RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 NPBQ8NG41 125 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 OR1P1Q8NH06 330 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 MRPL32Q9BYC8 188 aaKnown RBP8.36□□□□□ -1.07
VPS25-203ENST00000589520 METTL1Q9UBP6 276 aaKnown RBP8.36□□□□□ -1.07
VPS25-203ENST00000589520 PUS1Q9Y606 427 aaKnown RBP eCLIP8.36□□□□□ -1.07
VPS25-203ENST00000589520 LRBAP50851 2863 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 SETD2Q9BYW2 2564 aaPredicted RBP8.36□□□□□ -1.07
VPS25-203ENST00000589520 ANKHD1Q8IWZ3 2542 aaKnown RBP8.36□□□□□ -1.07
VPS25-203ENST00000589520 ITPR2Q14571 2701 aa8.36□□□□□ -1.07
VPS25-203ENST00000589520 ROS1P08922 2347 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 A0A1W2PPI3 338 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 NUPL2O15504 423 aaKnown RBP8.35□□□□□ -1.07
VPS25-203ENST00000589520 LY6HO94772 140 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 MOSP00540 346 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 MYOD1P15172 320 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 ATF4P18848 351 aaPredicted RBP8.35□□□□□ -1.07
VPS25-203ENST00000589520 WT1-ASQ06250 92 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 FAM90A2PQ658T7 463 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 OR10W1Q8NGF6 305 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 OR1L4Q8NGR5 311 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 OR2T10Q8NGZ9 312 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 GATAD1Q8WUU5 269 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 IGFBPL1Q8WX77 278 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 MALSU1Q96EH3 234 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 C1orf159Q96HA4 380 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 PFDN5Q99471 154 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 CTDSP1Q9GZU7 261 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 LPAR2Q9HBW0 351 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 TMEM167BQ9NRX6 74 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 TECRQ9NZ01 308 aaKnown RBP8.35□□□□□ -1.07
VPS25-203ENST00000589520 NAT8Q9UHE5 227 aa8.35□□□□□ -1.07
VPS25-203ENST00000589520 PKDREJQ9NTG1 2253 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 IGHV3-72A0A0B4J1Y9 119 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 IGHV2-70DA0A0C4DH43 119 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 ZNF727A8MUV8 499 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 NBR2O15453 112 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 NDUFA3O95167 84 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 VENTXO95231 258 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 CRYGCP07315 174 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 LINC00869P0C866 280 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 FOLR2P14207 255 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 UBE2E1P51965 193 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 CD81P60033 236 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 FLI1Q01543 452 aaPredicted RBP8.34□□□□□ -1.07
VPS25-203ENST00000589520 EBI3Q14213 229 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 TNXAQ16473 311 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 TMEM241Q24JQ0 296 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 MRGPRG-AS1Q2M3A8 158 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 TMEM88Q6PEY1 159 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 PQLC2Q6ZP29 291 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 CYP2G1PQ6ZSU1 146 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 VMO1Q7Z5L0 202 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 THAP8Q8NA92 274 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 SIRPDQ9H106 197 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 SDF2L1Q9HCN8 221 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 FUT9Q9Y231 359 aa8.34□□□□□ -1.07
VPS25-203ENST00000589520 USP9YO00507 2555 aaPredicted RBP8.34□□□□□ -1.07
VPS25-203ENST00000589520 MALRD1Q5VYJ5 2156 aa8.34□□□□□ -1.08
VPS25-203ENST00000589520 TCRBV4S1A1TA0A5B7 111 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 IGLC7A0M8Q6 106 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 CGB1A6NKQ9 187 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 COLCA2A8K830 154 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 TIMM23O14925 209 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 PAGE4O60829 102 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 OR5G3P0C626 314 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 AREGP15514 252 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 OR10J1P30954 320 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 CEBPGP53567 150 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 DSCR9P59020 149 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 BPIFB3P59826 476 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 LMO4P61968 165 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 PLGLAQ15195 96 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 HCP5Q6MZN7 132 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 SPNS3Q6ZMD2 512 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 CBLN2Q8IUK8 224 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 OR4F5Q8NH21 305 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 SSMEM1Q8WWF3 244 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 TMEM190Q8WZ59 177 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 CFHR4Q92496 578 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 RITA1Q96K30 269 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 OR4F4Q96R69 305 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 PIMREGQ9BSJ6 248 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 C1RLQ9NZP8 487 aa8.33□□□□□ -1.08
VPS25-203ENST00000589520 DIDO1Q9BTC0 2240 aaKnown RBP8.32□□□□□ -1.08
VPS25-203ENST00000589520 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
VPS25-203ENST00000589520 LOC105371267A0A1B0GV96 52 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 C11orf94C9JXX5 98 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 E7EUB6 86 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 TGOLN2O43493 480 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 TOX4O94842 621 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 OR2C1O95371 312 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 FABP1P07148 127 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 FAM106CPP0CH98 169 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 GCHFRP30047 84 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 BRS3P32247 399 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 MMDQ15546 238 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 FAM78BQ5VT40 261 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 HIST2H2BCQ6DN03 193 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 IQCF2Q8IXL9 164 aa8.32□□□□□ -1.08
VPS25-203ENST00000589520 TMEM116Q8NCL8 245 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms