RNA–Protein interactions for RNA: ENST00000618819.4

PTPN9-206, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN9, Length 7,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-206ENST00000618819 KDM3BQ7LBC6 1761 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 ZNF415Q09FC8 603 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 C1orf210Q8IVY1 113 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 C1orf174Q8IYL3 243 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 KLF12Q9Y4X4 402 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 C21orf140B9A014 251 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 UMODP07911 640 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 MORN3Q6PF18 240 aaPredicted RBP12.19□□□□□ -0.46
PTPN9-206ENST00000618819 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.19□□□□□ -0.46
PTPN9-206ENST00000618819 LAGE3Q14657 143 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 C1orf194Q5T5A4 169 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 SRXN1Q9BYN0 137 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 PILRBQ9UKJ0 227 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 RGPD2P0DJD1 1756 aa12.19□□□□□ -0.46
PTPN9-206ENST00000618819 FAM181AQ8N9Y4 354 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 FBLIM1Q8WUP2 373 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 CHCHD5Q9BSY4 110 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 NEUROG3Q9Y4Z2 214 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 RICTORQ6R327 1708 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 FAM201AQ5SY85 155 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 PPP1R27Q86WC6 154 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 SCN2AQ99250 2005 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 SLC25A28Q96A46 364 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 NUP98P52948 1817 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 IGHV1-69-2A0A0G2JMI3 117 aa12.18□□□□□ -0.46
PTPN9-206ENST00000618819 SMAD7O15105 426 aaKnown RBP12.18□□□□□ -0.46
PTPN9-206ENST00000618819 SRD5A1P18405 259 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 ACTL10Q5JWF8 245 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 DDX60Q8IY21 1712 aaKnown RBP12.17□□□□□ -0.46
PTPN9-206ENST00000618819 VGLL1Q99990 258 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 OR5P3Q8WZ94 311 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 TRGV4A0A0C4DH28 118 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 ARPC1AQ92747 370 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 C12orf77C9JDV5 145 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 NDUFA2O43678 99 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 D6R8Y8 96 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 WBP1LQ9NX94 342 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 HS3ST3B1Q9Y662 390 aa12.17□□□□□ -0.46
PTPN9-206ENST00000618819 SHISA3A0PJX4 238 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 IGHV1-45A0A0A0MS14 117 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 SPAARA0A1B0GVQ0 90 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 FAM90A2PQ658T7 463 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 VSIRQ9H7M9 311 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 RP1P56715 2156 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 STHQ8IWL8 128 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 TMEM256Q8N2U0 113 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 ASCL2Q99929 193 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 TMEM8BA6NDV4 472 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 OSTCQ9NRP0 149 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 PATE3B3GLJ2 98 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 RNF126Q9BV68 326 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 PSG8Q9UQ74 426 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 COX6B1P14854 86 aa12.16□□□□□ -0.46
PTPN9-206ENST00000618819 ANKRD31Q8N7Z5 1873 aa12.15□□□□□ -0.46
PTPN9-206ENST00000618819 CD160O95971 181 aa12.15□□□□□ -0.46
PTPN9-206ENST00000618819 GLRX5Q86SX6 157 aa12.15□□□□□ -0.46
PTPN9-206ENST00000618819 DOT1LQ8TEK3 1739 aa12.15□□□□□ -0.46
PTPN9-206ENST00000618819 SRSF8Q9BRL6 282 aaKnown RBP12.15□□□□□ -0.46
PTPN9-206ENST00000618819 ZNF474Q6S9Z5 364 aaPredicted RBP12.15□□□□□ -0.47
PTPN9-206ENST00000618819 OR13A1Q8NGR1 328 aa12.15□□□□□ -0.47
PTPN9-206ENST00000618819 COL16A1Q07092 1604 aaPredicted RBP12.14□□□□□ -0.47
PTPN9-206ENST00000618819 PRR33A8MZF0 331 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 EREGO14944 169 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 MLNRO43193 412 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 TEX38Q6PEX7 206 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 TSSC4Q9Y5U2 329 aaPredicted RBP12.14□□□□□ -0.47
PTPN9-206ENST00000618819 ATP5J2P56134 94 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
PTPN9-206ENST00000618819 F8WEM9 126 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 CXCL10P02778 98 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 PRB1P04280 392 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 ATP5IP56385 69 aaPredicted RBP12.14□□□□□ -0.47
PTPN9-206ENST00000618819 ANAPC10Q9UM13 185 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 MIA3Q5JRA6 1907 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 COLCA2A8K830 154 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 ACP7Q6ZNF0 438 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 WFDC1Q9HC57 220 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 TFF2Q03403 129 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 C3orf36Q3SXR2 165 aa12.14□□□□□ -0.47
PTPN9-206ENST00000618819 GREM1O60565 184 aa12.13□□□□□ -0.47
PTPN9-206ENST00000618819 TRACP01848 142 aa12.13□□□□□ -0.47
PTPN9-206ENST00000618819 TMEM167AQ8TBQ9 72 aa12.13□□□□□ -0.47
PTPN9-206ENST00000618819 TSKUQ8WUA8 353 aa12.13□□□□□ -0.47
PTPN9-206ENST00000618819 OSR1Q8TAX0 266 aaPredicted RBP12.13□□□□□ -0.47
PTPN9-206ENST00000618819 UCP1P25874 307 aa12.13□□□□□ -0.47
PTPN9-206ENST00000618819 C18orf12Q96KH6 178 aa12.13□□□□□ -0.47
PTPN9-206ENST00000618819 TIMP3P35625 211 aa12.13□□□□□ -0.47
PTPN9-206ENST00000618819 KLF17Q5JT82 389 aaPredicted RBP12.13□□□□□ -0.47
PTPN9-206ENST00000618819 TCRAP04437 139 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 C5orf47Q569G3 176 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 PLPPR1Q8TBJ4 325 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 MBNL3Q9NUK0 354 aaKnown RBP12.12□□□□□ -0.47
PTPN9-206ENST00000618819 KNL1Q8NG31 2342 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 IGKV2-40A0A087WW87 121 aaPredicted RBP12.12□□□□□ -0.47
PTPN9-206ENST00000618819 IGKV2D-40P01614 121 aaPredicted RBP12.12□□□□□ -0.47
PTPN9-206ENST00000618819 ABHD17AQ96GS6 310 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 CCL19Q99731 98 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 IGKV1-8A0A0C4DH67 115 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 RAMP3O60896 148 aa12.12□□□□□ -0.47
PTPN9-206ENST00000618819 PPBPP02775 128 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms