RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 OR4X2Q8NGF9 303 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 DTD1Q8TEA8 209 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 C4orf3Q8WVX3 66 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 DUX3Q96PT4 197 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 OR5B12Q96R08 314 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 GON7Q9BXV9 100 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 FNDC4Q9H6D8 234 aaPredicted RBP4.54□□□□□ -1.68
SSX3-201ENST00000298396 PLEKHA3Q9HB20 300 aa4.54□□□□□ -1.68
SSX3-201ENST00000298396 TSSC4Q9Y5U2 329 aaPredicted RBP4.54□□□□□ -1.68
SSX3-201ENST00000298396 IGHV4OR15-8A0A075B7B6 117 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 A0A087WW49 117 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 C13orf42A0A1B0GVH6 325 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 FAM223BA6NKX1 122 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 PMS2P5A8MQ11 134 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 CEBPZOSA8MTT3 80 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 FAM25EA8MYX2 175 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 G3V3Q6 166 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 H0YIZ8 118 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 K7EPK0 472 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 BMPR1BO00238 502 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 SYNGR2O43760 224 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 IFNA21P01568 189 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 IGHV3-48P01763 117 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 LGALS1P09382 135 aaKnown RBP4.53□□□□□ -1.68
SSX3-201ENST00000298396 RAB32Q13637 225 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 FHL3Q13643 280 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 EXOSC2Q13868 293 aaKnown RBP4.53□□□□□ -1.68
SSX3-201ENST00000298396 ODF1Q14990 250 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 C15orf32Q32M92 178 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 C2orf83Q53S99 150 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 KHDC1LQ5JSQ8 128 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 ZNF343Q6P1L6 599 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 Q6ZNX1 250 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 HSD17B13Q7Z5P4 300 aaPredicted RBP4.53□□□□□ -1.68
SSX3-201ENST00000298396 HAPLN4Q86UW8 402 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 FAM223AQ8IWN6 122 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 NECAP1Q8NC96 275 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 KLHL30-AS1Q8NEE0 82 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 OR1P1Q8NH06 330 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 ZNF502Q8TBZ5 544 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 UBE2E2Q96LR5 201 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 C2orf50Q96LR7 162 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 SLA2Q9H6Q3 261 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 GPN1Q9HCN4 374 aaPredicted RBP4.53□□□□□ -1.68
SSX3-201ENST00000298396 HEYLQ9NQ87 328 aaPredicted RBP4.53□□□□□ -1.68
SSX3-201ENST00000298396 ZNF355PQ9NSJ1 428 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 GSKIPQ9P0R6 139 aa4.53□□□□□ -1.68
SSX3-201ENST00000298396 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.52□□□□□ -1.69
SSX3-201ENST00000298396 TRAV14DV4A0A0A6YYC5 116 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 A0A1B0GVG6 124 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 C5orf51A6NDU8 294 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 PPP5D1E7EU14 171 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 H3BP45 60 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 WRBO00258 174 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 SSNA1O43805 119 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 SSSCA1O60232 199 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 SCGB1D2O95969 90 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 MT-CO2P00403 227 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 NPY1RP25929 384 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 NKX2-1P43699 371 aaPredicted RBP4.52□□□□□ -1.69
SSX3-201ENST00000298396 RRAS2P62070 204 aaPredicted RBP4.52□□□□□ -1.69
SSX3-201ENST00000298396 ARL16Q0P5N6 197 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 Q5BKY6 102 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 SLC25A24Q6NUK1 477 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 TMEM65Q6PI78 240 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 TMEM14EPQ6UXP3 125 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 GSG1LQ6UXU4 331 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 SLC24A4Q8NFF2 622 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 SCARB1Q8WTV0 552 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 BSCL2Q96G97 398 aaPredicted RBP4.52□□□□□ -1.69
SSX3-201ENST00000298396 SMIM8Q96KF7 97 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 CHRDL1Q9BU40 450 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 PDCD10Q9BUL8 212 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 RNF126Q9BV68 326 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 NMES1Q9C002 83 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 ZFP57Q9NU63 452 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 MGAT4CQ9UBM8 478 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 FBN3Q75N90 2809 aa4.52□□□□□ -1.69
SSX3-201ENST00000298396 AGRNO00468 2067 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 IGKV1D-37A0A075B6S9 117 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 PIGBOS1A0A0B4J2F0 54 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 IGSF23A1L1A6 192 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 CCL24O00175 119 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 MED6O75586 246 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 DEDDO75618 318 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 DEFA4P12838 97 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 HIST1H1BP16401 226 aaKnown RBP4.51□□□□□ -1.69
SSX3-201ENST00000298396 EDN2P20800 178 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 HTR2BP41595 481 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 ERHP84090 104 aaKnown RBP4.51□□□□□ -1.69
SSX3-201ENST00000298396 ATP5G2Q06055 141 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 PRSS54Q6PEW0 395 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 OR11H1Q8NG94 326 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 VN1R17PQ8TDU5 208 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 USMG5Q96IX5 58 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 KRTAP3-1Q9BYR8 98 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 MED28Q9H204 178 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 ENY2Q9NPA8 101 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 ZC4H2Q9NQZ6 224 aa4.51□□□□□ -1.69
SSX3-201ENST00000298396 OR5AC2Q9NZP5 309 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms