RNA–Protein interactions for RNA: ENST00000610470.4

PRKN-208, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene PRKN, Length 531 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-208ENST00000610470 MIXL1Q9H2W2 232 aa12.94□□□□□ -0.34
PRKN-208ENST00000610470 DNAH1Q9P2D7 4330 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 IGHV3OR16-8A0A075B7F1 116 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 OR4C46A6NHA9 309 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 GABARAPH6UMI1 98 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 YIF1AO95070 293 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 RAB3DO95716 219 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 IGKV1-5P01602 117 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 CD74P04233 296 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 APOC4P55056 127 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 MRPS10P82664 201 aaKnown RBP12.93□□□□□ -0.34
PRKN-208ENST00000610470 SSBP1Q04837 148 aaKnown RBP12.93□□□□□ -0.34
PRKN-208ENST00000610470 TRIM16LQ309B1 348 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 SCGB2B2Q4G0G5 96 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 SLC35G3Q8N808 338 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 PINX1Q96BK5 328 aaKnown RBP12.93□□□□□ -0.34
PRKN-208ENST00000610470 PDCD10Q9BUL8 212 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 CCDC59Q9P031 241 aaKnown RBP12.93□□□□□ -0.34
PRKN-208ENST00000610470 UBQLN2Q9UHD9 624 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 SMPXQ9UHP9 88 aa12.93□□□□□ -0.34
PRKN-208ENST00000610470 IGHV7-4-1A0A0J9YVY3 117 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 GNG7O60262 68 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 B3GALNT1O75752 331 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 IFNA17P01571 189 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 CTSDP07339 412 aaPredicted RBP12.92□□□□□ -0.34
PRKN-208ENST00000610470 SNCAP37840 140 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 IZUMO4Q1ZYL8 232 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 STEAP1BQ6NZ63 245 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 OR4D10Q8NGI6 311 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 OR10C1Q96KK4 312 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 OVOL2Q9BRP0 275 aa12.92□□□□□ -0.34
PRKN-208ENST00000610470 NXF2Q9GZY0 626 aaKnown RBP12.92□□□□□ -0.34
PRKN-208ENST00000610470 A0A0B4J293 547 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 INS-IGF2F8WCM5 200 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 P0C879 139 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 NPBWR1P48145 328 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 MEF2DQ14814 521 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 SPINK9Q5DT21 86 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 TMEM116Q8NCL8 245 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 DUSP18Q8NEJ0 188 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 OR13C8Q8NGS7 320 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 RRNAD1Q96FB5 475 aaKnown RBP12.91□□□□□ -0.34
PRKN-208ENST00000610470 RHPN1-AS1Q9BWJ2 59 aa12.91□□□□□ -0.34
PRKN-208ENST00000610470 TRAV14DV4A0A0A6YYC5 116 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 CORTO00230 105 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 UBE2CO00762 179 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 CHEK1O14757 476 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 ST8SIA3O43173 380 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 IGHV3-48P01763 117 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 UCP1P25874 307 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 SUB1P53999 127 aaKnown RBP eCLIP12.9□□□□□ -0.34
PRKN-208ENST00000610470 ODF3L2Q3SX64 289 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 SP6Q3SY56 376 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 RNASE11Q8TAA1 199 aaKnown RBP12.9□□□□□ -0.34
PRKN-208ENST00000610470 MARCH1Q8TCQ1 289 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 ZNF414Q96IQ9 312 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 RNF2Q99496 336 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 GINS3Q9BRX5 216 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 SLIRPQ9GZT3 109 aaKnown RBP12.9□□□□□ -0.34
PRKN-208ENST00000610470 C6orf62Q9GZU0 229 aaPredicted RBP12.9□□□□□ -0.34
PRKN-208ENST00000610470 RBM38Q9H0Z9 239 aaKnown RBP12.9□□□□□ -0.34
PRKN-208ENST00000610470 ENY2Q9NPA8 101 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 TP53TG1Q9Y2A0 90 aa12.9□□□□□ -0.34
PRKN-208ENST00000610470 JTBO76095 146 aa12.89□□□□□ -0.35
PRKN-208ENST00000610470 BMI1P35226 326 aa12.89□□□□□ -0.35
PRKN-208ENST00000610470 HOXA1P49639 335 aaPredicted RBP12.89□□□□□ -0.35
PRKN-208ENST00000610470 CMC4P56277 68 aaPredicted RBP12.89□□□□□ -0.35
PRKN-208ENST00000610470 Q6ZWC4 215 aa12.89□□□□□ -0.35
PRKN-208ENST00000610470 RABL2AQ9UBK7 228 aaPredicted RBP12.89□□□□□ -0.35
PRKN-208ENST00000610470 RSL24D1Q9UHA3 163 aaKnown RBP12.89□□□□□ -0.35
PRKN-208ENST00000610470 RABL2BQ9UNT1 228 aa12.89□□□□□ -0.35
PRKN-208ENST00000610470 C14orf166Q9Y224 244 aaKnown RBP12.89□□□□□ -0.35
PRKN-208ENST00000610470 KIR2DL5BA0A0G2JN68 375 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 KIR2DL5BA0A0G2JPC4 375 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 DISC1C4P0D8 188 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 ETV6P41212 452 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 KIR2DL5AQ8N109 375 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 STPG3Q8N7X2 389 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 KIR2DL5BQ8NHK3 375 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 MCFD2Q8NI22 146 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 SMIM4Q8WVI0 70 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 GALNT14Q96FL9 552 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 DIRAS2Q96HU8 199 aa12.88□□□□□ -0.35
PRKN-208ENST00000610470 PLECQ15149 4684 aaKnown RBP12.88□□□□□ -0.35
PRKN-208ENST00000610470 IGHV3-49A0A0A0MS15 119 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 CTDSPLO15194 276 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 SPRY2O43597 315 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 CD5P06127 495 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 IL18Q14116 193 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 SURF2Q15527 256 aaPredicted RBP12.87□□□□□ -0.35
PRKN-208ENST00000610470 PVRIGQ6DKI7 326 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 TOMM20LQ6UXN7 152 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 ZNF600Q6ZNG1 722 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 FAM219AQ8IW50 185 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 TMEM222Q9H0R3 208 aa12.87□□□□□ -0.35
PRKN-208ENST00000610470 TEX13DA0A0J9YY54 714 aaPredicted RBP12.86□□□□□ -0.35
PRKN-208ENST00000610470 SCGB2A1O75556 95 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 CDS2O95674 445 aa12.86□□□□□ -0.35
PRKN-208ENST00000610470 OR5AC1P0C628 307 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms