RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 PRNTQ86SH4 94 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 ODF3L1Q8IXM7 274 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 C11orf42Q8N5U0 333 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 PGLYRP4Q96LB8 373 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 MRPL37Q9BZE1 423 aaKnown RBP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 A6NNC1 897 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 M0QZK8 103 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 DLL1O00548 723 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 GGCTO75223 188 aaKnown RBP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 CSN1S1P47710 185 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 TFPI2P48307 235 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 RELQ04864 619 aaPredicted RBP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 LBHQ53QV2 105 aaPredicted RBP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 ASPHD1Q5U4P2 390 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 ETFRF1Q6IPR1 90 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 PRSS3P2Q8NHM4 247 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 PERPQ96FX8 193 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 RNF2Q99496 336 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 SSBP4Q9BWG4 385 aaPredicted RBP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 IFI27L2Q9H2X8 130 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 ZNF430Q9H8G1 570 aaPredicted RBP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 GNB4Q9HAV0 340 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 ELOVL5Q9NYP7 299 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 ZGRF1Q86YA3 2104 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 C10orf142B7Z368 130 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 HYPMO75409 117 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 GNG5P63218 68 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 RELBQ01201 579 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 ACTL10Q5JWF8 245 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 C1orf185Q5T7R7 199 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 FA2HQ7L5A8 372 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 TMEM144Q7Z5S9 345 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 WDR31Q8NA23 367 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 ST6GALNAC3Q8NDV1 305 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 SNRNP40Q96DI7 357 aaKnown RBP5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 BET1LQ9NYM9 111 aa5.67□□□□□ -1.5
SYNPO2-206ENST00000610556 NOTCH3Q9UM47 2321 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 COL6A3P12111 3177 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 EREGO14944 169 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 RPL27AP46776 148 aaKnown RBP5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 KRTAP27-1Q3LI81 207 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 COX19Q49B96 90 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 TIMM23BQ5SRD1 257 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 COL5A1-AS1Q5SY13 56 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 LEMD1Q68G75 181 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 FAM90A1Q86YD7 464 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 LINC00479Q96M42 142 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 C11orf1Q9H5F2 150 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 SCGB2A1O75556 95 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 IGKV1-16P04430 117 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 AMY1AP04745 511 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 TMEM177Q53S58 311 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 DUX4L9Q6RFH8 374 aaPredicted RBP5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 LINC00305Q7Z4B0 112 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 OR4F17Q8NGA8 305 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 OR4C5Q8NGB2 326 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 ST6GALNAC6Q969X2 333 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 NRN1Q9NPD7 142 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 S4R3C0 116 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 SPG11Q96JI7 2443 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 COL4A2P08572 1712 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 TECTAO75443 2155 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 DPRXA6NFQ7 191 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 UPK2O00526 184 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 ISLRO14498 428 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 SIAH2O43255 324 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 WISP2O76076 250 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 CD99P14209 185 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 MMDQ15546 238 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 ARSJQ5FYB0 599 aaPredicted RBP5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 SSX8Q7RTT4 187 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 C1orf162Q8NEQ5 155 aaPredicted RBP5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 OR4B1Q8NGF8 309 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 OR4C13Q8NGP0 309 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 RASL11BQ9BPW5 248 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 SFXN3Q9BWM7 321 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 HIF1ANQ9NWT6 349 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 HILPDAQ9Y5L2 63 aa5.66□□□□□ -1.5
SYNPO2-206ENST00000610556 CBY3A6NI87 242 aa5.65□□□□□ -1.5
SYNPO2-206ENST00000610556 A8MWP6 167 aa5.65□□□□□ -1.5
SYNPO2-206ENST00000610556 CD40P25942 277 aa5.65□□□□□ -1.5
SYNPO2-206ENST00000610556 MAS1LP35410 378 aa5.65□□□□□ -1.5
SYNPO2-206ENST00000610556 FOXL1Q12952 345 aa5.65□□□□□ -1.5
SYNPO2-206ENST00000610556 NEU1Q99519 415 aa5.65□□□□□ -1.5
SYNPO2-206ENST00000610556 WASHC3Q9Y3C0 194 aa5.65□□□□□ -1.5
SYNPO2-206ENST00000610556 NUP210LQ5VU65 1888 aa5.65□□□□□ -1.5
SYNPO2-206ENST00000610556 A8MWL6 223 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 CDX4O14627 284 aaPredicted RBP5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 IGLV2-14P01704 120 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 NPPCP23582 126 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 ARL3P36405 182 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 ZNF134P52741 427 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 PRRX1P54821 245 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 ERASQ7Z444 233 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 C1orf174Q8IYL3 243 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 RPRMLQ8N4K4 120 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 PRR7Q8TB68 274 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 GUCD1Q96NT3 240 aa5.65□□□□□ -1.51
SYNPO2-206ENST00000610556 OR8B2Q96RD0 313 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms