RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 ID1P41134 155 aa4.85□□□□□ -1.63
VCAN-201ENST00000265077 CCL20P78556 96 aa4.85□□□□□ -1.63
VCAN-201ENST00000265077 C9orf50Q5SZB4 431 aa4.85□□□□□ -1.63
VCAN-201ENST00000265077 CT55Q8WUE5 264 aa4.85□□□□□ -1.63
VCAN-201ENST00000265077 LTBP1Q14766 1721 aa4.85□□□□□ -1.63
VCAN-201ENST00000265077 FXYD3Q14802 87 aa4.85□□□□□ -1.63
VCAN-201ENST00000265077 LINC01590Q5TEZ4 76 aa4.85□□□□□ -1.63
VCAN-201ENST00000265077 LCN12Q6JVE5 192 aa4.85□□□□□ -1.63
VCAN-201ENST00000265077 TMEM190Q8WZ59 177 aa4.85□□□□□ -1.63
VCAN-201ENST00000265077 SLC25A10Q9UBX3 287 aaPredicted RBP4.85□□□□□ -1.63
VCAN-201ENST00000265077 CCL3P10147 92 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 CXorf66Q5JRM2 361 aaPredicted RBP4.84□□□□□ -1.63
VCAN-201ENST00000265077 GCSAMQ8N6F7 178 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 WDR31Q8NA23 367 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 NAV2Q8IVL1 2488 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 LOC389332A0A1B0GUA5 103 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 RPL31P62899 125 aaKnown RBP4.84□□□□□ -1.63
VCAN-201ENST00000265077 ATG2AQ2TAZ0 1938 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 PROB1E7EW31 1015 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 IZUMO1RA6ND01 250 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 IGHV3-13P01766 116 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 IGHV3-7P01780 117 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 COL9A1P20849 921 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 GPR6P46095 362 aaPredicted RBP4.84□□□□□ -1.63
VCAN-201ENST00000265077 SFTPA2Q8IWL1 248 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 SFTPA1Q8IWL2 248 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 DUSP15Q9H1R2 295 aaPredicted RBP4.84□□□□□ -1.63
VCAN-201ENST00000265077 PRDX2P32119 198 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 COA6Q5JTJ3 125 aaKnown RBP4.84□□□□□ -1.63
VCAN-201ENST00000265077 BVES-AS1Q5T3Y7 98 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 FHL5Q5TD97 284 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 TMEM92Q6UXU6 159 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 KCNK17Q96T54 332 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 COL4A1P02462 1669 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 CIRBPQ14011 172 aaKnown RBP4.84□□□□□ -1.63
VCAN-201ENST00000265077 ETDBQ3ZM63 59 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 EAF1Q96JC9 268 aaPredicted RBP4.84□□□□□ -1.63
VCAN-201ENST00000265077 UCN2Q96RP3 112 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 TM2D1Q9BX74 207 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 PLA2G3Q9NZ20 509 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 IFNL4K9M1U5 179 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 C1orf122Q6ZSJ8 110 aa4.84□□□□□ -1.63
VCAN-201ENST00000265077 CHCHD1Q96BP2 118 aaKnown RBP4.84□□□□□ -1.63
VCAN-201ENST00000265077 TMSB15BA0A087X1C1 80 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 TMUB1Q9BVT8 246 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 PILRAQ9UKJ1 303 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 USP24Q9UPU5 2620 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 EVI2AP22794 236 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 PSG4Q00888 419 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 ZNF714Q96N38 554 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 CDX4O14627 284 aaPredicted RBP4.84□□□□□ -1.64
VCAN-201ENST00000265077 SAP30O75446 220 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 TGFAP01135 160 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 CRYBB3P26998 211 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 RPL8P62917 257 aaKnown RBP4.84□□□□□ -1.64
VCAN-201ENST00000265077 CRIM1Q9NZV1 1036 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 FBXL7Q9UJT9 491 aa4.84□□□□□ -1.64
VCAN-201ENST00000265077 KLK10O43240 276 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 MYF5P13349 255 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 Q6ZS52 159 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 NPCDR1Q9BY65 106 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 SS18L1O75177 396 aaPredicted RBP4.83□□□□□ -1.64
VCAN-201ENST00000265077 SIGLEC12Q96PQ1 595 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 IGHV5-10-1A0A0J9YXX1 117 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 NBEAP1P0C6P0 100 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 Q6ZVH6 145 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 A0A1W2PS18 150 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 hDV102S1A0JD36 115 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 PDLIM4P50479 330 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 HSPE1P61604 102 aaKnown RBP4.83□□□□□ -1.64
VCAN-201ENST00000265077 Q0VG73 95 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 C1QTNF4Q9BXJ3 329 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 A0A1W2PPM0 123 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 OR2H2O95918 312 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 SMIM10L1P0DMW3 83 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 GCHFRP30047 84 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 ERVK11-1P61568 191 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 GPR146Q96CH1 333 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 SMIM10Q96HG1 83 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 C8orf88P0DMB2 117 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 DEFB125Q8N687 156 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 ZNF502Q8TBZ5 544 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 TMEM101Q96IK0 257 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 MRPL27Q9P0M9 148 aaKnown RBP4.83□□□□□ -1.64
VCAN-201ENST00000265077 IL18BPO95998 194 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 TMEM78Q5T7P6 136 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 NPFFR1Q9GZQ6 430 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 ATP5LO75964 103 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 LYL1P12980 280 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 COX7A1P24310 79 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 PAPPA-AS1Q5QFB9 102 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 WFDC1Q9HC57 220 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 ZNF441Q8N8Z8 693 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 ARRDC1-AS1Q9H2J1 176 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 PGPEP1Q9NXJ5 209 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 JPT1Q9UK76 154 aa4.83□□□□□ -1.64
VCAN-201ENST00000265077 PGLYRP4Q96LB8 373 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 NRTNQ99748 197 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 ZNF146Q15072 292 aa4.82□□□□□ -1.64
VCAN-201ENST00000265077 ZNF585BQ52M93 769 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms