RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 OR10C1Q96KK4 312 aa13.17□□□□□ -0.3
MRPL28-201ENST00000199706 DNAH9Q9NYC9 4486 aa13.17□□□□□ -0.3
MRPL28-201ENST00000199706 IGHV3-21A0A0B4J1V1 117 aa13.16□□□□□ -0.3
MRPL28-201ENST00000199706 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
MRPL28-201ENST00000199706 GNG7O60262 68 aa13.16□□□□□ -0.3
MRPL28-201ENST00000199706 OR4E1P0C645 316 aa13.16□□□□□ -0.3
MRPL28-201ENST00000199706 SLC25A4P12235 298 aa13.16□□□□□ -0.3
MRPL28-201ENST00000199706 CD300EQ496F6 205 aaPredicted RBP13.16□□□□□ -0.3
MRPL28-201ENST00000199706 UBAC2Q8NBM4 344 aa13.16□□□□□ -0.3
MRPL28-201ENST00000199706 COQ8AQ8NI60 647 aa13.16□□□□□ -0.3
MRPL28-201ENST00000199706 DTD1Q8TEA8 209 aa13.16□□□□□ -0.3
MRPL28-201ENST00000199706 ZNF414Q96IQ9 312 aa13.16□□□□□ -0.3
MRPL28-201ENST00000199706 LINC00854A0A1B0GVQ3 168 aa13.15□□□□□ -0.3
MRPL28-201ENST00000199706 NHLRC4P0CG21 123 aaPredicted RBP13.15□□□□□ -0.3
MRPL28-201ENST00000199706 NPY1RP25929 384 aa13.15□□□□□ -0.3
MRPL28-201ENST00000199706 OPRK1P41145 380 aa13.15□□□□□ -0.3
MRPL28-201ENST00000199706 ETFRF1Q6IPR1 90 aa13.15□□□□□ -0.3
MRPL28-201ENST00000199706 GTSCR1Q86UQ5 136 aa13.15□□□□□ -0.3
MRPL28-201ENST00000199706 Q8N1Y9 231 aa13.15□□□□□ -0.3
MRPL28-201ENST00000199706 UXS1Q8NBZ7 420 aa13.15□□□□□ -0.3
MRPL28-201ENST00000199706 OR1S1Q8NH92 325 aa13.15□□□□□ -0.3
MRPL28-201ENST00000199706 C20orf85Q9H1P6 137 aa13.15□□□□□ -0.3
MRPL28-201ENST00000199706 FNDC4Q9H6D8 234 aaPredicted RBP13.15□□□□□ -0.3
MRPL28-201ENST00000199706 TRAV30A0A087WSZ9 112 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 CLN5O75503 358 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 MED6O75586 246 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 CD69Q07108 199 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 ASAH1Q13510 395 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 ZNF846Q147U1 533 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 TM4SF20Q53R12 229 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 TMEM116Q8NCL8 245 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 MITD1Q8WV92 249 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 TMEM170AQ8WVE7 144 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 CIB3Q96Q77 187 aaPredicted RBP13.14□□□□□ -0.31
MRPL28-201ENST00000199706 RBKSQ9H477 322 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 MLXQ9UH92 298 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 FLVCR2Q9UPI3 526 aa13.14□□□□□ -0.31
MRPL28-201ENST00000199706 STAB2Q8WWQ8 2551 aa13.13□□□□□ -0.31
MRPL28-201ENST00000199706 TCRBP04435 133 aa13.13□□□□□ -0.31
MRPL28-201ENST00000199706 C4orf46Q504U0 113 aa13.13□□□□□ -0.31
MRPL28-201ENST00000199706 ZNF600Q6ZNG1 722 aa13.13□□□□□ -0.31
MRPL28-201ENST00000199706 CACNG8Q8WXS5 425 aa13.13□□□□□ -0.31
MRPL28-201ENST00000199706 IGHV3-35A0A0C4DH35 117 aa13.12□□□□□ -0.31
MRPL28-201ENST00000199706 IZUMO1RA6ND01 250 aa13.12□□□□□ -0.31
MRPL28-201ENST00000199706 ZNF785A8K8V0 405 aa13.12□□□□□ -0.31
MRPL28-201ENST00000199706 TMEM50AO95807 157 aa13.12□□□□□ -0.31
MRPL28-201ENST00000199706 ANXA7P20073 488 aaKnown RBP13.12□□□□□ -0.31
MRPL28-201ENST00000199706 EDN2P20800 178 aa13.12□□□□□ -0.31
MRPL28-201ENST00000199706 GGNBP1Q5YKI7 109 aa13.12□□□□□ -0.31
MRPL28-201ENST00000199706 MZT2BQ6NZ67 158 aa13.12□□□□□ -0.31
MRPL28-201ENST00000199706 TMEM61Q8N0U2 210 aa13.12□□□□□ -0.31
MRPL28-201ENST00000199706 GINS3Q9BRX5 216 aa13.12□□□□□ -0.31
MRPL28-201ENST00000199706 UPK1BO75841 260 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 IFNA10P01566 189 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 IFNA21P01568 189 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 IGHV3-48P01763 117 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 CD5P06127 495 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 HOXB5P09067 269 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 BMI1P35226 326 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 PRSS54Q6PEW0 395 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 BTNL8Q6UX41 500 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 SPAG8Q99932 426 aaPredicted RBP13.11□□□□□ -0.31
MRPL28-201ENST00000199706 NUDT15Q9NV35 164 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 C19orf73Q9NVV2 129 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 TBC1D24Q9ULP9 559 aa13.11□□□□□ -0.31
MRPL28-201ENST00000199706 TSPAN4O14817 238 aa13.1□□□□□ -0.31
MRPL28-201ENST00000199706 SYNGR2O43760 224 aa13.1□□□□□ -0.31
MRPL28-201ENST00000199706 NXPH3O95157 252 aa13.1□□□□□ -0.31
MRPL28-201ENST00000199706 IGKV1-17P01599 117 aa13.1□□□□□ -0.31
MRPL28-201ENST00000199706 GPX4P36969 197 aaPredicted RBP13.1□□□□□ -0.31
MRPL28-201ENST00000199706 OR1S2Q8NGQ3 325 aa13.1□□□□□ -0.31
MRPL28-201ENST00000199706 C20orf24Q9BUV8 137 aa13.1□□□□□ -0.31
MRPL28-201ENST00000199706 ZFAND3Q9H8U3 227 aa13.1□□□□□ -0.31
MRPL28-201ENST00000199706 MRPL36Q9P0J6 103 aaKnown RBP13.1□□□□□ -0.31
MRPL28-201ENST00000199706 SMPXQ9UHP9 88 aa13.1□□□□□ -0.31
MRPL28-201ENST00000199706 IGHV7-4-1A0A0J9YVY3 117 aa13.09□□□□□ -0.31
MRPL28-201ENST00000199706 FAM240BA0A1B0GVZ2 78 aa13.09□□□□□ -0.31
MRPL28-201ENST00000199706 FRMD6-AS1P0C7T7 363 aa13.09□□□□□ -0.31
MRPL28-201ENST00000199706 IGLC1P0CG04 106 aa13.09□□□□□ -0.31
MRPL28-201ENST00000199706 IGHV4-30-4P0DP06 118 aa13.09□□□□□ -0.31
MRPL28-201ENST00000199706 YPEL3P61236 119 aaPredicted RBP13.09□□□□□ -0.31
MRPL28-201ENST00000199706 RPP30P78346 268 aaKnown RBP13.09□□□□□ -0.31
MRPL28-201ENST00000199706 ID3Q02535 119 aa13.09□□□□□ -0.31
MRPL28-201ENST00000199706 LAMTOR1Q6IAA8 161 aa13.09□□□□□ -0.31
MRPL28-201ENST00000199706 TOMM20LQ6UXN7 152 aa13.09□□□□□ -0.31
MRPL28-201ENST00000199706 SLC16A13Q7RTY0 426 aa13.09□□□□□ -0.31
MRPL28-201ENST00000199706 TRAV14DV4A0A0A6YYC5 116 aa13.08□□□□□ -0.32
MRPL28-201ENST00000199706 ADAP1O75689 374 aa13.08□□□□□ -0.32
MRPL28-201ENST00000199706 SCAF4O95104 1147 aaKnown RBP13.08□□□□□ -0.32
MRPL28-201ENST00000199706 RND2P52198 227 aa13.08□□□□□ -0.32
MRPL28-201ENST00000199706 RAB11AP62491 216 aa13.08□□□□□ -0.32
MRPL28-201ENST00000199706 RBPMS2Q6ZRY4 209 aaKnown RBP13.08□□□□□ -0.32
MRPL28-201ENST00000199706 WDR89Q96FK6 387 aaPredicted RBP13.08□□□□□ -0.32
MRPL28-201ENST00000199706 FAM110AQ9BQ89 295 aa13.08□□□□□ -0.32
MRPL28-201ENST00000199706 NEURL2Q9BR09 285 aa13.08□□□□□ -0.32
MRPL28-201ENST00000199706 PUS1Q9Y606 427 aaKnown RBP eCLIP13.08□□□□□ -0.32
MRPL28-201ENST00000199706 CHEK1O14757 476 aa13.07□□□□□ -0.32
MRPL28-201ENST00000199706 YIF1AO95070 293 aa13.07□□□□□ -0.32
MRPL28-201ENST00000199706 CD81P60033 236 aa13.07□□□□□ -0.32
MRPL28-201ENST00000199706 GUCA2BQ16661 112 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms