RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 PRSS8Q16651 343 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 LYPD2Q6UXB3 125 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 REC114Q7Z4M0 266 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 OR1L4Q8NGR5 311 aa20.24■□□□□ 0.83
ROM1-201ENST00000278833 NOL4LQ96MY1 436 aaPredicted RBP20.24■□□□□ 0.83
ROM1-201ENST00000278833 OR7C2O60412 319 aa20.23■□□□□ 0.83
ROM1-201ENST00000278833 ADMP35318 185 aa20.23■□□□□ 0.83
ROM1-201ENST00000278833 VMA21Q3ZAQ7 101 aa20.23■□□□□ 0.83
ROM1-201ENST00000278833 DMRTC2Q8IXT2 367 aaPredicted RBP20.23■□□□□ 0.83
ROM1-201ENST00000278833 IGF2BP2-AS1Q96M15 143 aa20.23■□□□□ 0.83
ROM1-201ENST00000278833 ZMAT5Q9UDW3 170 aaKnown RBP20.23■□□□□ 0.83
ROM1-201ENST00000278833 ISLRO14498 428 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 RD3LP0DJH9 198 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 CRYBB3P26998 211 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 LGALS7P47929 136 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 RPL19P84098 196 aaKnown RBP20.22■□□□□ 0.83
ROM1-201ENST00000278833 WT1-ASQ06250 92 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 ZCCHC24Q8N2G6 241 aaKnown RBP20.22■□□□□ 0.83
ROM1-201ENST00000278833 H1FXQ92522 213 aaKnown RBP20.22■□□□□ 0.83
ROM1-201ENST00000278833 SLC25A2Q9BXI2 301 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 DNAJC4Q9NNZ3 241 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 TNCP24821 2201 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 TCRBV4S1A1TA0A5B7 111 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 PPOXP50336 477 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 TAS2R60P59551 318 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 TGIF2LXQ8IUE1 241 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 MRPL41Q8IXM3 137 aaKnown RBP20.22■□□□□ 0.83
ROM1-201ENST00000278833 MMD2Q8IY49 270 aa20.22■□□□□ 0.83
ROM1-201ENST00000278833 TIGITQ495A1 244 aa20.21■□□□□ 0.83
ROM1-201ENST00000278833 CCL17Q92583 94 aa20.21■□□□□ 0.83
ROM1-201ENST00000278833 C14orf144Q96I85 54 aa20.21■□□□□ 0.83
ROM1-201ENST00000278833 E7EQL1 145 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 E7EUB6 86 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 IGHV1-8P0DP01 117 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 GATA2P23769 480 aaPredicted RBP20.2■□□□□ 0.82
ROM1-201ENST00000278833 BPIFB3P59826 476 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 MLANAQ16655 118 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 IQCJQ1A5X6 159 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 WFIKKN1Q96NZ8 548 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 GNB1LQ9BYB4 327 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 IGKV1D-37A0A075B6S9 117 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 IGLV2-8P01709 118 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 MT-ND6P03923 174 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 HNF1AP20823 631 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 ERVFC1-1P60608 527 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 MRGPRG-AS1Q2M3A8 158 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 ZGRF1Q86YA3 2104 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 TEX45Q8NA69 505 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 FNDC4Q9H6D8 234 aaPredicted RBP20.2■□□□□ 0.82
ROM1-201ENST00000278833 DYNLRB1Q9NP97 96 aa20.2■□□□□ 0.82
ROM1-201ENST00000278833 CRYGCP07315 174 aa20.19■□□□□ 0.82
ROM1-201ENST00000278833 REG1BP48304 166 aa20.19■□□□□ 0.82
ROM1-201ENST00000278833 OR2T6Q8NHC8 308 aa20.19■□□□□ 0.82
ROM1-201ENST00000278833 CDC42EP3Q9UKI2 254 aa20.19■□□□□ 0.82
ROM1-201ENST00000278833 SLC17A3O00476 420 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 C11orf42Q8N5U0 333 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 TMEM133Q9H2Q1 129 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 B9A039 149 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 RAB4BP61018 213 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 CX3CL1P78423 397 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 RBPJQ06330 500 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 Q0VG73 95 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 DIAPH2-AS1Q14236 149 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 ETFRF1Q6IPR1 90 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 WDR73Q6P4I2 378 aa20.18■□□□□ 0.82
ROM1-201ENST00000278833 MRPL18Q9H0U6 180 aaKnown RBP20.18■□□□□ 0.82
ROM1-201ENST00000278833 RBP4P02753 201 aa20.17■□□□□ 0.82
ROM1-201ENST00000278833 COL8A2P25067 703 aa20.17■□□□□ 0.82
ROM1-201ENST00000278833 APOBEC3AP31941 199 aaPredicted RBP20.17■□□□□ 0.82
ROM1-201ENST00000278833 UBE2L3P68036 154 aaKnown RBP20.17■□□□□ 0.82
ROM1-201ENST00000278833 PAFAH1B2P68402 229 aa20.17■□□□□ 0.82
ROM1-201ENST00000278833 OR1L6Q8NGR2 347 aa20.17■□□□□ 0.82
ROM1-201ENST00000278833 A0A1W2PPI3 338 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 COX7A2P2O60397 106 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 CRYGBP07316 175 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 CBLN1P23435 193 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 C10orf113Q5VZT2 155 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 VKORC1Q9BQB6 163 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 IGHV1-69-2A0A0G2JMI3 117 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 A8MWP6 167 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 SUMO1P63165 101 aaKnown RBP20.16■□□□□ 0.82
ROM1-201ENST00000278833 ZNF664Q8N3J9 261 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 BEND2Q8NDZ0 799 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 OR5AU1Q8NGC0 362 aa20.16■□□□□ 0.82
ROM1-201ENST00000278833 POLEQ07864 2286 aa20.15■□□□□ 0.82
ROM1-201ENST00000278833 FAM231DQ6ZW35 169 aa20.15■□□□□ 0.82
ROM1-201ENST00000278833 TMEM256Q8N2U0 113 aa20.15■□□□□ 0.82
ROM1-201ENST00000278833 TP53TG3Q9ULZ0 132 aa20.15■□□□□ 0.82
ROM1-201ENST00000278833 SMIM27A0A1W2PRY6 76 aa20.14■□□□□ 0.81
ROM1-201ENST00000278833 IGLC7A0M8Q6 106 aa20.14■□□□□ 0.81
ROM1-201ENST00000278833 OR5I1Q13606 314 aa20.14■□□□□ 0.81
ROM1-201ENST00000278833 LBHQ53QV2 105 aaPredicted RBP20.14■□□□□ 0.81
ROM1-201ENST00000278833 C10orf55Q5SWW7 151 aa20.14■□□□□ 0.81
ROM1-201ENST00000278833 PATE2Q6UY27 113 aa20.14■□□□□ 0.81
ROM1-201ENST00000278833 STXBP6Q8NFX7 210 aa20.14■□□□□ 0.81
ROM1-201ENST00000278833 CMTM2Q8TAZ6 248 aa20.14■□□□□ 0.81
ROM1-201ENST00000278833 NPIPB3Q92617 1050 aa20.14■□□□□ 0.81
ROM1-201ENST00000278833 ZNF355PQ9NSJ1 428 aa20.14■□□□□ 0.81
ROM1-201ENST00000278833 IGLV1-47P01700 117 aa20.13■□□□□ 0.81
ROM1-201ENST00000278833 MORN5Q5VZ52 161 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms