RNA–Protein interactions for RNA: ENST00000262795.5

SHANK3-201, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS P5 TSL 5 BASIC

Gene SHANK3, Length 7,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-201ENST00000262795 LOC102723996A0A087X1L8 192 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 TRAV8-6A0A0B4J262 113 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 H3BRM9 83 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 SYNJ2BPP57105 145 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 ASPHD2Q6ICH7 369 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 PRSS33Q8NF86 280 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 PHLDA1Q8WV24 401 aaPredicted RBP13.21□□□□□ -0.29
SHANK3-201ENST00000262795 CST9LQ9H4G1 147 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 XIRP1Q702N8 1843 aaKnown RBP13.21□□□□□ -0.29
SHANK3-201ENST00000262795 FCN3O75636 299 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 GNG5P63218 68 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 SCGB3A1Q96QR1 104 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 PPP1R3EQ9H7J1 279 aa13.21□□□□□ -0.29
SHANK3-201ENST00000262795 RBBP6Q7Z6E9 1792 aaKnown RBP13.21□□□□□ -0.3
SHANK3-201ENST00000262795 RBMY1BA6NDE4 496 aaKnown RBP13.21□□□□□ -0.3
SHANK3-201ENST00000262795 RBMY1EA6NEQ0 496 aaKnown RBP13.21□□□□□ -0.3
SHANK3-201ENST00000262795 IQCF6A8MYZ5 107 aa13.21□□□□□ -0.3
SHANK3-201ENST00000262795 RBMY1DP0C7P1 496 aaKnown RBP13.21□□□□□ -0.3
SHANK3-201ENST00000262795 RBMY1A1P0DJD3 496 aaKnown RBP13.21□□□□□ -0.3
SHANK3-201ENST00000262795 RBMY1CP0DJD4 496 aa13.21□□□□□ -0.3
SHANK3-201ENST00000262795 SMIM10L1P0DMW3 83 aa13.21□□□□□ -0.3
SHANK3-201ENST00000262795 EVI2AP22794 236 aa13.21□□□□□ -0.3
SHANK3-201ENST00000262795 MST1P26927 711 aa13.21□□□□□ -0.3
SHANK3-201ENST00000262795 ANXA2RQ3ZCQ2 193 aa13.21□□□□□ -0.3
SHANK3-201ENST00000262795 SMIM10Q96HG1 83 aa13.21□□□□□ -0.3
SHANK3-201ENST00000262795 EDA2RQ9HAV5 297 aa13.2□□□□□ -0.3
SHANK3-201ENST00000262795 MBNL3Q9NUK0 354 aaKnown RBP13.2□□□□□ -0.3
SHANK3-201ENST00000262795 PTPRFP10586 1907 aa13.2□□□□□ -0.3
SHANK3-201ENST00000262795 APOMO95445 188 aa13.2□□□□□ -0.3
SHANK3-201ENST00000262795 TEX38Q6PEX7 206 aa13.2□□□□□ -0.3
SHANK3-201ENST00000262795 DUSP14O95147 198 aaKnown RBP13.2□□□□□ -0.3
SHANK3-201ENST00000262795 CEP290O15078 2479 aa13.2□□□□□ -0.3
SHANK3-201ENST00000262795 ATP5LO75964 103 aa13.2□□□□□ -0.3
SHANK3-201ENST00000262795 LEPROTL1O95214 131 aa13.2□□□□□ -0.3
SHANK3-201ENST00000262795 S100A7L2Q5SY68 101 aa13.2□□□□□ -0.3
SHANK3-201ENST00000262795 RNF166Q96A37 237 aaPredicted RBP13.2□□□□□ -0.3
SHANK3-201ENST00000262795 CGAP01215 116 aa13.2□□□□□ -0.3
SHANK3-201ENST00000262795 SEC11BP0C7V7 166 aa13.2□□□□□ -0.3
SHANK3-201ENST00000262795 POLEQ07864 2286 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 LOC285556D6RIA3 1793 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 A0A0G2JK05 382 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 PAX1P15863 534 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 EGR4Q05215 589 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 IFI27L2Q9H2X8 130 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 IGHV2-26A0A0B4J1V2 119 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 NBEAP1P0C6P0 100 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 TFF3Q07654 80 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 TCF23Q7RTU1 214 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 SAXO1Q8IYX7 474 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 C7orf66A4D0T2 115 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 LY75O60449 1722 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 C15orf32Q32M92 178 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 PEF1Q9UBV8 284 aaKnown RBP13.19□□□□□ -0.3
SHANK3-201ENST00000262795 BRCA1P38398 1863 aaKnown RBP13.19□□□□□ -0.3
SHANK3-201ENST00000262795 COL24A1Q17RW2 1714 aa13.19□□□□□ -0.3
SHANK3-201ENST00000262795 MT-ND6P03923 174 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 LINC00158P58513 81 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 TMEM200BQ69YZ2 307 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 ARID1AO14497 2285 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 H1FOOQ8IZA3 346 aaPredicted RBP13.18□□□□□ -0.3
SHANK3-201ENST00000262795 ZNF48Q96MX3 618 aaPredicted RBP13.18□□□□□ -0.3
SHANK3-201ENST00000262795 Q9H3A6 140 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 SPCS1Q9Y6A9 102 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 HOXA3O43365 443 aaPredicted RBP13.18□□□□□ -0.3
SHANK3-201ENST00000262795 MSMBP08118 114 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 DAD1P61803 113 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 MEF2CQ06413 473 aaPredicted RBP13.18□□□□□ -0.3
SHANK3-201ENST00000262795 TMEM252Q8N6L7 170 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 DOCK7Q96N67 2140 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 SRSF3P84103 164 aaKnown RBP13.18□□□□□ -0.3
SHANK3-201ENST00000262795 Q96M66 194 aa13.18□□□□□ -0.3
SHANK3-201ENST00000262795 NTN3O00634 580 aaPredicted RBP13.17□□□□□ -0.3
SHANK3-201ENST00000262795 PRELID3AQ96N28 172 aa13.17□□□□□ -0.3
SHANK3-201ENST00000262795 SRIP30626 198 aa13.17□□□□□ -0.3
SHANK3-201ENST00000262795 GZMMP51124 257 aa13.17□□□□□ -0.3
SHANK3-201ENST00000262795 FOXG1P55316 489 aaPredicted RBP13.17□□□□□ -0.3
SHANK3-201ENST00000262795 BMPERQ8N8U9 685 aa13.17□□□□□ -0.3
SHANK3-201ENST00000262795 INS-IGF2F8WCM5 200 aa13.17□□□□□ -0.3
SHANK3-201ENST00000262795 INSP01308 110 aa13.17□□□□□ -0.3
SHANK3-201ENST00000262795 OSR1Q8TAX0 266 aaPredicted RBP13.17□□□□□ -0.3
SHANK3-201ENST00000262795 SLC25A39Q9BZJ4 359 aaPredicted RBP13.17□□□□□ -0.3
SHANK3-201ENST00000262795 TIMP3P35625 211 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 KLF17Q5JT82 389 aaPredicted RBP13.16□□□□□ -0.3
SHANK3-201ENST00000262795 FOXA3P55318 350 aaPredicted RBP13.16□□□□□ -0.3
SHANK3-201ENST00000262795 OR9G9P0C7N8 305 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 CD28P10747 220 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 OR52E5Q8NH55 327 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 SBF1O95248 1867 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 IGLV2-23P01705 113 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 OR10W1Q8NGF6 305 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 HLA-DQB1P01920 261 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 IGFL4Q6B9Z1 124 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 PRDM13Q9H4Q3 707 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 FOLR2P14207 255 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 SAA4P35542 130 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 TXNDC17Q9BRA2 123 aa13.16□□□□□ -0.3
SHANK3-201ENST00000262795 ABCA4P78363 2273 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 PMCHL1Q16048 86 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 TMEM155Q4W5P6 130 aa13.15□□□□□ -0.3
SHANK3-201ENST00000262795 CENPWQ5EE01 88 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms