RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 LPCAT3Q6P1A2 487 aa7.74□□□□□ -1.17
CHMP2A-202ENST00000596708 C11orf68Q9H3H3 251 aaKnown RBP7.74□□□□□ -1.17
CHMP2A-202ENST00000596708 TMEM14BQ9NUH8 114 aa7.74□□□□□ -1.17
CHMP2A-202ENST00000596708 IGHV3-66A0A0C4DH42 116 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 CD5P06127 495 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 NAT1P18440 290 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 HLA-DMAP28067 261 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 PRSS3P35030 304 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 HRH1P35367 487 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 DEFB131AP59861 70 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 LEMD1Q68G75 181 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 TOMM20LQ6UXN7 152 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 TBC1D26Q86UD7 250 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 CROCCP3Q8IVE0 287 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 SAMD12Q8N8I0 201 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 DUSP18Q8NEJ0 188 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 ST8SIA2Q92186 375 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 ZNF414Q96IQ9 312 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 SEC22AQ96IW7 307 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 ANAPC10Q9UM13 185 aa7.73□□□□□ -1.17
CHMP2A-202ENST00000596708 DNAH10Q8IVF4 4471 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 IGLL5B9A064 214 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 DFFBO76075 338 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 APOHP02749 345 aaPredicted RBP7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 TGFBR1P36897 503 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 NPBWR1P48145 328 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 TCTAP57738 103 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 HSPE1P61604 102 aaKnown RBP7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 PRR20EP86478 221 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 PRR20CP86479 221 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 PRR20DP86480 221 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 PRR20BP86481 221 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 PRR20AP86496 221 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 PRCDQ00LT1 54 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 SPINK9Q5DT21 86 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 LYSMD2Q8IV50 215 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 STHQ8IWL8 128 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 LILRB2Q8N423 598 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 ZNF114Q8NC26 417 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 MS4A6AQ9H2W1 248 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 FAM212BQ9NTI7 297 aaPredicted RBP7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 RABAC1Q9UI14 185 aa7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 PUS1Q9Y606 427 aaKnown RBP eCLIP7.72□□□□□ -1.17
CHMP2A-202ENST00000596708 SNCAP37840 140 aa7.71□□□□□ -1.18
CHMP2A-202ENST00000596708 RPS19P39019 145 aaKnown RBP7.71□□□□□ -1.18
CHMP2A-202ENST00000596708 ZNF600Q6ZNG1 722 aa7.71□□□□□ -1.18
CHMP2A-202ENST00000596708 MRGPRFQ96AM1 343 aa7.71□□□□□ -1.18
CHMP2A-202ENST00000596708 TMEM231Q9H6L2 316 aa7.71□□□□□ -1.18
CHMP2A-202ENST00000596708 VSIRQ9H7M9 311 aa7.71□□□□□ -1.18
CHMP2A-202ENST00000596708 MUC4Q99102 2169 aa7.71□□□□□ -1.18
CHMP2A-202ENST00000596708 SMIM31A0A1B0GVY4 71 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 A0A1W2PS18 150 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 C11orf94C9JXX5 98 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 ATP6V1G2O95670 118 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 TMEM50AO95807 157 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 IGKV1-39P01597 117 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 IGKV1D-39P04432 117 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 NPPCP23582 126 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 LSM3P62310 102 aaKnown RBP7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 IZUMO4Q1ZYL8 232 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 CENPSQ8N2Z9 138 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 FAM24BQ8N5W8 94 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 SLC35G3Q8N808 338 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 APLNQ9ULZ1 77 aa7.7□□□□□ -1.18
CHMP2A-202ENST00000596708 TRAV2A0A0B4J234 112 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 IFNA17P01571 189 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 PGAM2P15259 253 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 SUB1P53999 127 aaKnown RBP eCLIP7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 SNX29P2Q8IUI4 249 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 STXBP6Q8NFX7 210 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 GPX8Q8TED1 209 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 TMEM230Q96A57 120 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 PDCD10Q9BUL8 212 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 ZFAND3Q9H8U3 227 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 ENY2Q9NPA8 101 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 COMMD3Q9UBI1 195 aa7.69□□□□□ -1.18
CHMP2A-202ENST00000596708 HERC2O95714 4834 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 HECTD4Q9Y4D8 3996 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 IGHV4-28A0A0C4DH34 117 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 A0A1B0GU03 582 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 CORTO00230 105 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 HLA-DMBP28068 263 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 AKR1C2P52895 323 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 PPP5CP53041 499 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 UCP3P55916 312 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 TMEM41BQ5BJD5 291 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 MORN3Q6PF18 240 aaPredicted RBP7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 Q8NAQ8 132 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 NARS2Q96I59 477 aaKnown RBP7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 METTL26Q96S19 204 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 HRH4Q9H3N8 390 aa7.68□□□□□ -1.18
CHMP2A-202ENST00000596708 TRAV10A0A0B4J240 114 aa7.67□□□□□ -1.18
CHMP2A-202ENST00000596708 KNCNA6PVL3 124 aa7.67□□□□□ -1.18
CHMP2A-202ENST00000596708 K7EQG2 157 aa7.67□□□□□ -1.18
CHMP2A-202ENST00000596708 CLN5O75503 358 aa7.67□□□□□ -1.18
CHMP2A-202ENST00000596708 SCGB2A1O75556 95 aa7.67□□□□□ -1.18
CHMP2A-202ENST00000596708 ATG12O94817 140 aa7.67□□□□□ -1.18
CHMP2A-202ENST00000596708 ZNF688P0C7X2 276 aa7.67□□□□□ -1.18
CHMP2A-202ENST00000596708 RBMY1A1P0DJD3 496 aaKnown RBP7.67□□□□□ -1.18
CHMP2A-202ENST00000596708 RBMY1CP0DJD4 496 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 159.2 ms