RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 MRPL14Q6P1L8 145 aaKnown RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 GRIFINA4D1Z8 144 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 RAMP1O60894 148 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 SERF1AO75920 110 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 C1QCP02747 245 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 MYF5P13349 255 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 PDLIM4P50479 330 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 FXYD3Q14802 87 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 UBTD1Q9HAC8 227 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 SPCS1Q9Y6A9 102 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 IGHV2OR16-5A0A0B4J2B6 119 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 RBMY1BA6NDE4 496 aaKnown RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 RBMY1EA6NEQ0 496 aaKnown RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 E9PQ18 207 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 CGAP01215 116 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 RBMY1DP0C7P1 496 aaKnown RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 RBMY1A1P0DJD3 496 aaKnown RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 RBMY1CP0DJD4 496 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 FBLN7Q53RD9 439 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 DEFB124Q8NES8 71 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 FLVCR1-AS1Q8TAF5 88 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 DPM3Q9P2X0 92 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 EPDR1Q9UM22 224 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 COL5A1P20908 1838 aaPredicted RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 MSGN1A6NI15 193 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 SSTR5P35346 364 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 TFF3Q07654 80 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 SPATA31B1PQ5VZV4 182 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 UNQ5815/PRO19632Q6UWF5 114 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 SCGB3A1Q96QR1 104 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 AKAP6Q13023 2319 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 MEX3AA1L020 520 aaKnown RBP3.7□□□□□ -1.82
CHD9-201ENST00000219084 IL18BPO95998 194 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 NAPSAO96009 420 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 LHX2P50458 406 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 MORN2Q502X0 79 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 TMEM42Q69YG0 159 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 ASCL4Q6XD76 172 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 PPP1R32Q7Z5V6 425 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 NUDT10Q8NFP7 164 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 ANAPC10Q9UM13 185 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 EXPH5Q8NEV8 1989 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 FABP5P3A8MUU1 101 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 FAM157AC9JC47 383 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 FTH1P19P0C7X4 201 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 CRYGSP22914 178 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 SPEM2Q0P670 501 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 GAGE1Q13065 139 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 PRSS8Q16651 343 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 NMSQ5H8A3 153 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 WDR82Q6UXN9 313 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 SIGMAR1Q99720 223 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 C21orf62Q9NYP8 219 aa3.7□□□□□ -1.82
CHD9-201ENST00000219084 TMEM238C9JI98 176 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 ADMP35318 185 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 EFNB3Q15768 340 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 TMEM14EPQ6UXP3 125 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 PROB1E7EW31 1015 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 CCL21O00585 134 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 DUTP33316 252 aaKnown RBP3.69□□□□□ -1.82
CHD9-201ENST00000219084 QRFPP83859 136 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 SRSF2Q01130 221 aaKnown RBP3.69□□□□□ -1.82
CHD9-201ENST00000219084 LAGE3Q14657 143 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 S100A7L2Q5SY68 101 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 SAA2-SAA4A0A096LPE2 208 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 NBR2O15453 112 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 CEACAM4O75871 244 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 SAA2P0DJI9 122 aaPredicted RBP3.69□□□□□ -1.82
CHD9-201ENST00000219084 GLRX5Q86SX6 157 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 RPRMLQ8N4K4 120 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 NPIPB3Q92617 1050 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 GFI1Q99684 422 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 TBX6O95947 436 aaPredicted RBP3.69□□□□□ -1.82
CHD9-201ENST00000219084 IGFBP2P18065 325 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 ZNF56Q15929 161 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 ZNF124Q15973 351 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 HCP5Q6MZN7 132 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 RNF182Q8N6D2 247 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 OR2K2Q8NGT1 345 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 TIMP4Q99727 224 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 MGST2Q99735 147 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 CYSLTR1Q9Y271 337 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 OVOL1O14753 267 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 IGHV3-13P01766 116 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 IGHV3-7P01780 117 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 CCL8P80075 99 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 WBP1Q96G27 269 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 SSBP3Q9BWW4 388 aaPredicted RBP3.69□□□□□ -1.82
CHD9-201ENST00000219084 CYTL1Q9NRR1 136 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 WDR83OSQ9Y284 106 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 TNFRSF18Q9Y5U5 241 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 IGKCP01834 107 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 IGHG4P01861 327 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 REG1BP48304 166 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 Q0VG73 95 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 SPSB3Q6PJ21 355 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 C1QL2Q7Z5L3 287 aa3.69□□□□□ -1.82
CHD9-201ENST00000219084 PAQR4Q8N4S7 273 aaPredicted RBP3.69□□□□□ -1.82
CHD9-201ENST00000219084 NRTNQ99748 197 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms