RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 IGHV3-23P01764 117 aa12.92□□□□□ -0.34
CCNA1-203ENST00000625767 TRGV3P03979 118 aa12.92□□□□□ -0.34
CCNA1-203ENST00000625767 RLN2P04090 185 aa12.92□□□□□ -0.34
CCNA1-203ENST00000625767 CD28P10747 220 aa12.92□□□□□ -0.34
CCNA1-203ENST00000625767 TPPP2P59282 170 aa12.92□□□□□ -0.34
CCNA1-203ENST00000625767 RPL23AP62750 156 aaKnown RBP12.92□□□□□ -0.34
CCNA1-203ENST00000625767 RHOGP84095 191 aa12.92□□□□□ -0.34
CCNA1-203ENST00000625767 AWAT1Q58HT5 328 aa12.92□□□□□ -0.34
CCNA1-203ENST00000625767 OR8G2PQ6IF36 304 aa12.92□□□□□ -0.34
CCNA1-203ENST00000625767 TMEM14EPQ6UXP3 125 aa12.92□□□□□ -0.34
CCNA1-203ENST00000625767 MRPL41Q8IXM3 137 aaKnown RBP12.92□□□□□ -0.34
CCNA1-203ENST00000625767 THAP6Q8TBB0 222 aa12.92□□□□□ -0.34
CCNA1-203ENST00000625767 FNDC4Q9H6D8 234 aaPredicted RBP12.92□□□□□ -0.34
CCNA1-203ENST00000625767 LYRM2Q9NU23 88 aaPredicted RBP12.92□□□□□ -0.34
CCNA1-203ENST00000625767 STRAPQ9Y3F4 350 aaKnown RBP12.92□□□□□ -0.34
CCNA1-203ENST00000625767 TMEM89A2RUT3 159 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 TSC22D2O75157 780 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 PVALBP20472 110 aaPredicted RBP12.91□□□□□ -0.34
CCNA1-203ENST00000625767 RAB9AP51151 201 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 TAS2R30P59541 319 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 SLC35B1P78383 322 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 KIAA0141Q14154 515 aaPredicted RBP12.91□□□□□ -0.34
CCNA1-203ENST00000625767 PVRIGQ6DKI7 326 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 TEX38Q6PEX7 206 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 C18orf65Q6ZTR6 163 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 TCTE3Q8IZS6 198 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 TMEM252Q8N6L7 170 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 GON7Q9BXV9 100 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 MRPL36Q9P0J6 103 aaKnown RBP12.91□□□□□ -0.34
CCNA1-203ENST00000625767 FBXL7Q9UJT9 491 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 TRRAPQ9Y4A5 3859 aa12.91□□□□□ -0.34
CCNA1-203ENST00000625767 PRSS46E5RG02 174 aa12.9□□□□□ -0.34
CCNA1-203ENST00000625767 K7EIM0 57 aa12.9□□□□□ -0.34
CCNA1-203ENST00000625767 IGHV3-11P01762 117 aa12.9□□□□□ -0.34
CCNA1-203ENST00000625767 IFNA4P05014 189 aa12.9□□□□□ -0.34
CCNA1-203ENST00000625767 OR8U8P0C7N1 319 aa12.9□□□□□ -0.34
CCNA1-203ENST00000625767 PET100P0DJ07 73 aa12.9□□□□□ -0.34
CCNA1-203ENST00000625767 NHLH2Q02577 135 aa12.9□□□□□ -0.34
CCNA1-203ENST00000625767 ETV3LQ6ZN32 361 aa12.9□□□□□ -0.34
CCNA1-203ENST00000625767 ZFP57Q9NU63 452 aa12.9□□□□□ -0.34
CCNA1-203ENST00000625767 I3L2K1 104 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 MT-CO2P00403 227 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 SLC25A4P12235 298 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 P2RY1P47900 373 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 FGL1Q08830 312 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 FOXL1Q12952 345 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 FOXE3Q13461 319 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 TMEM217Q8N7C4 229 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 OR5B12Q96R08 314 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 RNF222A6NCQ9 220 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 OPRK1P41145 380 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 SUB1P53999 127 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCNA1-203ENST00000625767 EWSR1Q01844 656 aaKnown RBP eCLIP12.89□□□□□ -0.35
CCNA1-203ENST00000625767 KLK9Q2XQG4 91 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 C15orf32Q32M92 178 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 WFDC12Q8WWY7 111 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 GNB4Q9HAV0 340 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 KLK9Q9UKQ9 250 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 ANK2Q01484 3957 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 VWFP04275 2813 aa12.89□□□□□ -0.35
CCNA1-203ENST00000625767 ELANEP08246 267 aa12.88□□□□□ -0.35
CCNA1-203ENST00000625767 TMEM65Q6PI78 240 aa12.88□□□□□ -0.35
CCNA1-203ENST00000625767 ZNF546Q86UE3 836 aa12.88□□□□□ -0.35
CCNA1-203ENST00000625767 RNF152Q8N8N0 203 aa12.88□□□□□ -0.35
CCNA1-203ENST00000625767 MYOZ3Q8TDC0 251 aa12.88□□□□□ -0.35
CCNA1-203ENST00000625767 SCARB1Q8WTV0 552 aa12.88□□□□□ -0.35
CCNA1-203ENST00000625767 CITED2Q99967 270 aaPredicted RBP12.88□□□□□ -0.35
CCNA1-203ENST00000625767 TNFSF18Q9UNG2 199 aa12.88□□□□□ -0.35
CCNA1-203ENST00000625767 H3BUA1 57 aa12.87□□□□□ -0.35
CCNA1-203ENST00000625767 ARPC5O15511 151 aa12.87□□□□□ -0.35
CCNA1-203ENST00000625767 RPL12P30050 165 aaKnown RBP12.87□□□□□ -0.35
CCNA1-203ENST00000625767 AP2S1P53680 142 aaPredicted RBP12.87□□□□□ -0.35
CCNA1-203ENST00000625767 RAB11AP62491 216 aa12.87□□□□□ -0.35
CCNA1-203ENST00000625767 KHDC1LQ5JSQ8 128 aa12.87□□□□□ -0.35
CCNA1-203ENST00000625767 ACOT7LQ6ZUV0 252 aa12.87□□□□□ -0.35
CCNA1-203ENST00000625767 ZNF491Q8N8L2 437 aa12.87□□□□□ -0.35
CCNA1-203ENST00000625767 NECAP1Q8NC96 275 aa12.87□□□□□ -0.35
CCNA1-203ENST00000625767 OR4X2Q8NGF9 303 aa12.87□□□□□ -0.35
CCNA1-203ENST00000625767 F8W735 103 aaPredicted RBP12.86□□□□□ -0.35
CCNA1-203ENST00000625767 PFDN1O60925 122 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 BRI3O95415 125 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 TRBV12-3P01733 135 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 RPP30P78346 268 aaKnown RBP12.86□□□□□ -0.35
CCNA1-203ENST00000625767 RNASEH2CQ8TDP1 164 aaKnown RBP12.86□□□□□ -0.35
CCNA1-203ENST00000625767 CCDC140Q96MF4 163 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 SLA2Q9H6Q3 261 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 ZC4H2Q9NQZ6 224 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 A0A1B0GUS0 222 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 A0A1W2PRX2 142 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 LY86O95711 162 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 C1QBP02746 253 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 HIST1H1BP16401 226 aaKnown RBP12.86□□□□□ -0.35
CCNA1-203ENST00000625767 SULT1A1P50225 295 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 NKX2-5P52952 324 aaPredicted RBP12.86□□□□□ -0.35
CCNA1-203ENST00000625767 CD69Q07108 199 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 UBAC2Q8NBM4 344 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 OR1L6Q8NGR2 347 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 SMIM3Q9BZL3 60 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 WNK1Q9H4A3 2382 aa12.86□□□□□ -0.35
CCNA1-203ENST00000625767 FAM223BA6NKX1 122 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms