RNA–Protein interactions for RNA: ENST00000589351.5

DNMT1-220, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 672 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-220ENST00000589351 CMSS1Q9BQ75 279 aaKnown RBP4.17□□□□□ -1.74
DNMT1-220ENST00000589351 GGTLC1Q9BX51 225 aa4.17□□□□□ -1.74
DNMT1-220ENST00000589351 TM2D1Q9BX74 207 aa4.17□□□□□ -1.74
DNMT1-220ENST00000589351 C12orf4Q9NQ89 552 aa4.17□□□□□ -1.74
DNMT1-220ENST00000589351 OR1A1Q9P1Q5 309 aa4.17□□□□□ -1.74
DNMT1-220ENST00000589351 CLEC2DQ9UHP7 191 aa4.17□□□□□ -1.74
DNMT1-220ENST00000589351 EPPK1P58107 5090 aaKnown RBP4.17□□□□□ -1.74
DNMT1-220ENST00000589351 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.16□□□□□ -1.74
DNMT1-220ENST00000589351 SMCO3A2RU48 225 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 BMPR1BO00238 502 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 BET1O15155 118 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 IGLV2-23P01705 113 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 TRBV12-3P01733 135 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 SCTP09683 121 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 CD3GP09693 182 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 APELAP0DMC3 54 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 CBLN1P23435 193 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 WNT4P56705 351 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 UBE2KP61086 200 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 EWSR1Q01844 656 aaKnown RBP eCLIP4.16□□□□□ -1.74
DNMT1-220ENST00000589351 TNFRSF9Q07011 255 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 ZNF415Q09FC8 603 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 ACSM3Q53FZ2 586 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 HSD17B12Q53GQ0 312 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 ZNF57Q68EA5 555 aaPredicted RBP4.16□□□□□ -1.74
DNMT1-220ENST00000589351 OR10K2Q6IF99 312 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 AKAP14Q86UN6 197 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 GPHB5Q86YW7 130 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 TTC9CQ8N5M4 171 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 OR6M1Q8NGM8 313 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 OSR1Q8TAX0 266 aaPredicted RBP4.16□□□□□ -1.74
DNMT1-220ENST00000589351 APH1BQ8WW43 257 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 CYGBQ8WWM9 190 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 SRSF12Q8WXF0 261 aaKnown RBP4.16□□□□□ -1.74
DNMT1-220ENST00000589351 TMEM37Q8WXS4 190 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 MARC2Q969Z3 335 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 OVOL2Q9BRP0 275 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 GINS4Q9BRT9 223 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 DCUN1D5Q9BTE7 237 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 PARP12Q9H0J9 701 aaKnown RBP4.16□□□□□ -1.74
DNMT1-220ENST00000589351 OR2D2Q9H210 308 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 PLGRKTQ9HBL7 147 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 ZC4H2Q9NQZ6 224 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 AK3Q9UIJ7 227 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 TP53TG1Q9Y2A0 90 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 ZNF257Q9Y2Q1 563 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 PRELID3BQ9Y3B1 194 aa4.16□□□□□ -1.74
DNMT1-220ENST00000589351 LYSTQ99698 3801 aa4.15□□□□□ -1.74
DNMT1-220ENST00000589351 TRBV9A0A0B4J1U6 114 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 C2orf70A6NJV1 201 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 TMEM14DPA8MWL7 114 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 SOCS1O15524 211 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 FABP7O15540 132 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 CYB5BO43169 146 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 ARL6IP5O75915 188 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 OR2J3O76001 311 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 SCGNO76038 276 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 SLC22A5O76082 557 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 CRYZL1O95825 349 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 IFNA4P05014 189 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 DEFA4P12838 97 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 HIST1H1BP16401 226 aaKnown RBP4.15□□□□□ -1.75
DNMT1-220ENST00000589351 GADD45AP24522 165 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 MAS1LP35410 378 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 PSMD7P51665 324 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 LINC00205P59089 165 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 CDK10Q15131 360 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 VAMP3Q15836 100 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 PRSS8Q16651 343 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 C15orf32Q32M92 178 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 LGALS9CQ6DKI2 356 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 LAMTOR1Q6IAA8 161 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 LYG2Q86SG7 212 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 FAM89BQ8N5H3 189 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 DHRSXQ8N5I4 330 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 NANOGP1Q8N7R0 232 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 ZNF485Q8NCK3 441 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 VSTM2AQ8TAG5 236 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 EEF1AKMT3Q96AZ1 226 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 AIFM2Q9BRQ8 373 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 NICN1Q9BSH3 213 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 PECRQ9BY49 303 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 C6orf62Q9GZU0 229 aaPredicted RBP4.15□□□□□ -1.75
DNMT1-220ENST00000589351 LPAR5Q9H1C0 372 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 C8orf4Q9NR00 106 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 SDHAF2Q9NX18 166 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 MRPL27Q9P0M9 148 aaKnown RBP4.15□□□□□ -1.75
DNMT1-220ENST00000589351 ZNF230Q9UIE0 474 aaPredicted RBP4.15□□□□□ -1.75
DNMT1-220ENST00000589351 FLVCR2Q9UPI3 526 aa4.15□□□□□ -1.75
DNMT1-220ENST00000589351 TRBV6-7A0A0A0MS04 114 aa4.14□□□□□ -1.75
DNMT1-220ENST00000589351 TRBV7-1A0A0A6YYK4 115 aa4.14□□□□□ -1.75
DNMT1-220ENST00000589351 A0A0J9YWU9 116 aa4.14□□□□□ -1.75
DNMT1-220ENST00000589351 E5RGE8 158 aa4.14□□□□□ -1.75
DNMT1-220ENST00000589351 PPP5D1E7EU14 171 aa4.14□□□□□ -1.75
DNMT1-220ENST00000589351 SLC17A2O00624 439 aa4.14□□□□□ -1.75
DNMT1-220ENST00000589351 DENRO43583 198 aaKnown RBP4.14□□□□□ -1.75
DNMT1-220ENST00000589351 PRH1P02810 166 aa4.14□□□□□ -1.75
DNMT1-220ENST00000589351 CDK1P06493 297 aa4.14□□□□□ -1.75
DNMT1-220ENST00000589351 CTXN2P0C2S0 81 aa4.14□□□□□ -1.75
DNMT1-220ENST00000589351 RD3LP0DJH9 198 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms