RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 Q6ZSV7 163 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 SCGB1C1Q8TD33 95 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 RNF141Q8WVD5 230 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 CACNG8Q8WXS5 425 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 WDR83OSQ9Y284 106 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 FNDC10F2Z333 226 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 CFHR3Q02985 330 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 RSG1Q9BU20 258 aa14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 FNDC4Q9H6D8 234 aaPredicted RBP14.8□□□□□ -0.04
PDLIM3-202ENST00000284770 HIST1H1BP16401 226 aaKnown RBP14.79□□□□□ -0.04
PDLIM3-202ENST00000284770 MLANAQ16655 118 aa14.79□□□□□ -0.04
PDLIM3-202ENST00000284770 NDUFA5Q16718 116 aa14.79□□□□□ -0.04
PDLIM3-202ENST00000284770 ETFRF1Q6IPR1 90 aa14.79□□□□□ -0.04
PDLIM3-202ENST00000284770 TREML4Q6UXN2 200 aa14.79□□□□□ -0.04
PDLIM3-202ENST00000284770 OR2G3Q8NGZ4 309 aa14.79□□□□□ -0.04
PDLIM3-202ENST00000284770 OR2T6Q8NHC8 308 aa14.79□□□□□ -0.04
PDLIM3-202ENST00000284770 PSMG3Q9BT73 122 aaPredicted RBP14.79□□□□□ -0.04
PDLIM3-202ENST00000284770 ZNF355PQ9NSJ1 428 aa14.79□□□□□ -0.04
PDLIM3-202ENST00000284770 THYN1Q9P016 225 aa14.79□□□□□ -0.04
PDLIM3-202ENST00000284770 TRBV9A0A0B4J1U6 114 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 I3L2K1 104 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 BRI3O95415 125 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 FGF7P21781 194 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 CENPVQ7Z7K6 275 aaPredicted RBP14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 LRRC20Q8TCA0 184 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 SERTAD4Q9NUC0 356 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 MAST4O15021 2626 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 H3BUA1 57 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 MT-CO2P00403 227 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 SLC16A13Q7RTY0 426 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 SLC7A5P1Q8MH63 180 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 NPVFQ9HCQ7 196 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 LSM4Q9Y4Z0 139 aaKnown RBP14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 TIMM9Q9Y5J7 89 aa14.78□□□□□ -0.04
PDLIM3-202ENST00000284770 SMCO3A2RU48 225 aa14.77□□□□□ -0.05
PDLIM3-202ENST00000284770 LINC00862A6NCI5 91 aa14.77□□□□□ -0.05
PDLIM3-202ENST00000284770 K7EIM0 57 aa14.77□□□□□ -0.05
PDLIM3-202ENST00000284770 IGLV1-40P01703 118 aa14.77□□□□□ -0.05
PDLIM3-202ENST00000284770 GAMTQ14353 236 aa14.77□□□□□ -0.05
PDLIM3-202ENST00000284770 BTNL8Q6UX41 500 aa14.77□□□□□ -0.05
PDLIM3-202ENST00000284770 TMEM182Q6ZP80 229 aaPredicted RBP14.77□□□□□ -0.05
PDLIM3-202ENST00000284770 NPCDR1Q9BY65 106 aa14.77□□□□□ -0.05
PDLIM3-202ENST00000284770 MPDU1O75352 247 aa14.76□□□□□ -0.05
PDLIM3-202ENST00000284770 OR2J3O76001 311 aa14.76□□□□□ -0.05
PDLIM3-202ENST00000284770 NDUFB8O95169 186 aa14.76□□□□□ -0.05
PDLIM3-202ENST00000284770 NECAP1Q8NC96 275 aa14.76□□□□□ -0.05
PDLIM3-202ENST00000284770 CXorf58Q96LI9 332 aa14.76□□□□□ -0.05
PDLIM3-202ENST00000284770 MS4A10Q96PG2 267 aa14.76□□□□□ -0.05
PDLIM3-202ENST00000284770 FBXL7Q9UJT9 491 aa14.76□□□□□ -0.05
PDLIM3-202ENST00000284770 IGHV3-21A0A0B4J1V1 117 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 IGHV3-48P01763 117 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 IGHG4P01861 327 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 RAB5CP51148 216 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 SLC35B1P78383 322 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 RHOGP84095 191 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 ZNF329Q86UD4 541 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 SAT2Q96F10 170 aaPredicted RBP14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 SLC35E1Q96K37 410 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 C16orf95Q9H693 158 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 ZNF705EA8MWA4 302 aaPredicted RBP14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 UMAD1C9J7I0 102 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 SERF2P84101 59 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 TMEM144Q7Z5S9 345 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 MGST2Q99735 147 aa14.75□□□□□ -0.05
PDLIM3-202ENST00000284770 PSMB11A5LHX3 300 aa14.74□□□□□ -0.05
PDLIM3-202ENST00000284770 FHITP49789 147 aa14.74□□□□□ -0.05
PDLIM3-202ENST00000284770 AKR1C1Q04828 323 aa14.74□□□□□ -0.05
PDLIM3-202ENST00000284770 C15orf32Q32M92 178 aa14.74□□□□□ -0.05
PDLIM3-202ENST00000284770 TEPPQ6URK8 271 aa14.74□□□□□ -0.05
PDLIM3-202ENST00000284770 TMEM116Q8NCL8 245 aa14.74□□□□□ -0.05
PDLIM3-202ENST00000284770 ACY3Q96HD9 319 aa14.74□□□□□ -0.05
PDLIM3-202ENST00000284770 MRPL36Q9P0J6 103 aaKnown RBP14.74□□□□□ -0.05
PDLIM3-202ENST00000284770 IGKV1OR2-108A0A075B7D4 117 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 TMEM89A2RUT3 159 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 FAM223BA6NKX1 122 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 NDUFA7O95182 113 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 TRGV3P03979 118 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 TEX38Q6PEX7 206 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 FAM223AQ8IWN6 122 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 VN1R17PQ8TDU5 208 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 NPIPB3Q92617 1050 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 PF4V1P10720 104 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 PSMB8P28062 276 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 RAB9AP51151 201 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 RND2P52198 227 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 DEFA5Q01523 94 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 C10orf99Q6UWK7 81 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 OR4X1Q8NH49 305 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 GGTLC1Q9BX51 225 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 KLK15Q9H2R5 256 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 MED9Q9NWA0 146 aa14.73□□□□□ -0.05
PDLIM3-202ENST00000284770 MFSD2BA6NFX1 497 aa14.72□□□□□ -0.05
PDLIM3-202ENST00000284770 C17orf112F2Z3M2 114 aa14.72□□□□□ -0.05
PDLIM3-202ENST00000284770 TPPP2P59282 170 aa14.72□□□□□ -0.05
PDLIM3-202ENST00000284770 AKR1C8PQ5T2L2 129 aa14.72□□□□□ -0.05
PDLIM3-202ENST00000284770 PXDC1Q5TGL8 231 aa14.72□□□□□ -0.05
PDLIM3-202ENST00000284770 ACSM6Q6P461 480 aa14.72□□□□□ -0.05
PDLIM3-202ENST00000284770 Q6ZRG5 221 aa14.72□□□□□ -0.05
PDLIM3-202ENST00000284770 ZNF709Q8N972 641 aa14.72□□□□□ -0.05
PDLIM3-202ENST00000284770 LINC01006Q8NI28 216 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms