RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CD300EQ496F6 205 aaPredicted RBP11.24□□□□□ -0.61
ATG4D-207ENST00000587256 UNQ9165/PRO28630Q6UXU0 137 aa11.24□□□□□ -0.61
ATG4D-207ENST00000587256 Q6ZRM9 215 aa11.24□□□□□ -0.61
ATG4D-207ENST00000587256 GTSCR1Q86UQ5 136 aa11.24□□□□□ -0.61
ATG4D-207ENST00000587256 GPR146Q96CH1 333 aa11.24□□□□□ -0.61
ATG4D-207ENST00000587256 ATP6V0BQ99437 205 aa11.24□□□□□ -0.61
ATG4D-207ENST00000587256 SLC25A21Q9BQT8 299 aaPredicted RBP11.24□□□□□ -0.61
ATG4D-207ENST00000587256 GAR1Q9NY12 217 aaKnown RBP11.24□□□□□ -0.61
ATG4D-207ENST00000587256 UFC1Q9Y3C8 167 aa11.24□□□□□ -0.61
ATG4D-207ENST00000587256 A0A0B4J2A0 478 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 IZUMO1RA6ND01 250 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 INS-IGF2F8WCM5 200 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 I3L2K1 104 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 NXPH3O95157 252 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 SULT1A3P0DMM9 295 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 SULT1A4P0DMN0 295 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 CBLN1P23435 193 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 VAMP1P23763 118 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 SUB1P53999 127 aaKnown RBP eCLIP11.23□□□□□ -0.61
ATG4D-207ENST00000587256 SPCS3P61009 180 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 SUPT4H1P63272 117 aaKnown RBP11.23□□□□□ -0.61
ATG4D-207ENST00000587256 BAK1Q16611 211 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 C11orf87Q6NUJ2 197 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 ADAMTSL5Q6ZMM2 481 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 LGI3Q8N145 548 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 TMEM190Q8WZ59 177 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 CHRDL1Q9BU40 450 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 TECRQ9NZ01 308 aaKnown RBP11.23□□□□□ -0.61
ATG4D-207ENST00000587256 SHPKQ9UHJ6 478 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 DNAH9Q9NYC9 4486 aa11.23□□□□□ -0.61
ATG4D-207ENST00000587256 PIGBOS1A0A0B4J2F0 54 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 LINC00854A0A1B0GVQ3 168 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 NAP1L6A6NFF2 107 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 CEBPZOSA8MTT3 80 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 F8W735 103 aaPredicted RBP11.22□□□□□ -0.61
ATG4D-207ENST00000587256 CORTO00230 105 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 NUPL2O15504 423 aaKnown RBP11.22□□□□□ -0.61
ATG4D-207ENST00000587256 IGHV3-48P01763 117 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 RNASE2P10153 161 aaKnown RBP11.22□□□□□ -0.61
ATG4D-207ENST00000587256 MFAP4P55083 255 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 RBMS2Q15434 407 aaKnown RBP11.22□□□□□ -0.61
ATG4D-207ENST00000587256 GUCA2BQ16661 112 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 AARDQ4LEZ3 155 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 TM4SF20Q53R12 229 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 TMEM128Q5BJH2 165 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 CENPSQ8N2Z9 138 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 UXS1Q8NBZ7 420 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 OR52E5Q8NH55 327 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 ASCL2Q99929 193 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 C20orf24Q9BUV8 137 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 ZNF436Q9C0F3 470 aaPredicted RBP11.22□□□□□ -0.61
ATG4D-207ENST00000587256 HEYLQ9NQ87 328 aaPredicted RBP11.22□□□□□ -0.61
ATG4D-207ENST00000587256 SELENOKQ9Y6D0 94 aa11.22□□□□□ -0.61
ATG4D-207ENST00000587256 NDUFA4O00483 81 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 GNG7O60262 68 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 FRMD6-AS1P0C7T7 363 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 ADMP35318 185 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 CCR6P51684 374 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 ELLP55199 621 aaPredicted RBP11.21□□□□□ -0.61
ATG4D-207ENST00000587256 RELQ04864 619 aaPredicted RBP11.21□□□□□ -0.61
ATG4D-207ENST00000587256 DEFB114Q30KQ6 69 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 BTNL8Q6UX41 500 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 LYZL2Q7Z4W2 148 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 MARC2Q969Z3 335 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 TXN2Q99757 166 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 DAZ1Q9NQZ3 744 aaKnown RBP11.21□□□□□ -0.61
ATG4D-207ENST00000587256 CACFD1Q9UGQ2 172 aa11.21□□□□□ -0.61
ATG4D-207ENST00000587256 IGHV3OR16-8A0A075B7F1 116 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 CENPXA8MT69 81 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 IGHV4-30-4P0DP06 118 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 IL7P13232 177 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 OPRK1P41145 380 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 HTR2BP41595 481 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 NPBWR1P48145 328 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 CD81P60033 236 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 SMCO1Q147U7 214 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 NMSQ5H8A3 153 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 DUSP18Q8NEJ0 188 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 WDR89Q96FK6 387 aaPredicted RBP11.2□□□□□ -0.62
ATG4D-207ENST00000587256 SDHCQ99643 169 aaPredicted RBP11.2□□□□□ -0.62
ATG4D-207ENST00000587256 MLXQ9UH92 298 aa11.2□□□□□ -0.62
ATG4D-207ENST00000587256 DUXBA0A1W2PPF3 345 aa11.19□□□□□ -0.62
ATG4D-207ENST00000587256 YIF1AO95070 293 aa11.19□□□□□ -0.62
ATG4D-207ENST00000587256 CTSGP08311 255 aa11.19□□□□□ -0.62
ATG4D-207ENST00000587256 NHLRC4P0CG21 123 aaPredicted RBP11.19□□□□□ -0.62
ATG4D-207ENST00000587256 FCGR2BP31994 310 aaPredicted RBP11.19□□□□□ -0.62
ATG4D-207ENST00000587256 PPP1R1AQ13522 171 aa11.19□□□□□ -0.62
ATG4D-207ENST00000587256 TMEM61Q8N0U2 210 aa11.19□□□□□ -0.62
ATG4D-207ENST00000587256 Q8N1Y9 231 aa11.19□□□□□ -0.62
ATG4D-207ENST00000587256 SLC24A4Q8NFF2 622 aa11.19□□□□□ -0.62
ATG4D-207ENST00000587256 OR1S1Q8NH92 325 aa11.19□□□□□ -0.62
ATG4D-207ENST00000587256 HIPK2Q9H2X6 1198 aa11.19□□□□□ -0.62
ATG4D-207ENST00000587256 MRPL27Q9P0M9 148 aaKnown RBP11.19□□□□□ -0.62
ATG4D-207ENST00000587256 ZNF207O43670 478 aaKnown RBP11.18□□□□□ -0.62
ATG4D-207ENST00000587256 SCGB2A1O75556 95 aa11.18□□□□□ -0.62
ATG4D-207ENST00000587256 NDUFB6O95139 128 aa11.18□□□□□ -0.62
ATG4D-207ENST00000587256 SFT2D2O95562 160 aa11.18□□□□□ -0.62
ATG4D-207ENST00000587256 TNFRSF9Q07011 255 aa11.18□□□□□ -0.62
ATG4D-207ENST00000587256 BSXQ3C1V8 233 aa11.18□□□□□ -0.62
ATG4D-207ENST00000587256 ANKRD55Q3KP44 614 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms