RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 SLC35G3Q8N808 338 aa13.27□□□□□ -0.29
SHKBP1-203ENST00000594298 VN1R17PQ8TDU5 208 aa13.27□□□□□ -0.29
SHKBP1-203ENST00000594298 TMEM230Q96A57 120 aa13.27□□□□□ -0.29
SHKBP1-203ENST00000594298 ENY2Q9NPA8 101 aa13.27□□□□□ -0.29
SHKBP1-203ENST00000594298 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.27□□□□□ -0.29
SHKBP1-203ENST00000594298 IZUMO1RA6ND01 250 aa13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 GGCTO75223 188 aaKnown RBP13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 IZUMO4Q1ZYL8 232 aa13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 CNPY1Q3B7I2 92 aa13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 LGI3Q8N145 548 aa13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 OR2C3Q8N628 320 aa13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 OR1P1Q8NH06 330 aa13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 IL17DQ8TAD2 202 aa13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 S100ZQ8WXG8 99 aa13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 HIPK2Q9H2X6 1198 aa13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 HYDINQ4G0P3 5121 aa13.26□□□□□ -0.29
SHKBP1-203ENST00000594298 BMPR1BO00238 502 aa13.25□□□□□ -0.29
SHKBP1-203ENST00000594298 ST8SIA3O43173 380 aa13.25□□□□□ -0.29
SHKBP1-203ENST00000594298 IL7P13232 177 aa13.25□□□□□ -0.29
SHKBP1-203ENST00000594298 SNCAP37840 140 aa13.25□□□□□ -0.29
SHKBP1-203ENST00000594298 CLEC19AQ6UXS0 136 aa13.25□□□□□ -0.29
SHKBP1-203ENST00000594298 LHFPL5Q8TAF8 219 aa13.25□□□□□ -0.29
SHKBP1-203ENST00000594298 ATP6V0BQ99437 205 aa13.25□□□□□ -0.29
SHKBP1-203ENST00000594298 SDHCQ99643 169 aaPredicted RBP13.25□□□□□ -0.29
SHKBP1-203ENST00000594298 A0A0B4J2A0 478 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 INS-IGF2F8WCM5 200 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 JTBO76095 146 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 CLEC3BP05452 202 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 ARL3P36405 182 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 SUB1P53999 127 aaKnown RBP eCLIP13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 SPCS3P61009 180 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 FAM106AQ4KMX7 169 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 CENPSQ8N2Z9 138 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 ZNF114Q8NC26 417 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 OR52E5Q8NH55 327 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 SHPKQ9UHJ6 478 aa13.24□□□□□ -0.29
SHKBP1-203ENST00000594298 A0A0G2JRQ6 117 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 LINC00854A0A1B0GVQ3 168 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 IGHV3-23P01764 117 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 VAMP1P23763 118 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 HOXA1P49639 335 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 CD81P60033 236 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 UBE2MP61081 183 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 SUPT4H1P63272 117 aaKnown RBP13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 CD300EQ496F6 205 aaPredicted RBP13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 ZNF502Q8TBZ5 544 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 GPR146Q96CH1 333 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 NEURL2Q9BR09 285 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 CCDC32Q9BV29 185 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 CACNG5Q9UF02 275 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 DMRT1Q9Y5R6 373 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 S4R3C0 116 aa13.23□□□□□ -0.29
SHKBP1-203ENST00000594298 DUXBA0A1W2PPF3 345 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 MFSD2BA6NFX1 497 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 PPP5D1E7EU14 171 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 NDUFB6O95139 128 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 OR2C1O95371 312 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 SULT1A3P0DMM9 295 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 SULT1A4P0DMN0 295 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 CCR6P51684 374 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 AARDQ4LEZ3 155 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 PLET1Q6UQ28 207 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 Q6ZRM9 215 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 GPHB5Q86YW7 130 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 CCDC140Q96MF4 163 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 RETNQ9HD89 108 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 PTTG2Q9NZH5 202 aa13.22□□□□□ -0.29
SHKBP1-203ENST00000594298 ZNF785A8K8V0 405 aa13.21□□□□□ -0.29
SHKBP1-203ENST00000594298 MFAP2P55001 183 aa13.21□□□□□ -0.29
SHKBP1-203ENST00000594298 SPINK9Q5DT21 86 aa13.21□□□□□ -0.29
SHKBP1-203ENST00000594298 MISP3Q96FF7 219 aa13.21□□□□□ -0.29
SHKBP1-203ENST00000594298 ZC4H2Q9NQZ6 224 aa13.21□□□□□ -0.29
SHKBP1-203ENST00000594298 C21orf62Q9NYP8 219 aa13.21□□□□□ -0.29
SHKBP1-203ENST00000594298 RBMY1BA6NDE4 496 aaKnown RBP13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 RBMY1EA6NEQ0 496 aaKnown RBP13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 LGALS9O00182 355 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 CORTO00230 105 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 SFT2D2O95562 160 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 CD7P09564 240 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 RBMY1DP0C7P1 496 aaKnown RBP13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 GPR183P32249 361 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 DEFB114Q30KQ6 69 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 SPSB3Q6PJ21 355 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 LYZL2Q7Z4W2 148 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 LRTM2Q8N967 370 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 SCARB1Q8WTV0 552 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 BSCL2Q96G97 398 aaPredicted RBP13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 TXN2Q99757 166 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 PRR13Q9NZ81 148 aa13.2□□□□□ -0.3
SHKBP1-203ENST00000594298 A0A1B0GU03 582 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 CEBPZOSA8MTT3 80 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 K7EIM0 57 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 TGOLN2O43493 480 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 HLA-AP01891 365 aaKnown RBP13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 MFAP4P55083 255 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 PPP1R1AQ13522 171 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 SMCO1Q147U7 214 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 Q56UQ5 140 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 NMSQ5H8A3 153 aa13.19□□□□□ -0.3
SHKBP1-203ENST00000594298 DEFB125Q8N687 156 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms