RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 AGFG2O95081 481 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 EFNB3Q15768 340 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 PRR31Q5SQ13 230 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 C19orf35Q6ZS72 473 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 FAM214BQ7L5A3 538 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 MUC15Q8N387 334 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 TMEM178AQ8NBL3 297 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 PPP1R35Q8TAP8 253 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 Q8TCH9 128 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 LSM4Q9Y4Z0 139 aaKnown RBP7.17□□□□□ -1.26
VCL-207ENST00000624354 SAA2-SAA4A0A096LPE2 208 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 TRBV9A0A0B4J1U6 114 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 TRAV3A0A0B4J244 114 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 TRGV8A0A0C4DH27 118 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 C9JCJ5 164 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 ZNF324O75467 553 aaPredicted RBP7.17□□□□□ -1.26
VCL-207ENST00000624354 IGKV3-15P01624 115 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 RIPPLY3P57055 190 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 RPL39P5Q59GN2 51 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 ATP1A1-AS1Q5TC04 95 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 STPG3Q8N7X2 389 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 CNEP1R1Q8N9A8 125 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 FAM216AQ8WUB2 273 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 MEGF9Q9H1U4 602 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 NAT8BQ9UHF3 227 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 LY96Q9Y6Y9 160 aa7.17□□□□□ -1.26
VCL-207ENST00000624354 A0A1W2PNU3 283 aaPredicted RBP7.16□□□□□ -1.26
VCL-207ENST00000624354 K7EN84 100 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 IGHV3-13P01766 116 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 IGHV3-7P01780 117 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 REG1AP05451 166 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 NTF3P20783 257 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 NPY1RP25929 384 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 KIR2DS2P43631 304 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 ZNF83P51522 516 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 MZT1Q08AG7 82 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 RPEL1Q2QD12 228 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 OR10J3Q5JRS4 329 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 OR4P4Q8NGL7 312 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 ENY2Q9NPA8 101 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 ARFGEF3Q5TH69 2177 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 TRAV9-2A0A087WT02 112 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 TRGV10A0A0A0MS01 117 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 CA2P00918 260 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 NBEAP1P0C6P0 100 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 ZNF883P0CG24 379 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 LGALS4P56470 323 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 SPATA31B1PQ5VZV4 182 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 OR4F17Q8NGA8 305 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 OR4S2Q8NH73 311 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 C11orf52Q96A22 123 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 EAF1Q96JC9 268 aaPredicted RBP7.16□□□□□ -1.26
VCL-207ENST00000624354 TRIB1Q96RU8 372 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 DUSP13Q9UII6 198 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 MED13LQ71F56 2210 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 ADGRG4Q8IZF6 3080 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 MGST3O14880 152 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 TCF15Q12870 199 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 KIAA1644Q3SXP7 199 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 AMMECR1LQ6DCA0 310 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 LCN12Q6JVE5 192 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 MMD2Q8IY49 270 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 FAM19A2Q8N3H0 131 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 RCHY1Q96PM5 261 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 GNB1LQ9BYB4 327 aa7.16□□□□□ -1.26
VCL-207ENST00000624354 C15orf61A6NNL5 157 aa7.15□□□□□ -1.26
VCL-207ENST00000624354 TAX1BP3O14907 124 aa7.15□□□□□ -1.26
VCL-207ENST00000624354 FRMD6-AS1P0C7T7 363 aa7.15□□□□□ -1.26
VCL-207ENST00000624354 LHFPL4Q7Z7J7 247 aa7.15□□□□□ -1.26
VCL-207ENST00000624354 FAM90A1Q86YD7 464 aa7.15□□□□□ -1.26
VCL-207ENST00000624354 TNFRSF14Q92956 283 aa7.15□□□□□ -1.26
VCL-207ENST00000624354 C1orf159Q96HA4 380 aa7.15□□□□□ -1.26
VCL-207ENST00000624354 IFI27L2Q9H2X8 130 aa7.15□□□□□ -1.26
VCL-207ENST00000624354 CLCF1Q9UBD9 225 aa7.15□□□□□ -1.26
VCL-207ENST00000624354 GAGE12BA1L429 117 aa7.15□□□□□ -1.27
VCL-207ENST00000624354 FOXH1O75593 365 aa7.15□□□□□ -1.27
VCL-207ENST00000624354 MT-ND6P03923 174 aa7.15□□□□□ -1.27
VCL-207ENST00000624354 CECR9P0C854 216 aa7.15□□□□□ -1.27
VCL-207ENST00000624354 HSPE1P61604 102 aaKnown RBP7.15□□□□□ -1.27
VCL-207ENST00000624354 WDR73Q6P4I2 378 aa7.15□□□□□ -1.27
VCL-207ENST00000624354 C16orf54Q6UWD8 224 aa7.15□□□□□ -1.27
VCL-207ENST00000624354 PRSS33Q8NF86 280 aa7.15□□□□□ -1.27
VCL-207ENST00000624354 SFXN3Q9BWM7 321 aa7.15□□□□□ -1.27
VCL-207ENST00000624354 CLEC7AQ9BXN2 247 aa7.15□□□□□ -1.27
VCL-207ENST00000624354 IGKV1D-17A0A075B6S4 117 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 OR2T8A6NH00 312 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 CGAP01215 116 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 AREGP15514 252 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 BMI1P35226 326 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 GNG4P50150 75 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 ZNF134P52741 427 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 OR8I2Q8N0Y5 310 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 OR2Z1Q8NG97 314 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 TMEM167BQ9NRX6 74 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 WASHC3Q9Y3C0 194 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 HELTA6NFD8 242 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 SRRM5B3KS81 715 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 CORTO00230 105 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 F2RL2O00254 374 aa7.14□□□□□ -1.27
VCL-207ENST00000624354 ACTL6BO94805 426 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms