RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 COMMD1Q8N668 190 aa13.26□□□□□ -0.29
HMG20B-215ENST00000585741 OR4X2Q8NGF9 303 aa13.26□□□□□ -0.29
HMG20B-215ENST00000585741 LINC01006Q8NI28 216 aa13.26□□□□□ -0.29
HMG20B-215ENST00000585741 PINX1Q96BK5 328 aaKnown RBP13.26□□□□□ -0.29
HMG20B-215ENST00000585741 MS4A10Q96PG2 267 aa13.26□□□□□ -0.29
HMG20B-215ENST00000585741 RNF126Q9BV68 326 aa13.26□□□□□ -0.29
HMG20B-215ENST00000585741 SERTAD4Q9NUC0 356 aa13.26□□□□□ -0.29
HMG20B-215ENST00000585741 PLXNB1O43157 2135 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 RPS10-NUDT3A0A1W2PQS6 291 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 PRH1P02810 166 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 TRGV3P03979 118 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 METTL15P1P0C7V9 234 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 RPL12P30050 165 aaKnown RBP13.25□□□□□ -0.29
HMG20B-215ENST00000585741 OPRK1P41145 380 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 PAX9P55771 341 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 TPPP2P59282 170 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 FOXL1Q12952 345 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 Q5BKY6 102 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 ETFRF1Q6IPR1 90 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 KLHDC1Q8N7A1 406 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 OR10P1Q8NGE3 313 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 OR4C12Q96R67 309 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 NEURL2Q9BR09 285 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 SLA2Q9H6Q3 261 aa13.25□□□□□ -0.29
HMG20B-215ENST00000585741 TET2Q6N021 2002 aaPredicted RBP13.25□□□□□ -0.29
HMG20B-215ENST00000585741 C15orf62A8K5M9 175 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 ARPC5O15511 151 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 OR2J3O76001 311 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 TMEM50AO95807 157 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 C1QBP02746 253 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 ELANEP08246 267 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 LYL1P12980 280 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 PPIFP30405 207 aaKnown RBP13.24□□□□□ -0.29
HMG20B-215ENST00000585741 SULT1A1P50225 295 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 HBG1P69891 147 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 HBG2P69892 147 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 EXOSC2Q13868 293 aaKnown RBP13.24□□□□□ -0.29
HMG20B-215ENST00000585741 C19orf35Q6ZS72 473 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 LILRB2Q8N423 598 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 TMEM252Q8N6L7 170 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 OR5AU1Q8NGC0 362 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 RNASEH2CQ8TDP1 164 aaKnown RBP13.24□□□□□ -0.29
HMG20B-215ENST00000585741 FBXL7Q9UJT9 491 aa13.24□□□□□ -0.29
HMG20B-215ENST00000585741 CST7O76096 145 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 MDKP21741 143 aaPredicted RBP13.23□□□□□ -0.29
HMG20B-215ENST00000585741 RHOGP84095 191 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 BAXQ07812 192 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 FOXE3Q13461 319 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 BSXQ3C1V8 233 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 C19orf54Q5BKX5 351 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 TMEM14EPQ6UXP3 125 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 TMEM217Q8N7C4 229 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 C3orf56Q8N813 242 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 HYLS1Q96M11 299 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 C11orf1Q9H5F2 150 aa13.23□□□□□ -0.29
HMG20B-215ENST00000585741 A0A0G2JLM5 398 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 SMCO3A2RU48 225 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 FAM223BA6NKX1 122 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 IGHG4P01861 327 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 AP2S1P53680 142 aaPredicted RBP13.22□□□□□ -0.29
HMG20B-215ENST00000585741 EWSR1Q01844 656 aaKnown RBP eCLIP13.22□□□□□ -0.29
HMG20B-215ENST00000585741 CFHR3Q02985 330 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 ATP5G2Q06055 141 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 KHDC1LQ5JSQ8 128 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 FAM223AQ8IWN6 122 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 NECAP1Q8NC96 275 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 OR1S2Q8NGQ3 325 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 SLC35E1Q96K37 410 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 MFFQ9GZY8 342 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 CMYA5Q8N3K9 4069 aa13.22□□□□□ -0.29
HMG20B-215ENST00000585741 IGLV11-55A0A075B6I3 123 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 IGSF23A1L1A6 192 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 SOX15O60248 233 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 SCGB2A1O75556 95 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 MT-CO2P00403 227 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 IGLV1-40P01703 118 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 S100A11P31949 105 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 RAB9AP51151 201 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 CD300CQ08708 224 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 ACOT7LQ6ZUV0 252 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 USMG5Q96IX5 58 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 CXorf58Q96LI9 332 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 TNFSF18Q9UNG2 199 aa13.21□□□□□ -0.29
HMG20B-215ENST00000585741 IGHV3-21A0A0B4J1V1 117 aa13.2□□□□□ -0.3
HMG20B-215ENST00000585741 HMSDA8MTL9 139 aa13.2□□□□□ -0.3
HMG20B-215ENST00000585741 SLC38A11Q08AI6 406 aa13.2□□□□□ -0.3
HMG20B-215ENST00000585741 C15orf32Q32M92 178 aa13.2□□□□□ -0.3
HMG20B-215ENST00000585741 AWAT1Q58HT5 328 aa13.2□□□□□ -0.3
HMG20B-215ENST00000585741 ACSM6Q6P461 480 aa13.2□□□□□ -0.3
HMG20B-215ENST00000585741 EEF1AKMT3Q96AZ1 226 aa13.2□□□□□ -0.3
HMG20B-215ENST00000585741 FANCD2OSQ96PS1 177 aa13.2□□□□□ -0.3
HMG20B-215ENST00000585741 AQP10Q96PS8 301 aa13.2□□□□□ -0.3
HMG20B-215ENST00000585741 HSPB11Q9Y547 144 aa13.2□□□□□ -0.3
HMG20B-215ENST00000585741 TRBV9A0A0B4J1U6 114 aa13.19□□□□□ -0.3
HMG20B-215ENST00000585741 NDUFB8O95169 186 aa13.19□□□□□ -0.3
HMG20B-215ENST00000585741 BRI3O95415 125 aa13.19□□□□□ -0.3
HMG20B-215ENST00000585741 PSMB8P28062 276 aa13.19□□□□□ -0.3
HMG20B-215ENST00000585741 GPX4P36969 197 aaPredicted RBP13.19□□□□□ -0.3
HMG20B-215ENST00000585741 EIF2B2P49770 351 aaKnown RBP13.19□□□□□ -0.3
HMG20B-215ENST00000585741 MFAP2P55001 183 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms