RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 DIRC3C9JPN6 131 aa13.84□□□□□ -0.19
SLC52A1-201ENST00000254853 HLA-DQA1P01909 254 aa13.84□□□□□ -0.19
SLC52A1-201ENST00000254853 DYSFO75923 2080 aa13.83□□□□□ -0.19
SLC52A1-201ENST00000254853 IZUMO1RA6ND01 250 aa13.83□□□□□ -0.19
SLC52A1-201ENST00000254853 IGHV3-48P01763 117 aa13.83□□□□□ -0.19
SLC52A1-201ENST00000254853 FOSL1P15407 271 aa13.83□□□□□ -0.19
SLC52A1-201ENST00000254853 ZNF25P17030 456 aaPredicted RBP13.83□□□□□ -0.19
SLC52A1-201ENST00000254853 C10orf55Q5SWW7 151 aa13.83□□□□□ -0.19
SLC52A1-201ENST00000254853 FNDC4Q9H6D8 234 aaPredicted RBP13.83□□□□□ -0.19
SLC52A1-201ENST00000254853 ZNF355PQ9NSJ1 428 aa13.83□□□□□ -0.19
SLC52A1-201ENST00000254853 CFAP47Q6ZTR5 3102 aa13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 NKX6-3A6NJ46 265 aa13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 A6NNC1 897 aa13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 COX7A2P2O60397 106 aa13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 CASP6P55212 293 aa13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 MRPL52Q86TS9 123 aaKnown RBP13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 OR5AN1Q8NGI8 311 aa13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 FLYWCH2Q96CP2 140 aaKnown RBP13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 RNF2Q99496 336 aa13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 GAL3ST2Q9H3Q3 398 aa13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 AMMECR1Q9Y4X0 333 aaPredicted RBP13.83□□□□□ -0.2
SLC52A1-201ENST00000254853 PLCE1Q9P212 2302 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 CGB1A6NKQ9 187 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 FCN3O75636 299 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 APCSP02743 223 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 RPLP1P05386 114 aaKnown RBP13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 WT1-ASQ06250 92 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 DIAPH2-AS1Q14236 149 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 TMEM177Q53S58 311 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 PATE2Q6UY27 113 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 ZCCHC24Q8N2G6 241 aaKnown RBP13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 NPIPB3Q92617 1050 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 PAXXQ9BUH6 204 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 TRAV34A0A0B4J273 112 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 USF1P22415 310 aaPredicted RBP13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 C10orf113Q5VZT2 155 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 ZNF329Q86UD4 541 aa13.82□□□□□ -0.2
SLC52A1-201ENST00000254853 ZNF324O75467 553 aaPredicted RBP13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 SLAQ13239 276 aa13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 MRPL36Q9P0J6 103 aaKnown RBP13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 INS-IGF2F8WCM5 200 aa13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 TMEM200BQ69YZ2 307 aa13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 NIT1Q86X76 327 aa13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 FAM19A2Q8N3H0 131 aa13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 OR4B1Q8NGF8 309 aa13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 TMEM167AQ8TBQ9 72 aa13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 ZNF430Q9H8G1 570 aaPredicted RBP13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 ZNF331Q9NQX6 463 aaPredicted RBP13.81□□□□□ -0.2
SLC52A1-201ENST00000254853 IGKV1D-37A0A075B6S9 117 aa13.8□□□□□ -0.2
SLC52A1-201ENST00000254853 A0A1W2PN81 502 aa13.8□□□□□ -0.2
SLC52A1-201ENST00000254853 PEX7O00628 323 aa13.8□□□□□ -0.2
SLC52A1-201ENST00000254853 MEF2CQ06413 473 aaPredicted RBP13.8□□□□□ -0.2
SLC52A1-201ENST00000254853 TSKUQ8WUA8 353 aa13.8□□□□□ -0.2
SLC52A1-201ENST00000254853 MBD6Q96DN6 1003 aa13.8□□□□□ -0.2
SLC52A1-201ENST00000254853 TCRBV4S1A1TA0A5B7 111 aa13.8□□□□□ -0.2
SLC52A1-201ENST00000254853 BATFQ16520 125 aa13.8□□□□□ -0.2
SLC52A1-201ENST00000254853 OR1L4Q8NGR5 311 aa13.8□□□□□ -0.2
SLC52A1-201ENST00000254853 TMEM68Q96MH6 324 aa13.8□□□□□ -0.2
SLC52A1-201ENST00000254853 PLAUP00749 431 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 CTRLP40313 264 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 GDF5OSQ5U4N7 250 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 NUDT10Q8NFP7 164 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 OR4C13Q8NGP0 309 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 OR10X1Q8NGY0 326 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 FXYD5Q96DB9 178 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 NUDT11Q96G61 164 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 FSTL3O95633 263 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 IGLV2-23P01705 113 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 C3orf79P0CE67 100 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 TNFRSF1AP19438 455 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 CEACAM8P31997 349 aaPredicted RBP13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 SPATA45Q537H7 98 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 FAM231DQ6ZW35 169 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 NUP37Q8NFH4 326 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 TMEM208Q9BTX3 173 aa13.79□□□□□ -0.2
SLC52A1-201ENST00000254853 ARFGEF3Q5TH69 2177 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 MFAP2P55001 183 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 BPIFB3P59826 476 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 GNG5P63218 68 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 PRR27Q6MZM9 219 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 IGFL3Q6UXB1 125 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 NUP35Q8NFH5 326 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 OR4A5Q8NH83 315 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 C18orf32Q8TCD1 76 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 WIPF2Q8TF74 440 aaPredicted RBP13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 H1FXQ92522 213 aaKnown RBP13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 GRAMD2BQ96HH9 432 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 C17orf100A8MU93 164 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 REG1AP05451 166 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 NTF3P20783 257 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 PRRX1P54821 245 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 TBR1Q16650 682 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 Q6ZS92 163 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 PDPNQ86YL7 162 aa13.78□□□□□ -0.2
SLC52A1-201ENST00000254853 BOD1L1Q8NFC6 3051 aa13.77□□□□□ -0.2
SLC52A1-201ENST00000254853 K7EM74 188 aa13.77□□□□□ -0.21
SLC52A1-201ENST00000254853 SUB1P53999 127 aaKnown RBP eCLIP13.77□□□□□ -0.21
SLC52A1-201ENST00000254853 ADIPOQQ15848 244 aa13.77□□□□□ -0.21
SLC52A1-201ENST00000254853 RUSC1-AS1Q66K80 236 aa13.77□□□□□ -0.21
SLC52A1-201ENST00000254853 ZNF841Q6ZN19 808 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms