RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CYB5R2Q6BCY4 276 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 ZNF600Q6ZNG1 722 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 LHFPL4Q7Z7J7 247 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 H3BRM9 83 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 LRTM2Q8N967 370 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 FAM186AA6NE01 2351 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 PRR32B1ATL7 298 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 OR10W1Q8NGF6 305 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 SLC50A1Q9BRV3 221 aa14.35□□□□□ -0.11
SHANK1-201ENST00000293441 A0A0A6YYD4 124 aa14.34□□□□□ -0.11
SHANK1-201ENST00000293441 SAP30O75446 220 aa14.34□□□□□ -0.11
SHANK1-201ENST00000293441 NDUFA3O95167 84 aa14.34□□□□□ -0.11
SHANK1-201ENST00000293441 CDX1P47902 265 aaPredicted RBP14.34□□□□□ -0.11
SHANK1-201ENST00000293441 RTTNQ86VV8 2226 aa14.34□□□□□ -0.11
SHANK1-201ENST00000293441 TRAV41A0A0B4J266 112 aa14.34□□□□□ -0.11
SHANK1-201ENST00000293441 DUSP14O95147 198 aaKnown RBP14.34□□□□□ -0.11
SHANK1-201ENST00000293441 ZNF324BQ6AW86 544 aaPredicted RBP14.34□□□□□ -0.11
SHANK1-201ENST00000293441 PLP1P60201 277 aa14.34□□□□□ -0.11
SHANK1-201ENST00000293441 FAM166AQ6J272 317 aa14.34□□□□□ -0.11
SHANK1-201ENST00000293441 TRGV4A0A0C4DH28 118 aa14.34□□□□□ -0.11
SHANK1-201ENST00000293441 TMEM42Q69YG0 159 aa14.34□□□□□ -0.11
SHANK1-201ENST00000293441 BRD3OSQ6XYD6 125 aa14.33□□□□□ -0.11
SHANK1-201ENST00000293441 FABP5P3A8MUU1 101 aa14.33□□□□□ -0.12
SHANK1-201ENST00000293441 PYYP10082 97 aa14.33□□□□□ -0.12
SHANK1-201ENST00000293441 DUTP33316 252 aaKnown RBP14.33□□□□□ -0.12
SHANK1-201ENST00000293441 KIR3DL3Q8N743 410 aa14.33□□□□□ -0.12
SHANK1-201ENST00000293441 EFNB1P98172 346 aa14.33□□□□□ -0.12
SHANK1-201ENST00000293441 C20orf204Q6ZNR8 217 aa14.33□□□□□ -0.12
SHANK1-201ENST00000293441 TMEM178BH3BS89 294 aa14.33□□□□□ -0.12
SHANK1-201ENST00000293441 CRYGSP22914 178 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 FAM131CQ96AQ9 280 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 ZDBF2Q9HCK1 2354 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 HIGD1CA8MV81 97 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 RNASE7Q9H1E1 156 aaKnown RBP14.32□□□□□ -0.12
SHANK1-201ENST00000293441 ATP5LO75964 103 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 NAT1P18440 290 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 SDK2Q58EX2 2172 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 TMEM50AO95807 157 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 SIGLEC15Q6ZMC9 328 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 SLC25A15Q9Y619 301 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 PPIFP30405 207 aaKnown RBP14.32□□□□□ -0.12
SHANK1-201ENST00000293441 PSMG4Q5JS54 123 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 PMCHL2Q9BQD1 86 aa14.32□□□□□ -0.12
SHANK1-201ENST00000293441 ASCL2Q99929 193 aa14.31□□□□□ -0.12
SHANK1-201ENST00000293441 SRP19P09132 144 aaKnown RBP14.31□□□□□ -0.12
SHANK1-201ENST00000293441 HOXA5P20719 270 aa14.31□□□□□ -0.12
SHANK1-201ENST00000293441 PRCDQ00LT1 54 aa14.31□□□□□ -0.12
SHANK1-201ENST00000293441 DEFB121Q5J5C9 76 aa14.31□□□□□ -0.12
SHANK1-201ENST00000293441 IGHV1-8P0DP01 117 aa14.31□□□□□ -0.12
SHANK1-201ENST00000293441 CNTFRP26992 372 aa14.31□□□□□ -0.12
SHANK1-201ENST00000293441 ORMDL3Q8N138 153 aa14.31□□□□□ -0.12
SHANK1-201ENST00000293441 TNFRSF14Q92956 283 aa14.31□□□□□ -0.12
SHANK1-201ENST00000293441 NABP1Q96AH0 204 aa14.31□□□□□ -0.12
SHANK1-201ENST00000293441 TRAV21A0A0B4J279 112 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 DPRXA6NFQ7 191 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 ZNF98A6NK75 572 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 ST20Q9HBF5 79 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 IZUMO1RA6ND01 250 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 SNAI2O43623 268 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 ZNF362Q5T0B9 420 aaPredicted RBP14.3□□□□□ -0.12
SHANK1-201ENST00000293441 NR2C2APQ86WQ0 139 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 ST6GALNAC3Q8NDV1 305 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 KIF26BQ2KJY2 2108 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 SPTA1P02549 2419 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 ALPK2Q86TB3 2170 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 ZNF415Q09FC8 603 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 MDS2Q8NDY4 140 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 B4DSR2 109 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 Q6AWC8 147 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 C17orf82Q86X59 251 aaPredicted RBP14.3□□□□□ -0.12
SHANK1-201ENST00000293441 MST1P26927 711 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 IFITM2Q01629 132 aa14.3□□□□□ -0.12
SHANK1-201ENST00000293441 IGKV1-12A0A0C4DH73 117 aa14.29□□□□□ -0.12
SHANK1-201ENST00000293441 IGKV1D-12P01611 117 aa14.29□□□□□ -0.12
SHANK1-201ENST00000293441 SMIM13P0DJ93 91 aa14.29□□□□□ -0.12
SHANK1-201ENST00000293441 TPTE2P1Q5T6R2 138 aa14.29□□□□□ -0.12
SHANK1-201ENST00000293441 EPDR1Q9UM22 224 aa14.29□□□□□ -0.12
SHANK1-201ENST00000293441 H3BUX3 64 aa14.29□□□□□ -0.12
SHANK1-201ENST00000293441 GFI1BQ5VTD9 330 aa14.29□□□□□ -0.12
SHANK1-201ENST00000293441 MRPL16Q9NX20 251 aaKnown RBP14.29□□□□□ -0.12
SHANK1-201ENST00000293441 SRRM5B3KS81 715 aa14.29□□□□□ -0.12
SHANK1-201ENST00000293441 TBL2Q9Y4P3 447 aaKnown RBP14.29□□□□□ -0.12
SHANK1-201ENST00000293441 IGKV1D-8A0A087WSZ0 117 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 IGHV1-3A0A0C4DH29 117 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 C10orf55Q5SWW7 151 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 LDLRAD4O15165 306 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 ERVK11-1P61568 191 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 C15orf32Q32M92 178 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 UBE2DNLQ8IWF7 75 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 MBNL3Q9NUK0 354 aaKnown RBP14.28□□□□□ -0.12
SHANK1-201ENST00000293441 ZNF257Q9Y2Q1 563 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.28□□□□□ -0.12
SHANK1-201ENST00000293441 CD177Q8N6Q3 437 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 VGLL1Q99990 258 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 SOX21Q9Y651 276 aaPredicted RBP14.28□□□□□ -0.12
SHANK1-201ENST00000293441 CRPP02741 224 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 FAM209BQ5JX69 171 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 RNF222A6NCQ9 220 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 CLPSP04118 112 aa14.28□□□□□ -0.12
SHANK1-201ENST00000293441 JKAMPQ9P055 326 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms