RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 DNM1P46Q6ZS02 220 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 TMEM144Q7Z5S9 345 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 NABP1Q96AH0 204 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 SEMA5BQ9P283 1151 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 RRN3P1Q2M238 152 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 ZIC4Q8N9L1 334 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 OR5A1Q8NGJ0 315 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 ORAOV1Q8WV07 137 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 TRBV24-1A0A075B6N3 115 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 MYOD1P15172 320 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 CRYGSP22914 178 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 GLRXP35754 106 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 MRPL14Q6P1L8 145 aaKnown RBP12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 ANAPC13Q9BS18 74 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 GEMIN7Q9H840 131 aaKnown RBP12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 TMEM50AO95807 157 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 LINC00271P0C7V0 271 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 SP9P0CG40 484 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 CD69Q07108 199 aa12.75□□□□□ -0.37
SHROOM4-201ENST00000289292 RP1P56715 2156 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 hDV102S1A0JD36 115 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 FAM181BA6NEQ2 426 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 CACNG7P62955 275 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 TREML4Q6UXN2 200 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 NUDT10Q8NFP7 164 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 MRAP2Q96G30 205 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 PNRC2Q9NPJ4 139 aaKnown RBP12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 TRAV3A0A0B4J244 114 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 TRGV3P03979 118 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 TSPOP30536 169 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 LCN12Q6JVE5 192 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 LTBP1Q14766 1721 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 DDB2Q92466 427 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 LSM4Q9Y4Z0 139 aaKnown RBP12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 NPFFO15130 113 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 FOXL1Q12952 345 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 MGST2Q99735 147 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 ZSWIM8A7E2V4 1837 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 IGKV3D-20A0A0C4DH25 116 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 QRFPP83859 136 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 CIRBPQ14011 172 aaKnown RBP12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 RNASEH2CQ8TDP1 164 aaKnown RBP12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 C2orf88Q9BSF0 95 aa12.74□□□□□ -0.37
SHROOM4-201ENST00000289292 TM4SF5O14894 197 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 LILRA1O75019 489 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 SFTPCP11686 197 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 DUTP33316 252 aaKnown RBP12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 ASIPP42127 132 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 CFHR1Q03591 330 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 OTORQ9NRC9 128 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 OSTCQ9NRP0 149 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 TIMM23BQ5SRD1 257 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 J3QW42 95 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 CLEC2AQ6UVW9 174 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 ASCL2Q99929 193 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 TMEM242Q9NWH2 141 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 MCRIP2Q9BUT9 160 aaKnown RBP12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 HEATR5BQ9P2D3 2071 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 RPP25LQ8N5L8 163 aaKnown RBP12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 ARPC1AQ92747 370 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 FGF11Q92914 225 aa12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 SEPSECSQ9HD40 501 aaKnown RBP12.73□□□□□ -0.37
SHROOM4-201ENST00000289292 YPEL1O60688 119 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 IGKV1-5P01602 117 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 MST1LQ2TV78 715 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 FAM166AQ6J272 317 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 OR13C6PQ8NH95 151 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 COQ2Q96H96 371 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 YPEL2Q96QA6 119 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 SPRR3Q9UBC9 169 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 KIF26BQ2KJY2 2108 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 TPTE2P1Q5T6R2 138 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 A0A087X0K7 114 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 ATP5LO75964 103 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 PSG1P11464 419 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 TMEM30BQ3MIR4 351 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 NRN1LQ496H8 165 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 FAM106AQ4KMX7 169 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 SAMD5Q5TGI4 173 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 WFDC12Q8WWY7 111 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 C21orf62Q9NYP8 219 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 PTPRDP23468 1912 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 SELLP14151 372 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 TDGF1P3P51864 188 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 GTF3AQ92664 365 aaKnown RBP12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 GGTLC1Q9BX51 225 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 FREM3P0C091 2139 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 A0A1B0GUS0 222 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 ATP5IP56385 69 aaPredicted RBP12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 LINC01551Q86U37 167 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 LOXL4Q96JB6 756 aa12.72□□□□□ -0.37
SHROOM4-201ENST00000289292 A0A0G2JRQ6 117 aa12.71□□□□□ -0.37
SHROOM4-201ENST00000289292 TCRBV4S1A1TA0A5B7 111 aa12.71□□□□□ -0.37
SHROOM4-201ENST00000289292 METRNQ9UJH8 293 aa12.71□□□□□ -0.37
SHROOM4-201ENST00000289292 CEACAM4O75871 244 aa12.71□□□□□ -0.37
SHROOM4-201ENST00000289292 SUMO2P61956 95 aaKnown RBP12.71□□□□□ -0.37
SHROOM4-201ENST00000289292 CACNG8Q8WXS5 425 aa12.71□□□□□ -0.37
SHROOM4-201ENST00000289292 PRR19A6NJB7 356 aa12.71□□□□□ -0.37
SHROOM4-201ENST00000289292 E9PLN8 166 aa12.71□□□□□ -0.37
SHROOM4-201ENST00000289292 C10orf55Q5SWW7 151 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms