RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 SCGB3A2Q96PL1 93 aa15.4■□□□□ 0.06
SS18-224ENST00000584083 CHRDL1Q9BU40 450 aa15.4■□□□□ 0.06
SS18-224ENST00000584083 MRPL27Q9P0M9 148 aaKnown RBP15.4■□□□□ 0.06
SS18-224ENST00000584083 A0A0G2JRQ6 117 aa15.39■□□□□ 0.05
SS18-224ENST00000584083 CRYM-AS1A6NIL9 109 aa15.39■□□□□ 0.05
SS18-224ENST00000584083 F8W735 103 aaPredicted RBP15.39■□□□□ 0.05
SS18-224ENST00000584083 I3L2K1 104 aa15.39■□□□□ 0.05
SS18-224ENST00000584083 MT-CO2P00403 227 aa15.39■□□□□ 0.05
SS18-224ENST00000584083 CD7P09564 240 aa15.39■□□□□ 0.05
SS18-224ENST00000584083 HOXA1P49639 335 aaPredicted RBP15.39■□□□□ 0.05
SS18-224ENST00000584083 BTNL8Q6UX41 500 aa15.39■□□□□ 0.05
SS18-224ENST00000584083 TMEM61Q8N0U2 210 aa15.39■□□□□ 0.05
SS18-224ENST00000584083 TMEM190Q8WZ59 177 aa15.39■□□□□ 0.05
SS18-224ENST00000584083 RBPMSQ93062 196 aaKnown RBP15.39■□□□□ 0.05
SS18-224ENST00000584083 C20orf24Q9BUV8 137 aa15.39■□□□□ 0.05
SS18-224ENST00000584083 RBM38Q9H0Z9 239 aaKnown RBP15.39■□□□□ 0.05
SS18-224ENST00000584083 ENY2Q9NPA8 101 aa15.39■□□□□ 0.05
SS18-224ENST00000584083 NDUFA4O00483 81 aa15.38■□□□□ 0.05
SS18-224ENST00000584083 NUPL2O15504 423 aaKnown RBP15.38■□□□□ 0.05
SS18-224ENST00000584083 SCAF4O95104 1147 aaKnown RBP15.38■□□□□ 0.05
SS18-224ENST00000584083 IGHV3-48P01763 117 aa15.38■□□□□ 0.05
SS18-224ENST00000584083 ADMP35318 185 aa15.38■□□□□ 0.05
SS18-224ENST00000584083 TMEM268Q5VZI3 342 aa15.38■□□□□ 0.05
SS18-224ENST00000584083 FAM219AQ8IW50 185 aa15.38■□□□□ 0.05
SS18-224ENST00000584083 SELENOHQ8IZQ5 122 aaKnown RBP15.38■□□□□ 0.05
SS18-224ENST00000584083 LHFPL5Q8TAF8 219 aa15.38■□□□□ 0.05
SS18-224ENST00000584083 KCNIP3Q9Y2W7 256 aa15.38■□□□□ 0.05
SS18-224ENST00000584083 IGHV3OR16-8A0A075B7F1 116 aa15.37■□□□□ 0.05
SS18-224ENST00000584083 CTSGP08311 255 aa15.37■□□□□ 0.05
SS18-224ENST00000584083 C8orf88P0DMB2 117 aa15.37■□□□□ 0.05
SS18-224ENST00000584083 FAUP35544 74 aaKnown RBP15.37■□□□□ 0.05
SS18-224ENST00000584083 SUB1P53999 127 aaKnown RBP eCLIP15.37■□□□□ 0.05
SS18-224ENST00000584083 Q6ZRM9 215 aa15.37■□□□□ 0.05
SS18-224ENST00000584083 RBPMS2Q6ZRY4 209 aaKnown RBP15.37■□□□□ 0.05
SS18-224ENST00000584083 TXN2Q99757 166 aa15.37■□□□□ 0.05
SS18-224ENST00000584083 DAZ1Q9NQZ3 744 aaKnown RBP15.37■□□□□ 0.05
SS18-224ENST00000584083 CTNNBIP1Q9NSA3 81 aaPredicted RBP15.37■□□□□ 0.05
SS18-224ENST00000584083 ZNF701M0R085 212 aaPredicted RBP15.36■□□□□ 0.05
SS18-224ENST00000584083 ZNF207O43670 478 aaKnown RBP15.36■□□□□ 0.05
SS18-224ENST00000584083 AKR1C4P17516 323 aa15.36■□□□□ 0.05
SS18-224ENST00000584083 AP3S2P59780 193 aa15.36■□□□□ 0.05
SS18-224ENST00000584083 RELQ04864 619 aaPredicted RBP15.36■□□□□ 0.05
SS18-224ENST00000584083 SLC16A13Q7RTY0 426 aa15.36■□□□□ 0.05
SS18-224ENST00000584083 TOMM5Q8N4H5 51 aa15.36■□□□□ 0.05
SS18-224ENST00000584083 OR52B4Q8NGK2 314 aa15.36■□□□□ 0.05
SS18-224ENST00000584083 TM2D3Q9BRN9 247 aa15.36■□□□□ 0.05
SS18-224ENST00000584083 V9GYH0 126 aa15.36■□□□□ 0.05
SS18-224ENST00000584083 OR11H12B2RN74 326 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 INS-IGF2F8WCM5 200 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 GNG7O60262 68 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 SPCS3P61009 180 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 KLF9Q13886 244 aaPredicted RBP15.35■□□□□ 0.05
SS18-224ENST00000584083 HAGHQ16775 308 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 ANKRD55Q3KP44 614 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 DEFB125Q8N687 156 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 TRIM63Q969Q1 353 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 TMEM230Q96A57 120 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 GPR146Q96CH1 333 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 CACNG5Q9UF02 275 aa15.35■□□□□ 0.05
SS18-224ENST00000584083 TRAV25A0A0B4J276 109 aa15.34■□□□□ 0.05
SS18-224ENST00000584083 YIF1AO95070 293 aa15.34■□□□□ 0.05
SS18-224ENST00000584083 RNASE2P10153 161 aaKnown RBP15.34■□□□□ 0.05
SS18-224ENST00000584083 FCGR2BP31994 310 aaPredicted RBP15.34■□□□□ 0.05
SS18-224ENST00000584083 ZNF79Q15937 498 aa15.34■□□□□ 0.05
SS18-224ENST00000584083 DUSP18Q8NEJ0 188 aa15.34■□□□□ 0.05
SS18-224ENST00000584083 WFDC10AQ9H1F0 79 aa15.34■□□□□ 0.05
SS18-224ENST00000584083 PRR13Q9NZ81 148 aa15.34■□□□□ 0.05
SS18-224ENST00000584083 TMEM56-RWDD3S4R434 201 aa15.34■□□□□ 0.05
SS18-224ENST00000584083 STAB2Q8WWQ8 2551 aa15.33■□□□□ 0.05
SS18-224ENST00000584083 TENM3Q9P273 2699 aa15.33■□□□□ 0.05
SS18-224ENST00000584083 C15orf62A8K5M9 175 aa15.33■□□□□ 0.04
SS18-224ENST00000584083 K7EMT4 169 aa15.33■□□□□ 0.04
SS18-224ENST00000584083 CORTO00230 105 aa15.33■□□□□ 0.04
SS18-224ENST00000584083 NPBWR1P48145 328 aa15.33■□□□□ 0.04
SS18-224ENST00000584083 TMEM187Q14656 261 aa15.33■□□□□ 0.04
SS18-224ENST00000584083 SPANXN2Q5MJ10 180 aa15.33■□□□□ 0.04
SS18-224ENST00000584083 CCDC190Q86UF4 302 aa15.33■□□□□ 0.04
SS18-224ENST00000584083 GALNT14Q96FL9 552 aa15.33■□□□□ 0.04
SS18-224ENST00000584083 SRD5A3Q9H8P0 318 aa15.33■□□□□ 0.04
SS18-224ENST00000584083 OR52E5Q8NH55 327 aa15.32■□□□□ 0.04
SS18-224ENST00000584083 IL22RA2Q969J5 263 aa15.32■□□□□ 0.04
SS18-224ENST00000584083 SPATA25Q9BR10 227 aa15.32■□□□□ 0.04
SS18-224ENST00000584083 HEYLQ9NQ87 328 aaPredicted RBP15.32■□□□□ 0.04
SS18-224ENST00000584083 HUWE1Q7Z6Z7 4374 aaKnown RBP15.31■□□□□ 0.04
SS18-224ENST00000584083 CEBPZOSA8MTT3 80 aa15.31■□□□□ 0.04
SS18-224ENST00000584083 ANXA3P12429 323 aa15.31■□□□□ 0.04
SS18-224ENST00000584083 AARDQ4LEZ3 155 aa15.31■□□□□ 0.04
SS18-224ENST00000584083 LAMTOR1Q6IAA8 161 aa15.31■□□□□ 0.04
SS18-224ENST00000584083 TMED4Q7Z7H5 227 aa15.31■□□□□ 0.04
SS18-224ENST00000584083 RBMY1BA6NDE4 496 aaKnown RBP15.3■□□□□ 0.04
SS18-224ENST00000584083 RBMY1EA6NEQ0 496 aaKnown RBP15.3■□□□□ 0.04
SS18-224ENST00000584083 NXPH3O95157 252 aa15.3■□□□□ 0.04
SS18-224ENST00000584083 RBMY1DP0C7P1 496 aaKnown RBP15.3■□□□□ 0.04
SS18-224ENST00000584083 SULT1A3P0DMM9 295 aa15.3■□□□□ 0.04
SS18-224ENST00000584083 SULT1A4P0DMN0 295 aa15.3■□□□□ 0.04
SS18-224ENST00000584083 OPRK1P41145 380 aa15.3■□□□□ 0.04
SS18-224ENST00000584083 HTR2BP41595 481 aa15.3■□□□□ 0.04
SS18-224ENST00000584083 SUPT4H1P63272 117 aaKnown RBP15.3■□□□□ 0.04
SS18-224ENST00000584083 PVRIGQ6DKI7 326 aa15.3■□□□□ 0.04
SS18-224ENST00000584083 SPAG8Q99932 426 aaPredicted RBP15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms