RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 PJVKQ0ZLH3 352 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 AKAP6Q13023 2319 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 LY6EQ16553 131 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 VWC2Q2TAL6 325 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 FFAR4Q5NUL3 377 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 LDLRAD2Q5SZI1 272 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 PXDC1Q5TGL8 231 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 ACSM6Q6P461 480 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 UNQ5815/PRO19632Q6UWF5 114 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 SLC35E3Q7Z769 313 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 COMMD7Q86VX2 200 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 TMEM219Q86XT9 240 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 COMMD1Q8N668 190 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 C5orf56Q8N8D9 126 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 Q8N9W7 124 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 C17orf50Q8WW18 174 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 ACY3Q96HD9 319 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 P2RX4Q99571 388 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 RSG1Q9BU20 258 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 ARV1Q9H2C2 271 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 YAE1D1Q9NRH1 226 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 ZNF355PQ9NSJ1 428 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 GAR1Q9NY12 217 aaKnown RBP4.93□□□□□ -1.62
LIG3-206ENST00000586058 WDR83OSQ9Y284 106 aa4.93□□□□□ -1.62
LIG3-206ENST00000586058 TRAV30A0A087WSZ9 112 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 PMS2P5A8MQ11 134 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 ATP6V1G1O75348 118 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 H2AFB1P0C5Y9 115 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 AREGP15514 252 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 S100A1P23297 94 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 PAX6P26367 422 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 NPBWR1P48145 328 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 CDC34P49427 236 aaPredicted RBP4.92□□□□□ -1.62
LIG3-206ENST00000586058 TAS2R45P59539 299 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 B2MP61769 119 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 DEFB112Q30KQ8 113 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 BSXQ3C1V8 233 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 OXLD1Q5BKU9 147 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 KLF17Q5JT82 389 aaPredicted RBP4.92□□□□□ -1.62
LIG3-206ENST00000586058 FAM120AOSQ5T036 256 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 IL34Q6ZMJ4 242 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 C9orf139Q6ZV77 190 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 TMEM144Q7Z5S9 345 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 HAPLN4Q86UW8 402 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 BPIFCQ8NFQ6 507 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 OR1L4Q8NGR5 311 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 SGMS2Q8NHU3 365 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 FAM110DQ8TAY7 271 aaPredicted RBP4.92□□□□□ -1.62
LIG3-206ENST00000586058 NARS2Q96I59 477 aaKnown RBP4.92□□□□□ -1.62
LIG3-206ENST00000586058 RITA1Q96K30 269 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 CXorf58Q96LI9 332 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 CITED4Q96RK1 184 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 PFDN5Q99471 154 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 RNF2Q99496 336 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 FAM103A1Q9BTL3 118 aaKnown RBP4.92□□□□□ -1.62
LIG3-206ENST00000586058 ACTR3CQ9C0K3 210 aaPredicted RBP4.92□□□□□ -1.62
LIG3-206ENST00000586058 NPFFR1Q9GZQ6 430 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 SH3BGRL3Q9H299 93 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 WFDC1Q9HC57 220 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 ZMAT5Q9UDW3 170 aaKnown RBP4.92□□□□□ -1.62
LIG3-206ENST00000586058 VPREB3Q9UKI3 123 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 RNF24Q9Y225 148 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 PXMP4Q9Y6I8 212 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 TNCP24821 2201 aa4.92□□□□□ -1.62
LIG3-206ENST00000586058 SMG1Q96Q15 3661 aaKnown RBP4.91□□□□□ -1.62
LIG3-206ENST00000586058 IGHV7-81A0A0B4J1V7 117 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 TRAV41A0A0B4J266 112 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 CTXND1A0A1B0GTU2 59 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 LINC00862A6NCI5 91 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 A6NDX4 124 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 TEX22C9J3V5 150 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 AP4M1O00189 453 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 AGPAT2O15120 278 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 ATP6V0E1O15342 81 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 GNG7O60262 68 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 COX7A2P2O60397 106 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 NMBP08949 121 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 CTRB1P17538 263 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 M6PRP20645 277 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 TAGLN2P37802 199 aaKnown RBP4.91□□□□□ -1.62
LIG3-206ENST00000586058 IER3P46695 156 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 PPT1P50897 306 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 RND2P52198 227 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 RHOBP62745 196 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 SLC35B1P78383 322 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 ARL16Q0P5N6 197 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 Q56UQ5 140 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 FAM209BQ5JX69 171 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 CTRB2Q6GPI1 263 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 UQCC3Q6UW78 93 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 KRTAP1-3Q8IUG1 177 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 TTC9CQ8N5M4 171 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 OR10G4Q8NGN3 311 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 OR10G9Q8NGN4 311 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 OR10G7Q8NGN6 311 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 PCNPQ8WW12 178 aaKnown RBP4.91□□□□□ -1.62
LIG3-206ENST00000586058 BSCL2Q96G97 398 aaPredicted RBP4.91□□□□□ -1.62
LIG3-206ENST00000586058 AJUBAQ96IF1 538 aa4.91□□□□□ -1.62
LIG3-206ENST00000586058 JMJD8Q96S16 334 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms