RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 IFNA1P01562 189 aa22.2■■□□□ 1.14
FMR1-219ENST00000621453 SRP19P09132 144 aaKnown RBP22.2■■□□□ 1.14
FMR1-219ENST00000621453 PAX1P15863 534 aa22.2■■□□□ 1.14
FMR1-219ENST00000621453 IGKV1OR2-108A0A075B7D4 117 aa22.2■■□□□ 1.14
FMR1-219ENST00000621453 A0A1W2PPV4 95 aa22.2■■□□□ 1.14
FMR1-219ENST00000621453 AREGP15514 252 aa22.2■■□□□ 1.14
FMR1-219ENST00000621453 FBLN7Q53RD9 439 aa22.2■■□□□ 1.14
FMR1-219ENST00000621453 PRR20EP86478 221 aa22.19■■□□□ 1.14
FMR1-219ENST00000621453 PRR20CP86479 221 aa22.19■■□□□ 1.14
FMR1-219ENST00000621453 PRR20DP86480 221 aa22.19■■□□□ 1.14
FMR1-219ENST00000621453 PRR20BP86481 221 aa22.19■■□□□ 1.14
FMR1-219ENST00000621453 PRR20AP86496 221 aa22.19■■□□□ 1.14
FMR1-219ENST00000621453 PAX8Q06710 450 aa22.19■■□□□ 1.14
FMR1-219ENST00000621453 SREK1IP1Q8N9Q2 155 aaPredicted RBP22.19■■□□□ 1.14
FMR1-219ENST00000621453 FNDC4Q9H6D8 234 aaPredicted RBP22.19■■□□□ 1.14
FMR1-219ENST00000621453 ABCA2Q9BZC7 2435 aa22.19■■□□□ 1.14
FMR1-219ENST00000621453 APELAP0DMC3 54 aa22.18■■□□□ 1.14
FMR1-219ENST00000621453 NPBWR1P48145 328 aa22.18■■□□□ 1.14
FMR1-219ENST00000621453 EBI3Q14213 229 aa22.18■■□□□ 1.14
FMR1-219ENST00000621453 PVRIGQ6DKI7 326 aa22.18■■□□□ 1.14
FMR1-219ENST00000621453 OR2T6Q8NHC8 308 aa22.18■■□□□ 1.14
FMR1-219ENST00000621453 SLC45A2Q9UMX9 530 aa22.18■■□□□ 1.14
FMR1-219ENST00000621453 FAM208BQ5VWN6 2430 aa22.18■■□□□ 1.14
FMR1-219ENST00000621453 TMPRSS5Q9H3S3 457 aa22.17■■□□□ 1.14
FMR1-219ENST00000621453 SPG11Q96JI7 2443 aa22.17■■□□□ 1.14
FMR1-219ENST00000621453 UTP20O75691 2785 aaKnown RBP22.17■■□□□ 1.14
FMR1-219ENST00000621453 SAA4P35542 130 aa22.17■■□□□ 1.14
FMR1-219ENST00000621453 DSCR9P59020 149 aa22.17■■□□□ 1.14
FMR1-219ENST00000621453 SOHLH1Q5JUK2 328 aa22.17■■□□□ 1.14
FMR1-219ENST00000621453 RBMS3Q6XE24 437 aaKnown RBP22.17■■□□□ 1.14
FMR1-219ENST00000621453 AJUBAQ96IF1 538 aa22.17■■□□□ 1.14
FMR1-219ENST00000621453 CNIH1O95406 144 aa22.16■■□□□ 1.14
FMR1-219ENST00000621453 FBP1P09467 338 aa22.16■■□□□ 1.14
FMR1-219ENST00000621453 OR10J1P30954 320 aa22.16■■□□□ 1.14
FMR1-219ENST00000621453 C5orf64Q2M2E5 130 aa22.16■■□□□ 1.14
FMR1-219ENST00000621453 Q8N6K4 173 aa22.16■■□□□ 1.14
FMR1-219ENST00000621453 CLRN3Q8NCR9 226 aa22.16■■□□□ 1.14
FMR1-219ENST00000621453 OR1P1Q8NH06 330 aa22.16■■□□□ 1.14
FMR1-219ENST00000621453 ACY3Q96HD9 319 aa22.16■■□□□ 1.14
FMR1-219ENST00000621453 SRSF8Q9BRL6 282 aaKnown RBP22.16■■□□□ 1.14
FMR1-219ENST00000621453 VAX2Q9UIW0 290 aa22.16■■□□□ 1.14
FMR1-219ENST00000621453 LINC00869P0C866 280 aa22.15■■□□□ 1.14
FMR1-219ENST00000621453 CENPVL3A0A0U1RRI6 287 aa22.15■■□□□ 1.14
FMR1-219ENST00000621453 NPFFO15130 113 aa22.15■■□□□ 1.14
FMR1-219ENST00000621453 MFAP2P55001 183 aa22.15■■□□□ 1.14
FMR1-219ENST00000621453 CYB561D1Q8N8Q1 229 aa22.15■■□□□ 1.14
FMR1-219ENST00000621453 SUN5Q8TC36 379 aa22.15■■□□□ 1.14
FMR1-219ENST00000621453 F11RQ9Y624 299 aaKnown RBP22.15■■□□□ 1.14
FMR1-219ENST00000621453 CRYBG3Q68DQ2 2970 aa22.15■■□□□ 1.14
FMR1-219ENST00000621453 DNASE2O00115 360 aaPredicted RBP22.14■■□□□ 1.13
FMR1-219ENST00000621453 ETFRF1Q6IPR1 90 aa22.14■■□□□ 1.13
FMR1-219ENST00000621453 SLC35E3Q7Z769 313 aa22.14■■□□□ 1.13
FMR1-219ENST00000621453 MISP3Q96FF7 219 aa22.14■■□□□ 1.13
FMR1-219ENST00000621453 CORTO00230 105 aa22.13■■□□□ 1.13
FMR1-219ENST00000621453 TMEM11P17152 192 aa22.13■■□□□ 1.13
FMR1-219ENST00000621453 TMEM249Q2WGJ8 235 aa22.13■■□□□ 1.13
FMR1-219ENST00000621453 C19orf35Q6ZS72 473 aa22.13■■□□□ 1.13
FMR1-219ENST00000621453 IQCF2Q8IXL9 164 aa22.13■■□□□ 1.13
FMR1-219ENST00000621453 MANBALQ9NQG1 85 aa22.13■■□□□ 1.13
FMR1-219ENST00000621453 LRRK2Q5S007 2527 aa22.13■■□□□ 1.13
FMR1-219ENST00000621453 CEBPGP53567 150 aa22.13■■□□□ 1.13
FMR1-219ENST00000621453 ABHD5Q8WTS1 349 aa22.13■■□□□ 1.13
FMR1-219ENST00000621453 FAM74A7A6NL05 159 aa22.12■■□□□ 1.13
FMR1-219ENST00000621453 NCBP2LA6PVI3 153 aaKnown RBP22.12■■□□□ 1.13
FMR1-219ENST00000621453 STAG3L2P0CL84 134 aa22.12■■□□□ 1.13
FMR1-219ENST00000621453 STAG3L3P0CL85 134 aa22.12■■□□□ 1.13
FMR1-219ENST00000621453 RHOBP62745 196 aa22.12■■□□□ 1.13
FMR1-219ENST00000621453 FAM74A3Q4VXF1 159 aa22.12■■□□□ 1.13
FMR1-219ENST00000621453 PIP4P2Q8N4L2 257 aa22.12■■□□□ 1.13
FMR1-219ENST00000621453 NPIPB3Q92617 1050 aa22.12■■□□□ 1.13
FMR1-219ENST00000621453 TMA7Q9Y2S6 64 aaKnown RBP22.12■■□□□ 1.13
FMR1-219ENST00000621453 FAM106CPP0CH98 169 aa22.11■■□□□ 1.13
FMR1-219ENST00000621453 BRS3P32247 399 aa22.11■■□□□ 1.13
FMR1-219ENST00000621453 TAGLN2P37802 199 aaKnown RBP22.11■■□□□ 1.13
FMR1-219ENST00000621453 PSMB3P49720 205 aa22.11■■□□□ 1.13
FMR1-219ENST00000621453 FXYD3Q14802 87 aa22.11■■□□□ 1.13
FMR1-219ENST00000621453 NUPL2O15504 423 aaKnown RBP22.11■■□□□ 1.13
FMR1-219ENST00000621453 IGHV3-48P01763 117 aa22.11■■□□□ 1.13
FMR1-219ENST00000621453 CRYGCP07315 174 aa22.11■■□□□ 1.13
FMR1-219ENST00000621453 GATA2P23769 480 aaPredicted RBP22.11■■□□□ 1.13
FMR1-219ENST00000621453 CYP2G1PQ6ZSU1 146 aa22.11■■□□□ 1.13
FMR1-219ENST00000621453 SEPSECSQ9HD40 501 aaKnown RBP22.11■■□□□ 1.13
FMR1-219ENST00000621453 CLEC12BQ2HXU8 276 aa22.1■■□□□ 1.13
FMR1-219ENST00000621453 THAP8Q8NA92 274 aa22.1■■□□□ 1.13
FMR1-219ENST00000621453 MRPL36Q9P0J6 103 aaKnown RBP22.1■■□□□ 1.13
FMR1-219ENST00000621453 SVEP1Q4LDE5 3571 aa22.1■■□□□ 1.13
FMR1-219ENST00000621453 SLC25A16P16260 332 aa22.09■■□□□ 1.13
FMR1-219ENST00000621453 COL8A1P27658 744 aa22.09■■□□□ 1.13
FMR1-219ENST00000621453 MEF2BQ02080 365 aaPredicted RBP22.09■■□□□ 1.13
FMR1-219ENST00000621453 SLC25A33Q9BSK2 321 aa22.09■■□□□ 1.13
FMR1-219ENST00000621453 MSMBP08118 114 aa22.09■■□□□ 1.13
FMR1-219ENST00000621453 RND2P52198 227 aa22.09■■□□□ 1.13
FMR1-219ENST00000621453 FAM120AOSQ5T036 256 aa22.09■■□□□ 1.13
FMR1-219ENST00000621453 ZNF562Q6V9R5 426 aa22.09■■□□□ 1.13
FMR1-219ENST00000621453 GATAD1Q8WUU5 269 aa22.09■■□□□ 1.13
FMR1-219ENST00000621453 CXorf1O96002 111 aa22.08■■□□□ 1.13
FMR1-219ENST00000621453 ARL14EPLP0DKL9 152 aa22.08■■□□□ 1.13
FMR1-219ENST00000621453 CTRB1P17538 263 aa22.08■■□□□ 1.13
FMR1-219ENST00000621453 AWAT1Q58HT5 328 aa22.08■■□□□ 1.13
FMR1-219ENST00000621453 CTRB2Q6GPI1 263 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms