RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 SLC35G3Q8N808 338 aa18.89■□□□□ 0.61
VEGFA-228ENST00000617771 PDCD10Q9BUL8 212 aa18.89■□□□□ 0.61
VEGFA-228ENST00000617771 C14orf166Q9Y224 244 aaKnown RBP18.89■□□□□ 0.61
VEGFA-228ENST00000617771 MT-CO2P00403 227 aa18.88■□□□□ 0.61
VEGFA-228ENST00000617771 CTSGP08311 255 aa18.88■□□□□ 0.61
VEGFA-228ENST00000617771 P0C879 139 aa18.88■□□□□ 0.61
VEGFA-228ENST00000617771 UCP1P25874 307 aa18.88■□□□□ 0.61
VEGFA-228ENST00000617771 SP6Q3SY56 376 aa18.88■□□□□ 0.61
VEGFA-228ENST00000617771 FAAP20Q6NZ36 180 aa18.88■□□□□ 0.61
VEGFA-228ENST00000617771 RNASE11Q8TAA1 199 aaKnown RBP18.88■□□□□ 0.61
VEGFA-228ENST00000617771 RRNAD1Q96FB5 475 aaKnown RBP18.88■□□□□ 0.61
VEGFA-228ENST00000617771 SPAG8Q99932 426 aaPredicted RBP18.88■□□□□ 0.61
VEGFA-228ENST00000617771 A0A0B4J293 547 aa18.87■□□□□ 0.61
VEGFA-228ENST00000617771 C15orf62A8K5M9 175 aa18.87■□□□□ 0.61
VEGFA-228ENST00000617771 ST8SIA3O43173 380 aa18.87■□□□□ 0.61
VEGFA-228ENST00000617771 IFNA17P01571 189 aa18.87■□□□□ 0.61
VEGFA-228ENST00000617771 AKAIN1P0CW23 69 aa18.87■□□□□ 0.61
VEGFA-228ENST00000617771 SNCAP37840 140 aa18.87■□□□□ 0.61
VEGFA-228ENST00000617771 RPL5P46777 297 aaKnown RBP18.87■□□□□ 0.61
VEGFA-228ENST00000617771 SURF2Q15527 256 aaPredicted RBP18.87■□□□□ 0.61
VEGFA-228ENST00000617771 SPINK9Q5DT21 86 aa18.87■□□□□ 0.61
VEGFA-228ENST00000617771 PINX1Q96BK5 328 aaKnown RBP18.87■□□□□ 0.61
VEGFA-228ENST00000617771 C6orf62Q9GZU0 229 aaPredicted RBP18.87■□□□□ 0.61
VEGFA-228ENST00000617771 RETNQ9HD89 108 aa18.87■□□□□ 0.61
VEGFA-228ENST00000617771 INS-IGF2F8WCM5 200 aa18.86■□□□□ 0.61
VEGFA-228ENST00000617771 TSPAN4O14817 238 aa18.86■□□□□ 0.61
VEGFA-228ENST00000617771 NBEAL2Q6ZNJ1 2754 aa18.85■□□□□ 0.61
VEGFA-228ENST00000617771 IGHV3OR16-8A0A075B7F1 116 aa18.85■□□□□ 0.61
VEGFA-228ENST00000617771 OR4C16Q8NGL9 310 aa18.85■□□□□ 0.61
VEGFA-228ENST00000617771 TEX13DA0A0J9YY54 714 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-228ENST00000617771 ZNF207O43670 478 aaKnown RBP18.84■□□□□ 0.61
VEGFA-228ENST00000617771 GNG7O60262 68 aa18.84■□□□□ 0.61
VEGFA-228ENST00000617771 YIF1AO95070 293 aa18.84■□□□□ 0.61
VEGFA-228ENST00000617771 HOXA1P49639 335 aaPredicted RBP18.84■□□□□ 0.61
VEGFA-228ENST00000617771 SUB1P53999 127 aaKnown RBP eCLIP18.84■□□□□ 0.61
VEGFA-228ENST00000617771 PRRT1Q99946 306 aa18.84■□□□□ 0.61
VEGFA-228ENST00000617771 GGTLC1Q9BX51 225 aa18.84■□□□□ 0.61
VEGFA-228ENST00000617771 TMEM222Q9H0R3 208 aa18.84■□□□□ 0.61
VEGFA-228ENST00000617771 NAA60Q9H7X0 242 aa18.84■□□□□ 0.61
VEGFA-228ENST00000617771 ENY2Q9NPA8 101 aa18.84■□□□□ 0.61
VEGFA-228ENST00000617771 RSL24D1Q9UHA3 163 aaKnown RBP18.84■□□□□ 0.61
VEGFA-228ENST00000617771 LOC102724200A0A096LPH7 203 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-228ENST00000617771 H3BMQ9 156 aa18.83■□□□□ 0.6
VEGFA-228ENST00000617771 IGHV3-48P01763 117 aa18.83■□□□□ 0.6
VEGFA-228ENST00000617771 OR5AC1P0C628 307 aa18.83■□□□□ 0.6
VEGFA-228ENST00000617771 FAM219AQ8IW50 185 aa18.83■□□□□ 0.6
VEGFA-228ENST00000617771 FAM110AQ9BQ89 295 aa18.83■□□□□ 0.6
VEGFA-228ENST00000617771 RTBDNQ9BSG5 229 aaPredicted RBP18.83■□□□□ 0.6
VEGFA-228ENST00000617771 NXF2Q9GZY0 626 aaKnown RBP18.83■□□□□ 0.6
VEGFA-228ENST00000617771 CORTO00230 105 aa18.82■□□□□ 0.6
VEGFA-228ENST00000617771 GSTZ1O43708 216 aaPredicted RBP18.82■□□□□ 0.6
VEGFA-228ENST00000617771 CDS2O95674 445 aa18.82■□□□□ 0.6
VEGFA-228ENST00000617771 ETV6P41212 452 aa18.82■□□□□ 0.6
VEGFA-228ENST00000617771 NPBWR1P48145 328 aa18.82■□□□□ 0.6
VEGFA-228ENST00000617771 DHODHQ02127 395 aa18.82■□□□□ 0.6
VEGFA-228ENST00000617771 ZFAND6Q6FIF0 208 aa18.82■□□□□ 0.6
VEGFA-228ENST00000617771 DUSP18Q8NEJ0 188 aa18.82■□□□□ 0.6
VEGFA-228ENST00000617771 SLIRPQ9GZT3 109 aaKnown RBP18.82■□□□□ 0.6
VEGFA-228ENST00000617771 SMPXQ9UHP9 88 aa18.82■□□□□ 0.6
VEGFA-228ENST00000617771 A0A0G2JRQ6 117 aa18.81■□□□□ 0.6
VEGFA-228ENST00000617771 IGHV7-4-1A0A0J9YVY3 117 aa18.81■□□□□ 0.6
VEGFA-228ENST00000617771 TMEM116Q8NCL8 245 aa18.81■□□□□ 0.6
VEGFA-228ENST00000617771 RBPMSQ93062 196 aaKnown RBP18.81■□□□□ 0.6
VEGFA-228ENST00000617771 OR10C1Q96KK4 312 aa18.81■□□□□ 0.6
VEGFA-228ENST00000617771 GPR132Q9UNW8 380 aa18.81■□□□□ 0.6
VEGFA-228ENST00000617771 ANKRD20A5PA0PJZ0 165 aa18.8■□□□□ 0.6
VEGFA-228ENST00000617771 OR4C46A6NHA9 309 aa18.8■□□□□ 0.6
VEGFA-228ENST00000617771 CRYM-AS1A6NIL9 109 aa18.8■□□□□ 0.6
VEGFA-228ENST00000617771 OR51S1Q8NGJ8 323 aa18.8■□□□□ 0.6
VEGFA-228ENST00000617771 GLYATL2Q8WU03 294 aa18.8■□□□□ 0.6
VEGFA-228ENST00000617771 ZNF414Q96IQ9 312 aa18.8■□□□□ 0.6
VEGFA-228ENST00000617771 SCP2D1Q9UJQ7 156 aa18.8■□□□□ 0.6
VEGFA-228ENST00000617771 RYR3Q15413 4870 aa18.79■□□□□ 0.6
VEGFA-228ENST00000617771 RNASE2P10153 161 aaKnown RBP18.79■□□□□ 0.6
VEGFA-228ENST00000617771 PVRIGQ6DKI7 326 aa18.79■□□□□ 0.6
VEGFA-228ENST00000617771 MCFD2Q8NI22 146 aa18.79■□□□□ 0.6
VEGFA-228ENST00000617771 GINS3Q9BRX5 216 aa18.79■□□□□ 0.6
VEGFA-228ENST00000617771 RHPN1-AS1Q9BWJ2 59 aa18.79■□□□□ 0.6
VEGFA-228ENST00000617771 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.79■□□□□ 0.6
VEGFA-228ENST00000617771 UBQLN2Q9UHD9 624 aa18.79■□□□□ 0.6
VEGFA-228ENST00000617771 TRAV14DV4A0A0A6YYC5 116 aa18.78■□□□□ 0.6
VEGFA-228ENST00000617771 FABP12A6NFH5 140 aa18.78■□□□□ 0.6
VEGFA-228ENST00000617771 CHEK1O14757 476 aa18.78■□□□□ 0.6
VEGFA-228ENST00000617771 TNFSF8P32971 234 aa18.78■□□□□ 0.6
VEGFA-228ENST00000617771 SPCS3P61009 180 aa18.78■□□□□ 0.6
VEGFA-228ENST00000617771 Q6ZRM9 215 aa18.78■□□□□ 0.6
VEGFA-228ENST00000617771 SELENOHQ8IZQ5 122 aaKnown RBP18.78■□□□□ 0.6
VEGFA-228ENST00000617771 OR52E5Q8NH55 327 aa18.78■□□□□ 0.6
VEGFA-228ENST00000617771 LHFPL5Q8TAF8 219 aa18.78■□□□□ 0.6
VEGFA-228ENST00000617771 SCGB3A2Q96PL1 93 aa18.78■□□□□ 0.6
VEGFA-228ENST00000617771 BMI1P35226 326 aa18.77■□□□□ 0.6
VEGFA-228ENST00000617771 AARDQ4LEZ3 155 aa18.77■□□□□ 0.6
VEGFA-228ENST00000617771 TMEM268Q5VZI3 342 aa18.77■□□□□ 0.6
VEGFA-228ENST00000617771 IL17DQ8TAD2 202 aa18.77■□□□□ 0.6
VEGFA-228ENST00000617771 RNF2Q99496 336 aa18.77■□□□□ 0.6
VEGFA-228ENST00000617771 MCUBQ9NWR8 336 aa18.77■□□□□ 0.6
VEGFA-228ENST00000617771 ZNF600Q6ZNG1 722 aa18.76■□□□□ 0.59
VEGFA-228ENST00000617771 SOSTQ9BQB4 213 aa18.76■□□□□ 0.59
VEGFA-228ENST00000617771 KCNIP3Q9Y2W7 256 aa18.76■□□□□ 0.59
VEGFA-228ENST00000617771 IGHV3-49A0A0A0MS15 119 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms