RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 NPIPB5A8MRT5 1133 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 MPC2O95563 127 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 IGHV4-30-4P0DP06 118 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 LYL1P12980 280 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 PSMB6P28072 239 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 S100A11P31949 105 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 MAS1LP35410 378 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 CATR1Q13166 79 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 IL15RAQ13261 267 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 CCDC71LQ8N9Z2 235 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 FAM210AQ96ND0 272 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 PDCD10Q9BUL8 212 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 NAA60Q9H7X0 242 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 BET1LQ9NYM9 111 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 COMMD9Q9P000 198 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 TNFSF18Q9UNG2 199 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 DMRT1Q9Y5R6 373 aa10.45□□□□□ -0.74
SCAF1-203ENST00000598359 FXYD6-FXYD2A0A087WZ82 144 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 UPK2O00526 184 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 RBFOX2O43251 390 aaKnown RBP eCLIP10.44□□□□□ -0.74
SCAF1-203ENST00000598359 OR2C1O95371 312 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 HPRT1P00492 218 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 CTRB1P17538 263 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 OR2B8PP59922 312 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 CTRB2Q6GPI1 263 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 CLEC19AQ6UXS0 136 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 ZNF680Q8NEM1 530 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 DMBX1Q8NFW5 382 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 PPP1R1CQ8WVI7 109 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 CCDC140Q96MF4 163 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 RCHY1Q96PM5 261 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 TMEM140Q9NV12 185 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 TENM2Q9NT68 2774 aa10.44□□□□□ -0.74
SCAF1-203ENST00000598359 A0A0D9SG52 128 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 ARPC5O15511 151 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 PGLYRP1O75594 196 aaPredicted RBP10.43□□□□□ -0.74
SCAF1-203ENST00000598359 CRYGCP07315 174 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 NQO2P16083 231 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 PIGPP57054 158 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 OR2F1Q13607 317 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 TMEM187Q14656 261 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 TMUB2Q71RG4 321 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 KCNRGQ8N5I3 272 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 OR10W1Q8NGF6 305 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 OR4A5Q8NH83 315 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 C2orf50Q96LR7 162 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 ZC4H2Q9NQZ6 224 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 KCNIP3Q9Y2W7 256 aa10.43□□□□□ -0.74
SCAF1-203ENST00000598359 TEX13DA0A0J9YY54 714 aaPredicted RBP10.42□□□□□ -0.74
SCAF1-203ENST00000598359 IGLC7A0M8Q6 106 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 RNF222A6NCQ9 220 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 MFSD2BA6NFX1 497 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 H0Y980 276 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 ADAP1O75689 374 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 IFNA7P01567 189 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 DEFA4P12838 97 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 LPAR6P43657 344 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 POU2AF1Q16633 256 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 PHLDA2Q53GA4 152 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 CACNG8Q8WXS5 425 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 AIFM2Q9BRQ8 373 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 MFFQ9GZY8 342 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 PLEKHA2Q9HB19 425 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 C19orf73Q9NVV2 129 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 PEMTQ9UBM1 199 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 NSG2Q9Y328 171 aa10.42□□□□□ -0.74
SCAF1-203ENST00000598359 IGLV11-55A0A075B6I3 123 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 C5orf51A6NDU8 294 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 GPR31O00270 319 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 TSC22D2O75157 780 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 GGCTO75223 188 aaKnown RBP10.41□□□□□ -0.74
SCAF1-203ENST00000598359 B3GALNT1O75752 331 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 KRASP01116 189 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 S100A1P23297 94 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 F2RP25116 425 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 G6PCP35575 357 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 ARL3P36405 182 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 HTR2BP41595 481 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 SRPXP78539 464 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 CD300EQ496F6 205 aaPredicted RBP10.41□□□□□ -0.74
SCAF1-203ENST00000598359 ZNF585BQ52M93 769 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 LCN12Q6JVE5 192 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 PRSS54Q6PEW0 395 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 ZNF546Q86UE3 836 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 THAP6Q8TBB0 222 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 CD300LFQ8TDQ1 290 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 EEF1AKMT3Q96AZ1 226 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 SEC22AQ96IW7 307 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 HINT2Q9BX68 163 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 COMMD5Q9GZQ3 224 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 SIGLEC8Q9NYZ4 499 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 UBQLN2Q9UHD9 624 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 DNAH7Q8WXX0 4024 aa10.41□□□□□ -0.74
SCAF1-203ENST00000598359 IGHV3-35A0A0C4DH35 117 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 TEX50A0A1B0GTY4 177 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 RPS10-NUDT3A0A1W2PQS6 291 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 C2orf70A6NJV1 201 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 MARCH11A6NNE9 402 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 FAM25EA8MYX2 175 aa10.4□□□□□ -0.74
SCAF1-203ENST00000598359 OR5AC1P0C628 307 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms