RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 RNASE11Q8TAA1 199 aaKnown RBP13.34□□□□□ -0.27
PTPN11-207ENST00000639857 GLYATL2Q8WU03 294 aa13.34□□□□□ -0.27
PTPN11-207ENST00000639857 NEURL2Q9BR09 285 aa13.34□□□□□ -0.27
PTPN11-207ENST00000639857 TUBA4BQ9H853 241 aa13.34□□□□□ -0.27
PTPN11-207ENST00000639857 CACFD1Q9UGQ2 172 aa13.34□□□□□ -0.27
PTPN11-207ENST00000639857 MLXQ9UH92 298 aa13.34□□□□□ -0.27
PTPN11-207ENST00000639857 K7EMT4 169 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 NUPL2O15504 423 aaKnown RBP13.33□□□□□ -0.28
PTPN11-207ENST00000639857 IFNA17P01571 189 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 S100A5P33763 92 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 SNCAP37840 140 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 MFAP4P55083 255 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 AP3S2P59780 193 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 GUCA2BQ16661 112 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 IZUMO4Q1ZYL8 232 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 ANKRD55Q3KP44 614 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 TM4SF20Q53R12 229 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 Q56UQ5 140 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 PVRIGQ6DKI7 326 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 SLC16A13Q7RTY0 426 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 OR52E5Q8NH55 327 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 IL22RA2Q969J5 263 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 MISP3Q96FF7 219 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 GALNT14Q96FL9 552 aa13.33□□□□□ -0.28
PTPN11-207ENST00000639857 TENM3Q9P273 2699 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 PIGBOS1A0A0B4J2F0 54 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 C15orf62A8K5M9 175 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 ADMP35318 185 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 SUB1P53999 127 aaKnown RBP eCLIP13.32□□□□□ -0.28
PTPN11-207ENST00000639857 BTNL8Q6UX41 500 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 UBAC2Q8NBM4 344 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 TRIM63Q969Q1 353 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 WDR89Q96FK6 387 aaPredicted RBP13.32□□□□□ -0.28
PTPN11-207ENST00000639857 SPATA25Q9BR10 227 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 CHRDL1Q9BU40 450 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 TMEM56-RWDD3S4R434 201 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 V9GYH0 126 aa13.32□□□□□ -0.28
PTPN11-207ENST00000639857 HUWE1Q7Z6Z7 4374 aaKnown RBP13.32□□□□□ -0.28
PTPN11-207ENST00000639857 IGHV3-21A0A0B4J1V1 117 aa13.31□□□□□ -0.28
PTPN11-207ENST00000639857 IGHV3-35A0A0C4DH35 117 aa13.31□□□□□ -0.28
PTPN11-207ENST00000639857 MT-CO2P00403 227 aa13.31□□□□□ -0.28
PTPN11-207ENST00000639857 CTSGP08311 255 aa13.31□□□□□ -0.28
PTPN11-207ENST00000639857 HOXA1P49639 335 aaPredicted RBP13.31□□□□□ -0.28
PTPN11-207ENST00000639857 SPCS3P61009 180 aa13.31□□□□□ -0.28
PTPN11-207ENST00000639857 SPAG8Q99932 426 aaPredicted RBP13.31□□□□□ -0.28
PTPN11-207ENST00000639857 ENY2Q9NPA8 101 aa13.31□□□□□ -0.28
PTPN11-207ENST00000639857 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.31□□□□□ -0.28
PTPN11-207ENST00000639857 MCUBQ9NWR8 336 aa13.31□□□□□ -0.28
PTPN11-207ENST00000639857 KCNIP3Q9Y2W7 256 aa13.31□□□□□ -0.28
PTPN11-207ENST00000639857 A0A0G2JRQ6 117 aa13.3□□□□□ -0.28
PTPN11-207ENST00000639857 CD7P09564 240 aa13.3□□□□□ -0.28
PTPN11-207ENST00000639857 KLF9Q13886 244 aaPredicted RBP13.3□□□□□ -0.28
PTPN11-207ENST00000639857 LINC00322Q6ZN03 302 aaPredicted RBP13.3□□□□□ -0.28
PTPN11-207ENST00000639857 RBPMS2Q6ZRY4 209 aaKnown RBP13.3□□□□□ -0.28
PTPN11-207ENST00000639857 SELENOHQ8IZQ5 122 aaKnown RBP13.3□□□□□ -0.28
PTPN11-207ENST00000639857 LHFPL5Q8TAF8 219 aa13.3□□□□□ -0.28
PTPN11-207ENST00000639857 OR11H12B2RN74 326 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 GNG7O60262 68 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 RNASE2P10153 161 aaKnown RBP13.29□□□□□ -0.28
PTPN11-207ENST00000639857 NPBWR1P48145 328 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 SRPXP78539 464 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 ZNF79Q15937 498 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 HAGHQ16775 308 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 BSXQ3C1V8 233 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 PYDC2Q56P42 97 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 SPINK9Q5DT21 86 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 TMEM268Q5VZI3 342 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 CCDC190Q86UF4 302 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 TOMM5Q8N4H5 51 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 DUSP18Q8NEJ0 188 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 OR52B4Q8NGK2 314 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 TMEM230Q96A57 120 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 PINX1Q96BK5 328 aaKnown RBP13.29□□□□□ -0.28
PTPN11-207ENST00000639857 OR10C1Q96KK4 312 aa13.29□□□□□ -0.28
PTPN11-207ENST00000639857 C3orf84H3BNL1 204 aa13.28□□□□□ -0.28
PTPN11-207ENST00000639857 TSPAN4O14817 238 aa13.28□□□□□ -0.28
PTPN11-207ENST00000639857 ANXA3P12429 323 aa13.28□□□□□ -0.28
PTPN11-207ENST00000639857 ETV6P41212 452 aa13.28□□□□□ -0.28
PTPN11-207ENST00000639857 TMEM187Q14656 261 aa13.28□□□□□ -0.28
PTPN11-207ENST00000639857 LAMTOR1Q6IAA8 161 aa13.28□□□□□ -0.28
PTPN11-207ENST00000639857 Q6ZRM9 215 aa13.28□□□□□ -0.28
PTPN11-207ENST00000639857 C20orf24Q9BUV8 137 aa13.28□□□□□ -0.28
PTPN11-207ENST00000639857 CACNG5Q9UF02 275 aa13.28□□□□□ -0.28
PTPN11-207ENST00000639857 A0A0B4J2A0 478 aa13.27□□□□□ -0.29
PTPN11-207ENST00000639857 SCGB2A1O75556 95 aa13.27□□□□□ -0.29
PTPN11-207ENST00000639857 SCAF4O95104 1147 aaKnown RBP13.27□□□□□ -0.29
PTPN11-207ENST00000639857 HTR2BP41595 481 aa13.27□□□□□ -0.29
PTPN11-207ENST00000639857 SPANXN2Q5MJ10 180 aa13.27□□□□□ -0.29
PTPN11-207ENST00000639857 ZNF414Q96IQ9 312 aa13.27□□□□□ -0.29
PTPN11-207ENST00000639857 CITED4Q96RK1 184 aa13.27□□□□□ -0.29
PTPN11-207ENST00000639857 SRD5A3Q9H8P0 318 aa13.27□□□□□ -0.29
PTPN11-207ENST00000639857 SHPKQ9UHJ6 478 aa13.27□□□□□ -0.29
PTPN11-207ENST00000639857 SULT1A3P0DMM9 295 aa13.26□□□□□ -0.29
PTPN11-207ENST00000639857 SULT1A4P0DMN0 295 aa13.26□□□□□ -0.29
PTPN11-207ENST00000639857 DEFB125Q8N687 156 aa13.26□□□□□ -0.29
PTPN11-207ENST00000639857 GPR146Q96CH1 333 aa13.26□□□□□ -0.29
PTPN11-207ENST00000639857 SLC25A21Q9BQT8 299 aaPredicted RBP13.26□□□□□ -0.29
PTPN11-207ENST00000639857 GINS3Q9BRX5 216 aa13.26□□□□□ -0.29
PTPN11-207ENST00000639857 DUXBA0A1W2PPF3 345 aa13.25□□□□□ -0.29
PTPN11-207ENST00000639857 CD5P06127 495 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms