RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 SRPXP78539 464 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 RBMS2Q15434 407 aaKnown RBP12.69□□□□□ -0.38
SSBP4-213ENST00000602088 PVRIGQ6DKI7 326 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 SPSB3Q6PJ21 355 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 LYZL2Q7Z4W2 148 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 LGI3Q8N145 548 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 B9D2Q9BPU9 175 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 SHPKQ9UHJ6 478 aa12.69□□□□□ -0.38
SSBP4-213ENST00000602088 ZNF320A2RRD8 509 aa12.68□□□□□ -0.38
SSBP4-213ENST00000602088 RNASE2P10153 161 aaKnown RBP12.68□□□□□ -0.38
SSBP4-213ENST00000602088 IL7P13232 177 aa12.68□□□□□ -0.38
SSBP4-213ENST00000602088 FOLR2P14207 255 aa12.68□□□□□ -0.38
SSBP4-213ENST00000602088 EDN2P20800 178 aa12.68□□□□□ -0.38
SSBP4-213ENST00000602088 FCGR2BP31994 310 aaPredicted RBP12.68□□□□□ -0.38
SSBP4-213ENST00000602088 NMSQ5H8A3 153 aa12.68□□□□□ -0.38
SSBP4-213ENST00000602088 OR2K2Q8NGT1 345 aa12.68□□□□□ -0.38
SSBP4-213ENST00000602088 CHRDL1Q9BU40 450 aa12.68□□□□□ -0.38
SSBP4-213ENST00000602088 ENY2Q9NPA8 101 aa12.68□□□□□ -0.38
SSBP4-213ENST00000602088 IGHV3-35A0A0C4DH35 117 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 LINC00854A0A1B0GVQ3 168 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 TMEM213A2RRL7 107 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 IZUMO1RA6ND01 250 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 MT-CO2P00403 227 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 CTSGP08311 255 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 SULT1A3P0DMM9 295 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 SULT1A4P0DMN0 295 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 CBLN1P23435 193 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 ADMP35318 185 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 SUB1P53999 127 aaKnown RBP eCLIP12.67□□□□□ -0.38
SSBP4-213ENST00000602088 MFAP4P55083 255 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 BSXQ3C1V8 233 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 Q56UQ5 140 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 LCN12Q6JVE5 192 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 UNQ9165/PRO28630Q6UXU0 137 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 LINC00299Q6ZSB3 139 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 CENPSQ8N2Z9 138 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 UBAC2Q8NBM4 344 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 PINX1Q96BK5 328 aaKnown RBP12.67□□□□□ -0.38
SSBP4-213ENST00000602088 TXN2Q99757 166 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 C7orf50Q9BRJ6 194 aaKnown RBP12.67□□□□□ -0.38
SSBP4-213ENST00000602088 ZNF436Q9C0F3 470 aaPredicted RBP12.67□□□□□ -0.38
SSBP4-213ENST00000602088 GAR1Q9NY12 217 aaKnown RBP12.67□□□□□ -0.38
SSBP4-213ENST00000602088 SMAD5-AS1Q9Y6J3 95 aa12.67□□□□□ -0.38
SSBP4-213ENST00000602088 PIGBOS1A0A0B4J2F0 54 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 CENPXA8MT69 81 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 NDUFB6O95139 128 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 IGHV3-48P01763 117 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 VAMP1P23763 118 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 CD69Q07108 199 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 PPP1R1AQ13522 171 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 DEFB114Q30KQ6 69 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 CNPY1Q3B7I2 92 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 ANKRD55Q3KP44 614 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 TM4SF20Q53R12 229 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 Q8N1Y9 231 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 LRTM2Q8N967 370 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 CACNG8Q8WXS5 425 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 PALMDQ9NP74 551 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 TECRQ9NZ01 308 aaKnown RBP12.66□□□□□ -0.38
SSBP4-213ENST00000602088 CACFD1Q9UGQ2 172 aa12.66□□□□□ -0.38
SSBP4-213ENST00000602088 DUXBA0A1W2PPF3 345 aa12.65□□□□□ -0.38
SSBP4-213ENST00000602088 NDUFA4O00483 81 aa12.65□□□□□ -0.38
SSBP4-213ENST00000602088 SFT2D2O95562 160 aa12.65□□□□□ -0.38
SSBP4-213ENST00000602088 BTCP35070 178 aa12.65□□□□□ -0.38
SSBP4-213ENST00000602088 ELLP55199 621 aaPredicted RBP12.65□□□□□ -0.38
SSBP4-213ENST00000602088 SMCO1Q147U7 214 aa12.65□□□□□ -0.38
SSBP4-213ENST00000602088 CD300EQ496F6 205 aaPredicted RBP12.65□□□□□ -0.38
SSBP4-213ENST00000602088 DYNLRB2Q8TF09 96 aa12.65□□□□□ -0.38
SSBP4-213ENST00000602088 HEYLQ9NQ87 328 aaPredicted RBP12.65□□□□□ -0.38
SSBP4-213ENST00000602088 UFC1Q9Y3C8 167 aa12.65□□□□□ -0.38
SSBP4-213ENST00000602088 DNAH9Q9NYC9 4486 aa12.65□□□□□ -0.38
SSBP4-213ENST00000602088 A0A1B0GU03 582 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 CEBPZOSA8MTT3 80 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 C8orf88P0DMB2 117 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 HTR2BP41595 481 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 UBE2MP61081 183 aaKnown RBP12.64□□□□□ -0.39
SSBP4-213ENST00000602088 TNFRSF9Q07011 255 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 UXS1Q8NBZ7 420 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 TMEM190Q8WZ59 177 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 MARC2Q969Z3 335 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 ZNF414Q96IQ9 312 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 HSPB7Q9UBY9 170 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 FLVCR2Q9UPI3 526 aa12.64□□□□□ -0.39
SSBP4-213ENST00000602088 ZNF785A8K8V0 405 aa12.63□□□□□ -0.39
SSBP4-213ENST00000602088 CORTO00230 105 aa12.63□□□□□ -0.39
SSBP4-213ENST00000602088 PLA2G10O15496 165 aa12.63□□□□□ -0.39
SSBP4-213ENST00000602088 NUPL2O15504 423 aaKnown RBP12.63□□□□□ -0.39
SSBP4-213ENST00000602088 NXPH3O95157 252 aa12.63□□□□□ -0.39
SSBP4-213ENST00000602088 DUSP18Q8NEJ0 188 aa12.63□□□□□ -0.39
SSBP4-213ENST00000602088 FNDC4Q9H6D8 234 aaPredicted RBP12.63□□□□□ -0.39
SSBP4-213ENST00000602088 MRPL27Q9P0M9 148 aaKnown RBP12.63□□□□□ -0.39
SSBP4-213ENST00000602088 MLXQ9UH92 298 aa12.63□□□□□ -0.39
SSBP4-213ENST00000602088 C9orf170A2RU37 121 aa12.62□□□□□ -0.39
SSBP4-213ENST00000602088 GNG7O60262 68 aa12.62□□□□□ -0.39
SSBP4-213ENST00000602088 NPBWR1P48145 328 aa12.62□□□□□ -0.39
SSBP4-213ENST00000602088 RELQ04864 619 aaPredicted RBP12.62□□□□□ -0.39
SSBP4-213ENST00000602088 C2orf83Q53S99 150 aa12.62□□□□□ -0.39
SSBP4-213ENST00000602088 HIPK2Q9H2X6 1198 aa12.62□□□□□ -0.39
SSBP4-213ENST00000602088 DAZ1Q9NQZ3 744 aaKnown RBP12.62□□□□□ -0.39
SSBP4-213ENST00000602088 TMED3Q9Y3Q3 217 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms