RNA–Protein interactions for RNA: ENST00000064724.7

CLDN11-201, Transcript of claudin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN11, Length 2,169 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-201ENST00000064724 ROS1P08922 2347 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 PRR30Q53SZ7 412 aaPredicted RBP13.95□□□□□ -0.18
CLDN11-201ENST00000064724 PATE2Q6UY27 113 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 TNFRSF14Q92956 283 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 RITA1Q96K30 269 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 MRPL18Q9H0U6 180 aaKnown RBP13.95□□□□□ -0.18
CLDN11-201ENST00000064724 A0A1B0GUS0 222 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 A0A1W2PPI3 338 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 COX7A2P2O60397 106 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 FSTL3O95633 263 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 ESDP10768 282 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 UBE2L3P68036 154 aaKnown RBP13.95□□□□□ -0.18
CLDN11-201ENST00000064724 TEX45Q8NA69 505 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 OR5AU1Q8NGC0 362 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 OR1L6Q8NGR2 347 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 NOL4LQ96MY1 436 aaPredicted RBP13.95□□□□□ -0.18
CLDN11-201ENST00000064724 GNB1LQ9BYB4 327 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 TPSG1Q9NRR2 321 aa13.95□□□□□ -0.18
CLDN11-201ENST00000064724 A8MWP6 167 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 B9A039 149 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 CRYGCP07315 174 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 TAS2R60P59551 318 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 CX3CL1P78423 397 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 IQCJQ1A5X6 159 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 C10orf113Q5VZT2 155 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 VKORC1Q9BQB6 163 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 ZNF355PQ9NSJ1 428 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 MRPL36Q9P0J6 103 aaKnown RBP13.94□□□□□ -0.18
CLDN11-201ENST00000064724 CDC42EP3Q9UKI2 254 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 TP53TG3Q9ULZ0 132 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 ACACAQ13085 2346 aa13.94□□□□□ -0.18
CLDN11-201ENST00000064724 ZNF705GA8MUZ8 300 aaPredicted RBP13.93□□□□□ -0.18
CLDN11-201ENST00000064724 RBPJQ06330 500 aa13.93□□□□□ -0.18
CLDN11-201ENST00000064724 OR8I2Q8N0Y5 310 aa13.93□□□□□ -0.18
CLDN11-201ENST00000064724 RNASE7Q9H1E1 156 aaKnown RBP13.93□□□□□ -0.18
CLDN11-201ENST00000064724 SMG1Q96Q15 3661 aaKnown RBP13.93□□□□□ -0.18
CLDN11-201ENST00000064724 IGLC7A0M8Q6 106 aa13.93□□□□□ -0.18
CLDN11-201ENST00000064724 IER3P46695 156 aa13.93□□□□□ -0.18
CLDN11-201ENST00000064724 BPIFB3P59826 476 aa13.93□□□□□ -0.18
CLDN11-201ENST00000064724 RAB4BP61018 213 aa13.93□□□□□ -0.18
CLDN11-201ENST00000064724 RPL19P84098 196 aaKnown RBP13.93□□□□□ -0.18
CLDN11-201ENST00000064724 UNQ6494/PRO21346Q6UXR6 183 aa13.93□□□□□ -0.18
CLDN11-201ENST00000064724 GVINP1Q7Z2Y8 2422 aa13.93□□□□□ -0.18
CLDN11-201ENST00000064724 ATMQ13315 3056 aa13.93□□□□□ -0.18
CLDN11-201ENST00000064724 K7ENP7 123 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 FCN1O00602 326 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 IGLV1-47P01700 117 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 CRYGBP07316 175 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 FRMD6-AS1P0C7T7 363 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 CRISP2P16562 243 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 LINC00310P59036 64 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 ST6GALNAC3Q8NDV1 305 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 PAXXQ9BUH6 204 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 RALYQ9UKM9 306 aaKnown RBP13.92□□□□□ -0.18
CLDN11-201ENST00000064724 GRIFINA4D1Z8 144 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 CD3EP07766 207 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 Q0VG73 95 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 COX19Q49B96 90 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 ETFRF1Q6IPR1 90 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 CMTM2Q8TAZ6 248 aa13.92□□□□□ -0.18
CLDN11-201ENST00000064724 SMIM27A0A1W2PRY6 76 aa13.91□□□□□ -0.18
CLDN11-201ENST00000064724 SNURFLB1AK76 121 aa13.91□□□□□ -0.18
CLDN11-201ENST00000064724 MT-ND6P03923 174 aa13.91□□□□□ -0.18
CLDN11-201ENST00000064724 PYYP10082 97 aa13.91□□□□□ -0.18
CLDN11-201ENST00000064724 PAFAH1B2P68402 229 aa13.91□□□□□ -0.18
CLDN11-201ENST00000064724 AMMECR1Q9Y4X0 333 aaPredicted RBP13.91□□□□□ -0.18
CLDN11-201ENST00000064724 IGHV2-26A0A0B4J1V2 119 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.9□□□□□ -0.18
CLDN11-201ENST00000064724 ENSAO43768 121 aaKnown RBP13.9□□□□□ -0.18
CLDN11-201ENST00000064724 IGHV3-48P01763 117 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 CASP6P55212 293 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 IBA57Q5T440 356 aaKnown RBP13.9□□□□□ -0.18
CLDN11-201ENST00000064724 WDR73Q6P4I2 378 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 FXYD5Q96DB9 178 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 MS4A10Q96PG2 267 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 ADGRG4Q8IZF6 3080 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 IGHV3-72A0A0B4J1Y9 119 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 C22orf46C9J442 243 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 PRRX1P54821 245 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 PAX2Q02962 417 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 ZNF841Q6ZN19 808 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 ZNF329Q86UD4 541 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 APC2O95996 2303 aa13.9□□□□□ -0.18
CLDN11-201ENST00000064724 PCNX1Q96RV3 2341 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 REG1AP05451 166 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 MYCNOSP40205 109 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 MFAP2P55001 183 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 FXYD3Q14802 87 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 TMEM116Q8NCL8 245 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 STXBP6Q8NFX7 210 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 TRGV9Q99603 122 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 PKDREJQ9NTG1 2253 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 RPL27AP46776 148 aaKnown RBP13.89□□□□□ -0.19
CLDN11-201ENST00000064724 RANP62826 216 aaKnown RBP13.89□□□□□ -0.19
CLDN11-201ENST00000064724 TMEM136Q6ZRR5 245 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 LINC00305Q7Z4B0 112 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 BEND2Q8NDZ0 799 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 TNFRSF19Q9NS68 423 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 SIGLEC9Q9Y336 463 aa13.89□□□□□ -0.19
CLDN11-201ENST00000064724 SERF1AO75920 110 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms