RNA–Protein interactions for RNA: ENSMUST00000173369.1

Trim39-205, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

TSL 1 (best) BASIC

Gene Trim39, Length 2,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-205ENSMUST00000173369 Aqp11Q8BHH1 271 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 C1qtnf4Q8R066 326 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Aqp3Q8R2N1 292 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Stab1Q8R4Y4 2571 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gm42543A0A0G2JET4 117 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Znf385cA2A5E6 429 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr1214A2ATG3 311 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gm21560D3Z7A4 205 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gm3072F6SKY8 209 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 4933408B17RikG3X9B4 273 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 NfyaP23708 346 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 C1ql4Q4ZJM9 238 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Rnf150Q5DTZ6 437 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Arg1Q61176 323 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 SprnQ8BWU1 147 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr715Q8VG49 315 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Cacng5Q8VHW4 275 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Adarb1Q91ZS8 711 aaKnown RBP6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Oxld1Q9CR10 201 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Q9CWB7 115 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 CenpvQ9CXS4 252 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Lysmd2Q9D7V2 215 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 TsnaxQ9QZE7 290 aaKnown RBP6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gm26992S4R1A3 76 aa6.96□□□□□ -1.3
Trim39-205ENSMUST00000173369 Ighv5-9A0A075B5Q2 117 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Sirpb1bA0A0A6YXN8 397 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Vmn1r129E9QA94 307 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gm8720K9J7F4 307 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 TectbO08524 329 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Sigmar1O55242 223 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Acrv1P50289 261 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 SelenotP62342 195 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Adra2aQ01338 450 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr16Q62007 309 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 CmblQ8R1G2 245 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gorasp2Q99JX3 451 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 2410137M14RikQ9CWF0 162 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Abhd5Q9DBL9 351 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr878Q9EQA9 314 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 P2ry6Q9ERK9 328 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 AcanQ61282 2132 aaKnown RBP6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gm11009F7CWA7 138 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr194L7N1Y8 306 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 B4galt1P15535 399 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Dvl1P51141 695 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gabrr1P56475 480 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 CebpdQ00322 268 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr1509Q7TQQ0 308 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Rnf152Q8BG47 203 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Faap24Q8BHL6 221 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 GldnQ8BMF8 549 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Prss35Q8C0F9 409 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Pqlc2Q8C4N4 293 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Ccdc115Q8VE99 180 aaKnown RBP6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr361Q8VF16 322 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr1280Q8VGG8 305 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Hspb2Q99PR8 182 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 MrnipQ9D1F5 335 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Dcbld1Q9D4J3 503 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Sec11cQ9D8V7 192 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Ociad2Q9D8W7 154 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Vmn1r47Q9EQ51 310 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Rnf7Q9WTZ1 113 aa6.95□□□□□ -1.3
Trim39-205ENSMUST00000173369 Ighv1-34A0A075B5V2 117 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Iglv3A0A0B4J1K5 122 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 A0A1Y7VLU2 103 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Atxn7l3A2AWT3 347 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr544E9PX47 334 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gm6665F6Y363 85 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Slc18a3O35304 530 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 DffbO54788 344 aaKnown RBP6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 P18525 117 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 UcnP81615 122 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Tpsab1Q02844 273 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr1507Q0VEP0 313 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Prok1Q14A28 105 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Tmem231Q3U284 315 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Mfsd4b3Q3UN21 355 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Lcn4Q62472 185 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Slc5a7Q8BGY9 580 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Kbtbd11Q8BNW9 633 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Slc25a41Q8BVN7 312 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Or51e2Q8VBV9 320 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr507Q8VG13 316 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Scgb3a1Q920D7 104 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Cyb5bQ9CQX2 146 aaKnown RBP6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gar1Q9CY66 231 aaKnown RBP6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Dmac2Q9D7K5 258 aaKnown RBP6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Q9D9C7 252 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Dctn5Q9QZB9 182 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Uchl1Q9R0P9 223 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Xirp2Q4U4S6 3784 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Olfr1314A2AVL6 312 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Gm6904E9PVF1 202 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Prss32E9Q409 334 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Ifna9P09235 190 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 Csf3P09920 208 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 UbdP63072 162 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 YrdcQ3U5F4 280 aa6.94□□□□□ -1.3
Trim39-205ENSMUST00000173369 HpQ61646 347 aa6.94□□□□□ -1.3
Retrieved 100 of 22,080 RNA–protein pairs in 90 ms