RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 CASTOR2A6NHX0 329 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 GGTLC3B5MD39 225 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 C9JAW5 83 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 PRKNO60260 465 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-203ENST00000585448 PAGE4O60829 102 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 TBL1XO60907 577 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 OR2J3O76001 311 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 SNCGO76070 127 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 CST7O76096 145 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 LEPROTL1O95214 131 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 PLAUP00749 431 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 RENP00797 406 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 CSN3P07498 182 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 ZNF688P0C7X2 276 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 NCBP2P52298 156 aaKnown RBP eCLIP4.98□□□□□ -1.61
SMAD4-203ENST00000585448 GNB1P62873 340 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 MRPS6P82932 125 aaKnown RBP4.98□□□□□ -1.61
SMAD4-203ENST00000585448 TNFAIP6P98066 277 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-203ENST00000585448 FHL1Q13642 323 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 MRPL23Q16540 153 aaKnown RBP4.98□□□□□ -1.61
SMAD4-203ENST00000585448 LINC01545Q5VT33 79 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 FAM19A5Q7Z5A7 132 aaPredicted RBP4.98□□□□□ -1.61
SMAD4-203ENST00000585448 TMEM219Q86XT9 240 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 TEX45Q8NA69 505 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 TMEM178AQ8NBL3 297 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 VN1R2Q8NFZ6 395 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 OR13A1Q8NGR1 328 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 OR51H1Q8NH63 302 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 OTOSQ8NHW6 89 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 ARPC1AQ92747 370 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 BADQ92934 168 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 NAT6Q93015 286 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 RAB37Q96AX2 223 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 ZC2HC1AQ96GY0 325 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 TMEM59Q9BXS4 323 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 OSTCQ9NRP0 149 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 TNFRSF19Q9NS68 423 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 PRO0461Q9UI25 63 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 HIGD1AQ9Y241 93 aa4.98□□□□□ -1.61
SMAD4-203ENST00000585448 ATG2AQ2TAZ0 1938 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 SCN1AP35498 2009 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 A0A0B4J2E0 115 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 A0A1B0GTH9 108 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 A0A1B0GX12 115 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 PRSS37A4D1T9 235 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 IZUMO1RA6ND01 250 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 DDTLA6NHG4 134 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-203ENST00000585448 MBD3L5A6NJ08 208 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-203ENST00000585448 RS1O15537 224 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 OR2H2O95918 312 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 CRYGDP07320 174 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 C8orf89P0DMQ9 161 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 FGF6P10767 208 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 CYBAP13498 195 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 CPMP14384 443 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 COX5AP20674 150 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 CD27P26842 260 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 FCGR2BP31994 310 aaPredicted RBP4.97□□□□□ -1.61
SMAD4-203ENST00000585448 OPRK1P41145 380 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 RPS24P62847 133 aaKnown RBP4.97□□□□□ -1.61
SMAD4-203ENST00000585448 TWIST1Q15672 202 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 ZNF77Q15935 545 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 TAL2Q16559 108 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 POM121L1PQ3SYA9 428 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 IBA57Q5T440 356 aaKnown RBP4.97□□□□□ -1.61
SMAD4-203ENST00000585448 C10orf25Q5T742 122 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 LYRM7Q5U5X0 104 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 SH2D6Q7Z4S9 175 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 ANKRD37Q7Z713 158 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 ZNF695Q8IW36 515 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 ODF3L1Q8IXM7 274 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 ZNF525Q8N782 197 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 RDH5Q92781 318 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 TAF15Q92804 592 aaKnown RBP eCLIP4.97□□□□□ -1.61
SMAD4-203ENST00000585448 TM4SF19Q96DZ7 209 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 NUS1Q96E22 293 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 PRADC1Q9BSG0 188 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 OR2H1Q9GZK4 316 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 OR1A2Q9Y585 309 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 INSIG2Q9Y5U4 225 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 R4GMQ9 66 aa4.97□□□□□ -1.61
SMAD4-203ENST00000585448 THSD7AQ9UPZ6 1657 aa4.96□□□□□ -1.61
SMAD4-203ENST00000585448 GREB1Q4ZG55 1949 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 A0A087WV48 116 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 TRAV5A0A0B4J249 113 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 A0A1W2PPV9 198 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 IGLL5B9A064 214 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 PLPP1O14494 284 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 TNFSF11O14788 317 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 CHST1O43916 411 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 NDUFB4O95168 129 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 MYOD1P15172 320 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 RPL7P18124 248 aaKnown RBP4.96□□□□□ -1.62
SMAD4-203ENST00000585448 NPPCP23582 126 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 HOXD9P28356 352 aaPredicted RBP4.96□□□□□ -1.62
SMAD4-203ENST00000585448 MPV17P39210 176 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 TMEM50BP56557 158 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 CLDN17P56750 224 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 HERV-K104P61576 105 aa4.96□□□□□ -1.62
SMAD4-203ENST00000585448 RPS15AP62244 130 aaKnown RBP4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms