RNA–Protein interactions for RNA: ENST00000613744.4

POLR2J3-220, Transcript of RNA polymerase II subunit J3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene POLR2J3, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-220ENST00000613744 OR8B3Q8NGG8 313 aa18.02■□□□□ 0.48
POLR2J3-220ENST00000613744 OR8B2Q96RD0 313 aa18.02■□□□□ 0.48
POLR2J3-220ENST00000613744 VPS25Q9BRG1 176 aa18.02■□□□□ 0.48
POLR2J3-220ENST00000613744 CST9LQ9H4G1 147 aa18.02■□□□□ 0.48
POLR2J3-220ENST00000613744 JKAMPQ9P055 326 aa18.02■□□□□ 0.48
POLR2J3-220ENST00000613744 MYO18BQ8IUG5 2567 aa18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 RBMXL2O75526 392 aaKnown RBP18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 TOX4O94842 621 aa18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 OR2H2O95918 312 aa18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 APCSP02743 223 aa18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 PLA2G2AP14555 144 aa18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 GRNP28799 593 aaKnown RBP18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 RPS16P62249 146 aaKnown RBP18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 ITLN2Q8WWU7 325 aaPredicted RBP18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 BCL2L2Q92843 193 aaPredicted RBP18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 SLC25A10Q9UBX3 287 aaPredicted RBP18.02■□□□□ 0.47
POLR2J3-220ENST00000613744 C5orf49A4QMS7 147 aa18.01■□□□□ 0.47
POLR2J3-220ENST00000613744 C17orf98A8MV24 154 aa18.01■□□□□ 0.47
POLR2J3-220ENST00000613744 KLF5Q13887 457 aaPredicted RBP18.01■□□□□ 0.47
POLR2J3-220ENST00000613744 OR52E5Q8NH55 327 aa18.01■□□□□ 0.47
POLR2J3-220ENST00000613744 GALMQ96C23 342 aa18.01■□□□□ 0.47
POLR2J3-220ENST00000613744 C1RLQ9NZP8 487 aa18.01■□□□□ 0.47
POLR2J3-220ENST00000613744 BRWD1-AS2P59051 145 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 C5orf30Q96GV9 206 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 IZUMO1RA6ND01 250 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 HELTA6NFD8 242 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 PRSS46E5RG02 174 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 CCNOP22674 350 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 TIGITQ495A1 244 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 CENPWQ5EE01 88 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 MIC13Q5XKP0 118 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 Q6ZVH6 145 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 C18orf32Q8TCD1 76 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 HSD17B10Q99714 261 aaKnown RBP18■□□□□ 0.47
POLR2J3-220ENST00000613744 ST20Q9HBF5 79 aa18■□□□□ 0.47
POLR2J3-220ENST00000613744 GABRA6Q16445 453 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 KIAA1644Q3SXP7 199 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 BHLHA15Q7RTS1 189 aaPredicted RBP17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 COMMD5Q9GZQ3 224 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 CSTL1Q9H114 145 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 TMEM167BQ9NRX6 74 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 IL19Q9UHD0 177 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 POLDIP2Q9Y2S7 368 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 LSM4Q9Y4Z0 139 aaKnown RBP17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 UBR5O95071 2799 aaPredicted RBP17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 FAM181BA6NEQ2 426 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 AGFG2O95081 481 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 HOXC12P31275 282 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 ERVK11-1P61568 191 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 UBE2G1P62253 170 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 SRSF1Q07955 248 aaKnown RBP eCLIP17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 ZNF146Q15072 292 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 FAM162BQ5T6X4 162 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 PET117Q6UWS5 81 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 MS4A5Q9H3V2 200 aa17.99■□□□□ 0.47
POLR2J3-220ENST00000613744 CCL2P13500 99 aa17.98■□□□□ 0.47
POLR2J3-220ENST00000613744 IGLL1P15814 213 aa17.98■□□□□ 0.47
POLR2J3-220ENST00000613744 ARR3P36575 388 aa17.98■□□□□ 0.47
POLR2J3-220ENST00000613744 EFNB3Q15768 340 aa17.98■□□□□ 0.47
POLR2J3-220ENST00000613744 C22orf34Q6ZV56 151 aa17.98■□□□□ 0.47
POLR2J3-220ENST00000613744 NANOS1Q8WY41 292 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-220ENST00000613744 NPVFQ9HCQ7 196 aa17.98■□□□□ 0.47
POLR2J3-220ENST00000613744 CHTOPQ9Y3Y2 248 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-220ENST00000613744 PRR14LQ5THK1 2151 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 TMEM30CPA0ZSE6 113 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 CBY3A6NI87 242 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 NTF3P20783 257 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 REG1BP48304 166 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 MDP1Q86V88 176 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 FAM19A2Q8N3H0 131 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 SMIM12Q96EX1 92 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 ZNF331Q9NQX6 463 aaPredicted RBP17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 HSBP1O75506 76 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 RHBDL1O75783 438 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 RTL8AQ9BWD3 113 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 SAP30LQ9HAJ7 183 aa17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 SEPSECSQ9HD40 501 aaKnown RBP17.97■□□□□ 0.47
POLR2J3-220ENST00000613744 SPTBN1Q01082 2364 aaKnown RBP17.96■□□□□ 0.47
POLR2J3-220ENST00000613744 OOEPA6NGQ2 149 aa17.96■□□□□ 0.47
POLR2J3-220ENST00000613744 J3QKU1 62 aa17.96■□□□□ 0.47
POLR2J3-220ENST00000613744 K7ERU9 68 aa17.96■□□□□ 0.47
POLR2J3-220ENST00000613744 RAB31Q13636 194 aa17.96■□□□□ 0.47
POLR2J3-220ENST00000613744 LDLRAD2Q5SZI1 272 aa17.96■□□□□ 0.47
POLR2J3-220ENST00000613744 ZNF808Q8N4W9 903 aaPredicted RBP17.96■□□□□ 0.47
POLR2J3-220ENST00000613744 C16orf97H3BN30 126 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 TAX1BP3O14907 124 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 USF1P22415 310 aaPredicted RBP17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 CA6P23280 308 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 NPY1RP25929 384 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 VDAC2P45880 294 aaPredicted RBP17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 RTL8BQ17RB0 113 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 MAJINQ3KP22 176 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 ATOH7Q8N100 152 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 DEFB125Q8N687 156 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 NINJ1Q92982 152 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 M0QZ24 198 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 NGFP01138 241 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 PLP2Q04941 152 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 SPINK9Q5DT21 86 aa17.95■□□□□ 0.46
POLR2J3-220ENST00000613744 LCN12Q6JVE5 192 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms