RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 ATP5G3P48201 142 aa15.88■□□□□ 0.13
PCDHB11-202ENST00000624887 RPL23P62829 140 aaKnown RBP15.88■□□□□ 0.13
PCDHB11-202ENST00000624887 ADIRFQ15847 76 aa15.88■□□□□ 0.13
PCDHB11-202ENST00000624887 CST9LP1Q5W188 147 aa15.88■□□□□ 0.13
PCDHB11-202ENST00000624887 OR4P4Q8NGL7 312 aa15.88■□□□□ 0.13
PCDHB11-202ENST00000624887 RNASEH2CQ8TDP1 164 aaKnown RBP15.88■□□□□ 0.13
PCDHB11-202ENST00000624887 SLC35E1Q96K37 410 aa15.88■□□□□ 0.13
PCDHB11-202ENST00000624887 AMMECR1Q9Y4X0 333 aaPredicted RBP15.88■□□□□ 0.13
PCDHB11-202ENST00000624887 TRAV20A0A0B4J274 112 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 C22orf46C9J442 243 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 SUB1P53999 127 aaKnown RBP eCLIP15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 SPATA31B1PQ5VZV4 182 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 HRNRQ86YZ3 2850 aaPredicted RBP15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 F6UZH7 168 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 CRYGBP07316 175 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 COX7A1P24310 79 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 GCHFRP30047 84 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 OR10J1P30954 320 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 CHODLQ9H9P2 273 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 ONECUT1Q9UBC0 465 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 DCHS2Q6V1P9 2916 aa15.87■□□□□ 0.13
PCDHB11-202ENST00000624887 HIVEP3Q5T1R4 2406 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 RPS10P46783 165 aaKnown RBP15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 GNB1P62873 340 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 MMD2Q8IY49 270 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 OR51G1Q8NGK1 321 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 TGIF2-C20orf24A0A0A6YYL0 155 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 A0A1W2PPI3 338 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 LY6LH3BQJ8 138 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 VENTXO95231 258 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 PRSS8Q16651 343 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 FAM78BQ5VT40 261 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 PNKDQ8N490 385 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 RPEQ96AT9 228 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 C19orf24Q9BVV8 132 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 FUT9Q9Y231 359 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 DMRT1Q9Y5R6 373 aa15.86■□□□□ 0.13
PCDHB11-202ENST00000624887 MT-CO2P00403 227 aa15.85■□□□□ 0.13
PCDHB11-202ENST00000624887 OR2T6Q8NHC8 308 aa15.85■□□□□ 0.13
PCDHB11-202ENST00000624887 A0A1W2PPR1 153 aa15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 FOXH1O75593 365 aa15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 PSG5Q15238 335 aa15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 SSX3Q99909 188 aa15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 FNDC4Q9H6D8 234 aaPredicted RBP15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 SIGLEC9Q9Y336 463 aa15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 ACACBO00763 2458 aa15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 GATA2P23769 480 aaPredicted RBP15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 CNTFRP26992 372 aa15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 MIR17HGQ75NE6 70 aa15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 MRPL41Q8IXM3 137 aaKnown RBP15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 DOK5Q9P104 306 aa15.84■□□□□ 0.13
PCDHB11-202ENST00000624887 IGLC7A0M8Q6 106 aa15.83■□□□□ 0.12
PCDHB11-202ENST00000624887 ACTL6BO94805 426 aa15.83■□□□□ 0.12
PCDHB11-202ENST00000624887 NDUFB4O95168 129 aa15.83■□□□□ 0.12
PCDHB11-202ENST00000624887 HOXA5P20719 270 aa15.83■□□□□ 0.12
PCDHB11-202ENST00000624887 KIAA0141Q14154 515 aaPredicted RBP15.83■□□□□ 0.12
PCDHB11-202ENST00000624887 C16orf82Q7Z2V1 217 aa15.83■□□□□ 0.12
PCDHB11-202ENST00000624887 ITLN2Q8WWU7 325 aaPredicted RBP15.83■□□□□ 0.12
PCDHB11-202ENST00000624887 ACY3Q96HD9 319 aa15.83■□□□□ 0.12
PCDHB11-202ENST00000624887 SSBP3Q9BWW4 388 aaPredicted RBP15.83■□□□□ 0.12
PCDHB11-202ENST00000624887 YTHDF2Q9Y5A9 579 aaKnown RBP15.83■□□□□ 0.12
PCDHB11-202ENST00000624887 NAV3Q8IVL0 2385 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 OR5G3P0C626 314 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 RPL27AP46776 148 aaKnown RBP15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 PVRIGQ6DKI7 326 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 OR11H6Q8NGC7 330 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 RNF5Q99942 180 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 SPTBN1Q01082 2364 aaKnown RBP15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 LOC105371242A0A075B767 164 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 M0R1W7 72 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 COMPP49747 757 aaPredicted RBP15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 ARF6P62330 175 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 TNXAQ16473 311 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 ZNF114Q8NC26 417 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 FAM210BQ96KR6 192 aa15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 TECRQ9NZ01 308 aaKnown RBP15.82■□□□□ 0.12
PCDHB11-202ENST00000624887 PLXNB1O43157 2135 aa15.81■□□□□ 0.12
PCDHB11-202ENST00000624887 TRBV24-1A0A075B6N3 115 aa15.81■□□□□ 0.12
PCDHB11-202ENST00000624887 REG1AP05451 166 aa15.81■□□□□ 0.12
PCDHB11-202ENST00000624887 DNLZQ5SXM8 178 aa15.81■□□□□ 0.12
PCDHB11-202ENST00000624887 PPP1R27Q86WC6 154 aa15.81■□□□□ 0.12
PCDHB11-202ENST00000624887 ANAPC16Q96DE5 110 aa15.81■□□□□ 0.12
PCDHB11-202ENST00000624887 ARL2-SNX15V9GYD0 113 aa15.81■□□□□ 0.12
PCDHB11-202ENST00000624887 LDLRAD2Q5SZI1 272 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 TPTE2P1Q5T6R2 138 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 LINC01551Q86U37 167 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 NPIPB3Q92617 1050 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 DERL1Q9BUN8 251 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 PSMB11A5LHX3 300 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 HTR1DP28221 377 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 CDX1P47902 265 aaPredicted RBP15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 PQLC2Q6ZP29 291 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 THAP8Q8NA92 274 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 TMEM37Q8WXS4 190 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 TMEM167BQ9NRX6 74 aa15.8■□□□□ 0.12
PCDHB11-202ENST00000624887 SCO2A0A1W2PP80 73 aa15.79■□□□□ 0.12
PCDHB11-202ENST00000624887 H7BYZ3 331 aa15.79■□□□□ 0.12
PCDHB11-202ENST00000624887 PFN1P07737 140 aaKnown RBP15.79■□□□□ 0.12
PCDHB11-202ENST00000624887 TAS2R45P59539 299 aa15.79■□□□□ 0.12
PCDHB11-202ENST00000624887 SSBP2P81877 361 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms