RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, human

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CIRBP-227	ENST00000590188	ZNF436	Q9C0F3	470 aa	Predicted RBP	13.58	□□□□□ -0.24
CIRBP-227	ENST00000590188	SLC2A8	Q9NY64	477 aa		13.58	□□□□□ -0.24
CIRBP-227	ENST00000590188	SCP2D1	Q9UJQ7	156 aa		13.58	□□□□□ -0.24
CIRBP-227	ENST00000590188	UFC1	Q9Y3C8	167 aa		13.58	□□□□□ -0.24
CIRBP-227	ENST00000590188	CRYM-AS1	A6NIL9	109 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188		I3L2K1	104 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188	S100A5	P33763	92 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188	ADM	P35318	185 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188	TMEM268	Q5VZI3	342 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188		Q6ZRM9	215 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188	SELENOH	Q8IZQ5	122 aa	Known RBP	13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188	DEFB125	Q8N687	156 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188	ZNF114	Q8NC26	417 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188	TMEM190	Q8WZ59	177 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188	ZMAT4	Q9H898	229 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188		V9GYH0	126 aa		13.57	□□□□□ -0.24
CIRBP-227	ENST00000590188	B3GALNT1	O75752	331 aa		13.56	□□□□□ -0.24
CIRBP-227	ENST00000590188	NXPH3	O95157	252 aa		13.56	□□□□□ -0.24
CIRBP-227	ENST00000590188	CDS2	O95674	445 aa		13.56	□□□□□ -0.24
CIRBP-227	ENST00000590188	SNCA	P37840	140 aa		13.56	□□□□□ -0.24
CIRBP-227	ENST00000590188	MFAP4	P55083	255 aa		13.56	□□□□□ -0.24
CIRBP-227	ENST00000590188	DHODH	Q02127	395 aa		13.56	□□□□□ -0.24
CIRBP-227	ENST00000590188	SPSB3	Q6PJ21	355 aa		13.56	□□□□□ -0.24
CIRBP-227	ENST00000590188	RBPMS	Q93062	196 aa	Known RBP	13.56	□□□□□ -0.24
CIRBP-227	ENST00000590188	TMEM230	Q96A57	120 aa		13.56	□□□□□ -0.24
CIRBP-227	ENST00000590188	ENY2	Q9NPA8	101 aa		13.56	□□□□□ -0.24
CIRBP-227	ENST00000590188		A8MZ25	164 aa		13.55	□□□□□ -0.24
CIRBP-227	ENST00000590188	AKR1C4	P17516	323 aa		13.55	□□□□□ -0.24
CIRBP-227	ENST00000590188	ZNF79	Q15937	498 aa		13.55	□□□□□ -0.24
CIRBP-227	ENST00000590188	TRIM63	Q969Q1	353 aa		13.55	□□□□□ -0.24
CIRBP-227	ENST00000590188	GPR146	Q96CH1	333 aa		13.55	□□□□□ -0.24
CIRBP-227	ENST00000590188	MRPL27	Q9P0M9	148 aa	Known RBP	13.55	□□□□□ -0.24
CIRBP-227	ENST00000590188	CACNG5	Q9UF02	275 aa		13.55	□□□□□ -0.24
CIRBP-227	ENST00000590188	NDUFA4	O00483	81 aa		13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	NUPL2	O15504	423 aa	Known RBP	13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	YIF1A	O95070	293 aa		13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	CTSG	P08311	255 aa		13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	C8orf88	P0DMB2	117 aa		13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	KLF9	Q13886	244 aa	Predicted RBP	13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	HAGH	Q16775	308 aa		13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	RBPMS2	Q6ZRY4	209 aa	Known RBP	13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	TOMM5	Q8N4H5	51 aa		13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	MARC2	Q969Z3	335 aa		13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	TM2D3	Q9BRN9	247 aa		13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	SRD5A3	Q9H8P0	318 aa		13.54	□□□□□ -0.24
CIRBP-227	ENST00000590188	IGHV3-49	A0A0A0MS15	119 aa		13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	OR11H12	B2RN74	326 aa		13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	GNG7	O60262	68 aa		13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	RNASE2	P10153	161 aa	Known RBP	13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	ELL	P55199	621 aa	Predicted RBP	13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	TMEM187	Q14656	261 aa		13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	CCDC190	Q86UF4	302 aa		13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	FAM219A	Q8IW50	185 aa		13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	OR52B4	Q8NGK2	314 aa		13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	ZNF414	Q96IQ9	312 aa		13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	SCGB3A2	Q96PL1	93 aa		13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	DAZ1	Q9NQZ3	744 aa	Known RBP	13.53	□□□□□ -0.24
CIRBP-227	ENST00000590188	FAU	P35544	74 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-227	ENST00000590188	SLC16A13	Q7RTY0	426 aa		13.52	□□□□□ -0.25
CIRBP-227	ENST00000590188	TMED4	Q7Z7H5	227 aa		13.52	□□□□□ -0.25
CIRBP-227	ENST00000590188	ATP6V0B	Q99437	205 aa		13.52	□□□□□ -0.25
CIRBP-227	ENST00000590188	RETN	Q9HD89	108 aa		13.52	□□□□□ -0.25
CIRBP-227	ENST00000590188	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	13.52	□□□□□ -0.25
CIRBP-227	ENST00000590188	GAR1	Q9NY12	217 aa	Known RBP	13.52	□□□□□ -0.25
CIRBP-227	ENST00000590188	KCNIP3	Q9Y2W7	256 aa		13.52	□□□□□ -0.25
CIRBP-227	ENST00000590188	CEBPZOS	A8MTT3	80 aa		13.51	□□□□□ -0.25
CIRBP-227	ENST00000590188	SUB1	P53999	127 aa	Known RBP eCLIP	13.51	□□□□□ -0.25	7e-8	■□□□□ 9.3
CIRBP-227	ENST00000590188	AP3S2	P59780	193 aa		13.51	□□□□□ -0.25
CIRBP-227	ENST00000590188	SPCS3	P61009	180 aa		13.51	□□□□□ -0.25
CIRBP-227	ENST00000590188	REL	Q04864	619 aa	Predicted RBP	13.51	□□□□□ -0.25
CIRBP-227	ENST00000590188	MLANA	Q16655	118 aa		13.51	□□□□□ -0.25
CIRBP-227	ENST00000590188	TXN2	Q99757	166 aa		13.51	□□□□□ -0.25
CIRBP-227	ENST00000590188	TMEM56-RWDD3	S4R434	201 aa		13.51	□□□□□ -0.25
CIRBP-227	ENST00000590188	IGHV3OR16-13	A0A075B7E8	117 aa		13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	IGHV3-74	A0A0B4J1X5	117 aa		13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	RBMY1B	A6NDE4	496 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	RBMY1E	A6NEQ0	496 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	INS-IGF2	F8WCM5	200 aa		13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	RBMY1D	P0C7P1	496 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	OPRK1	P41145	380 aa		13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	SUPT4H1	P63272	117 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	DUSP18	Q8NEJ0	188 aa		13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	GALNT14	Q96FL9	552 aa		13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	SPATA25	Q9BR10	227 aa		13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	HEYL	Q9NQ87	328 aa	Predicted RBP	13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	MRPL36	Q9P0J6	103 aa	Known RBP	13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	UBQLN2	Q9UHD9	624 aa		13.5	□□□□□ -0.25
CIRBP-227	ENST00000590188	KMT2C	Q8NEZ4	4911 aa	Known RBP	13.49	□□□□□ -0.25
CIRBP-227	ENST00000590188	ZNF701	M0R085	212 aa	Predicted RBP	13.49	□□□□□ -0.25
CIRBP-227	ENST00000590188	FCGR2B	P31994	310 aa	Predicted RBP	13.49	□□□□□ -0.25
CIRBP-227	ENST00000590188	NPBWR1	P48145	328 aa		13.49	□□□□□ -0.25
CIRBP-227	ENST00000590188	SPANXN2	Q5MJ10	180 aa		13.49	□□□□□ -0.25
CIRBP-227	ENST00000590188	LYZL2	Q7Z4W2	148 aa		13.49	□□□□□ -0.25
CIRBP-227	ENST00000590188	FAM110A	Q9BQ89	295 aa		13.49	□□□□□ -0.25
CIRBP-227	ENST00000590188	FNDC4	Q9H6D8	234 aa	Predicted RBP	13.49	□□□□□ -0.25
CIRBP-227	ENST00000590188	TRAV25	A0A0B4J276	109 aa		13.48	□□□□□ -0.25
CIRBP-227	ENST00000590188	C15orf62	A8K5M9	175 aa		13.48	□□□□□ -0.25
CIRBP-227	ENST00000590188		K7EMT4	169 aa		13.48	□□□□□ -0.25
CIRBP-227	ENST00000590188	CORT	O00230	105 aa		13.48	□□□□□ -0.25
CIRBP-227	ENST00000590188	SULT1A3	P0DMM9	295 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms