RNA–Protein interactions for RNA: ENST00000263666.8

PDZRN3-201, Transcript of PDZ domain containing ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZRN3, Length 4,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-201ENST00000263666 COL8A1P27658 744 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 PRNTQ86SH4 94 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 NEU1Q99519 415 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 GOLT1BQ9Y3E0 138 aa13.31□□□□□ -0.28
PDZRN3-201ENST00000263666 GGCTO75223 188 aaKnown RBP13.3□□□□□ -0.28
PDZRN3-201ENST00000263666 NBL1P41271 181 aa13.3□□□□□ -0.28
PDZRN3-201ENST00000263666 C19orf35Q6ZS72 473 aa13.3□□□□□ -0.28
PDZRN3-201ENST00000263666 TDRG1Q3Y452 100 aa13.3□□□□□ -0.28
PDZRN3-201ENST00000263666 NPIPB11E5RHQ5 1161 aa13.3□□□□□ -0.28
PDZRN3-201ENST00000263666 M0QZ24 198 aa13.3□□□□□ -0.28
PDZRN3-201ENST00000263666 PTTG1IPP53801 180 aa13.3□□□□□ -0.28
PDZRN3-201ENST00000263666 TCF24Q7RTU0 167 aa13.3□□□□□ -0.28
PDZRN3-201ENST00000263666 IFI27L2Q9H2X8 130 aa13.3□□□□□ -0.28
PDZRN3-201ENST00000263666 RNF24Q9Y225 148 aa13.3□□□□□ -0.28
PDZRN3-201ENST00000263666 SSX8Q7RTT4 187 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 C11orf53Q8IXP5 236 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 RPEQ96AT9 228 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 NRN1Q9NPD7 142 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 TNFRSF19Q9NS68 423 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 HILPDAQ9Y5L2 63 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 TRBV20OR9-2A0A075B6H5 130 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 PPIAL4EA0A075B759 164 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 CBY3A6NI87 242 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 PPIAL4DF5H284 164 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 SNAI2O43623 268 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 PPIAL4FP0DN26 164 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 LMO1P25800 156 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 HTR1DP28221 377 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 GLRXP35754 106 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 PAFAH1B2P68402 229 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 LURAP1LQ8IV03 231 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 RNF2Q99496 336 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 MCRIP2Q9BUT9 160 aaKnown RBP13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 YPEL1O60688 119 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 P01737 135 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 LINC00305Q7Z4B0 112 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 YPEL2Q96QA6 119 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 SNHG12Q9BXW3 62 aa13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 POLR3KQ9Y2Y1 108 aaPredicted RBP13.29□□□□□ -0.28
PDZRN3-201ENST00000263666 NCBP2LA6PVI3 153 aaKnown RBP13.28□□□□□ -0.28
PDZRN3-201ENST00000263666 DMRTA1Q5VZB9 504 aa13.28□□□□□ -0.28
PDZRN3-201ENST00000263666 INSIG2Q9Y5U4 225 aa13.28□□□□□ -0.28
PDZRN3-201ENST00000263666 KIAA1549Q9HCM3 1950 aa13.28□□□□□ -0.28
PDZRN3-201ENST00000263666 LOC389332A0A1B0GUA5 103 aa13.28□□□□□ -0.28
PDZRN3-201ENST00000263666 MMDQ15546 238 aa13.28□□□□□ -0.28
PDZRN3-201ENST00000263666 C20orf202A1L168 122 aa13.28□□□□□ -0.28
PDZRN3-201ENST00000263666 J3QW42 95 aa13.28□□□□□ -0.28
PDZRN3-201ENST00000263666 LY6DQ14210 128 aa13.28□□□□□ -0.28
PDZRN3-201ENST00000263666 OR8B2Q96RD0 313 aa13.28□□□□□ -0.28
PDZRN3-201ENST00000263666 SIAH2O43255 324 aa13.27□□□□□ -0.28
PDZRN3-201ENST00000263666 SFTPCP11686 197 aa13.27□□□□□ -0.28
PDZRN3-201ENST00000263666 WT1P19544 449 aaPredicted RBP13.27□□□□□ -0.28
PDZRN3-201ENST00000263666 TMEM177Q53S58 311 aa13.27□□□□□ -0.28
PDZRN3-201ENST00000263666 KLHDC1Q8N7A1 406 aa13.27□□□□□ -0.28
PDZRN3-201ENST00000263666 EXPH5Q8NEV8 1989 aa13.27□□□□□ -0.28
PDZRN3-201ENST00000263666 DYSFO75923 2080 aa13.27□□□□□ -0.29
PDZRN3-201ENST00000263666 BRWD1-AS2P59051 145 aa13.27□□□□□ -0.29
PDZRN3-201ENST00000263666 KLRB1Q12918 225 aa13.27□□□□□ -0.29
PDZRN3-201ENST00000263666 ATG2AQ2TAZ0 1938 aa13.27□□□□□ -0.29
PDZRN3-201ENST00000263666 NHLH1Q02575 133 aa13.27□□□□□ -0.29
PDZRN3-201ENST00000263666 ANKRD11Q6UB99 2663 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 GP6Q9HCN6 339 aa13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 CLEC5AQ9NY25 188 aa13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 CHD8Q9HCK8 2581 aa13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 IGKV3-15P01624 115 aa13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 ZNF124Q15973 351 aa13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 MUC15Q8N387 334 aa13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 SFXN3Q9BWM7 321 aa13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 TEX50A0A1B0GTY4 177 aa13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 A0A1W2PN81 502 aa13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 DPRXA6NFQ7 191 aa13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 ZNF430Q9H8G1 570 aaPredicted RBP13.26□□□□□ -0.29
PDZRN3-201ENST00000263666 IGHV1-46P01743 117 aa13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 CT45A10P0DMU9 189 aa13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 CD40P25942 277 aa13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 TMEM144Q7Z5S9 345 aa13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 YPEL4Q96NS1 127 aa13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 WASHC3Q9Y3C0 194 aa13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 UPK2O00526 184 aa13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 ZNF474Q6S9Z5 364 aaPredicted RBP13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 FAM57AQ8TBR7 257 aa13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 Q8TCH9 128 aa13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 TXNDC17Q9BRA2 123 aa13.25□□□□□ -0.29
PDZRN3-201ENST00000263666 HIGD1CA8MV81 97 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 AMY1AP04745 511 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 MAS1LP35410 378 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 RPL27AP46776 148 aaKnown RBP13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 LGALS4P56470 323 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 C15orf65H3BRN8 121 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 DIAPH2-AS1Q14236 149 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 GOLT1AQ6ZVE7 132 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 Q6ZWC4 215 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 PRSS3P2Q8NHM4 247 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 IGFBPL1Q8WX77 278 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 TRAV8-1A0A0A6YYK1 113 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 PROP1O75360 226 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 HLA-DQA1P01909 254 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 TBR1Q16650 682 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 TIMM23BQ5SRD1 257 aa13.24□□□□□ -0.29
PDZRN3-201ENST00000263666 VSTM2AQ8TAG5 236 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms