RNA–Protein interactions for RNA: ENST00000235958.4

HMGCL-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 5

Gene HMGCL, Length 1,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-201ENST00000235958 C21orf62Q9NYP8 219 aa7.85□□□□□ -1.15
HMGCL-201ENST00000235958 PEF1Q9UBV8 284 aaKnown RBP7.85□□□□□ -1.15
HMGCL-201ENST00000235958 TRAV14DV4A0A0A6YYC5 116 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 CCNKO75909 580 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 CST7O76096 145 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 CD69Q07108 199 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 ARL16Q0P5N6 197 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 OR8G2PQ6IF36 304 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 ETFRF1Q6IPR1 90 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 ACSM6Q6P461 480 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 PRSS54Q6PEW0 395 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 TMEM252Q8N6L7 170 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 OR11H1Q8NG94 326 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 OR2T35Q8NGX2 323 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 DPF1Q92782 380 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 RAX2Q96IS3 184 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 CCDC140Q96MF4 163 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 TXN2Q99757 166 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 RANGRFQ9HD47 186 aaPredicted RBP7.84□□□□□ -1.15
HMGCL-201ENST00000235958 LYRM2Q9NU23 88 aaPredicted RBP7.84□□□□□ -1.15
HMGCL-201ENST00000235958 MRPL36Q9P0J6 103 aaKnown RBP7.84□□□□□ -1.15
HMGCL-201ENST00000235958 MBD2Q9UBB5 411 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 NOTCH3Q9UM47 2321 aa7.84□□□□□ -1.15
HMGCL-201ENST00000235958 DNHD1Q96M86 4753 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 IGHV4OR15-8A0A075B7B6 117 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 A0A087WW49 117 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 RPS10-NUDT3A0A1W2PQS6 291 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 IGSF23A1L1A6 192 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 OR2T8A6NH00 312 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 PRSS46E5RG02 174 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 PPP5D1E7EU14 171 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 F8W735 103 aaPredicted RBP7.83□□□□□ -1.16
HMGCL-201ENST00000235958 OR2C1O95371 312 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 CTSGP08311 255 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 PET100P0DJ07 73 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 SLC25A4P12235 298 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 LYL1P12980 280 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 P2RY1P47900 373 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 NHLH2Q02577 135 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 FGL1Q08830 312 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 ZNF616Q08AN1 781 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 GAMTQ14353 236 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 Q56UQ5 140 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 FAM209BQ5JX69 171 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 HAPLN4Q86UW8 402 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 UBAC2Q8NBM4 344 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 OR10P1Q8NGE3 313 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 OR4X1Q8NH49 305 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 NPIPB3Q92617 1050 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 SLC25A31Q9H0C2 315 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 ZC4H2Q9NQZ6 224 aa7.83□□□□□ -1.16
HMGCL-201ENST00000235958 SMLR1H3BR10 107 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 M0QZ24 198 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 BMPR1BO00238 502 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 GGCTO75223 188 aaKnown RBP7.82□□□□□ -1.16
HMGCL-201ENST00000235958 FCGR2BP31994 310 aaPredicted RBP7.82□□□□□ -1.16
HMGCL-201ENST00000235958 GPR183P32249 361 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 MYCNOSP40205 109 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 NPBWR1P48145 328 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 RND2P52198 227 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 SLC16A13Q7RTY0 426 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 ZNF546Q86UE3 836 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 TMEM217Q8N7C4 229 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 TMEM116Q8NCL8 245 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 OR4F17Q8NGA8 305 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 DCUN1D4Q92564 292 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 BSCL2Q96G97 398 aaPredicted RBP7.82□□□□□ -1.16
HMGCL-201ENST00000235958 ACY3Q96HD9 319 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 ST6GAL2Q96JF0 529 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 OR4F4Q96R69 305 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 ATP6V0BQ99437 205 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 CHRDL1Q9BU40 450 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 GAR1Q9NY12 217 aaKnown RBP7.82□□□□□ -1.16
HMGCL-201ENST00000235958 VWFP04275 2813 aa7.82□□□□□ -1.16
HMGCL-201ENST00000235958 IGHV3-35A0A0C4DH35 117 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 LINC01619G3V211 115 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 G3V3Q6 166 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 NUPL2O15504 423 aaKnown RBP7.81□□□□□ -1.16
HMGCL-201ENST00000235958 TGOLN2O43493 480 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 GNG7O60262 68 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 CLN5O75503 358 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 TSPAN15O95858 294 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 RPL12P30050 165 aaKnown RBP7.81□□□□□ -1.16
HMGCL-201ENST00000235958 HOXD3P31249 432 aaPredicted RBP7.81□□□□□ -1.16
HMGCL-201ENST00000235958 S100A11P31949 105 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 ADMP35318 185 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 ARL3P36405 182 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 SULT1A1P50225 295 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 SPSB3Q6PJ21 355 aa7.81□□□□□ -1.16
HMGCL-201ENST00000235958 TRAV30A0A087WSZ9 112 aa7.8□□□□□ -1.16
HMGCL-201ENST00000235958 IGKV1-17P01599 117 aa7.8□□□□□ -1.16
HMGCL-201ENST00000235958 PF4P02776 101 aa7.8□□□□□ -1.16
HMGCL-201ENST00000235958 ZP3P21754 424 aa7.8□□□□□ -1.16
HMGCL-201ENST00000235958 SLURP1P55000 103 aa7.8□□□□□ -1.16
HMGCL-201ENST00000235958 DLK1P80370 383 aa7.8□□□□□ -1.16
HMGCL-201ENST00000235958 EWSR1Q01844 656 aaKnown RBP eCLIP7.8□□□□□ -1.16
HMGCL-201ENST00000235958 SLC38A11Q08AI6 406 aa7.8□□□□□ -1.16
HMGCL-201ENST00000235958 FHL3Q13643 280 aa7.8□□□□□ -1.16
HMGCL-201ENST00000235958 KLF5Q13887 457 aaPredicted RBP7.8□□□□□ -1.16
HMGCL-201ENST00000235958 RPEL1Q2QD12 228 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms