□□□ -0.24
TMEM88-201ENST00000301599 TMEM50AO95807 157 aa13.55□□□□□ -0.24
TMEM88-201ENST00000301599 IFNA7P01567 189 aa13.55□□□□□ -0.24
TMEM88-201ENST00000301599 CD5P06127 495 aa13.55□□□□□ -0.24
TMEM88-201ENST00000301599 UBE2MP61081 183 aaKnown RBP13.55□□□□□ -0.24
TMEM88-201ENST00000301599 SURF2Q15527 256 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms