RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 FBXL12Q9NXK8 326 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 GLTPQ9NZD2 209 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 PKIGQ9Y2B9 76 aa1.06□□□□□ -2.24
PPP4R1-227ENST00000583988 FLG2Q5D862 2391 aaPredicted RBP1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 IGKV1D-43A0A0B4J1Z2 117 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 EXOC1LA0A1B0GW35 172 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 DPRXA6NFQ7 191 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 OR4C46A6NHA9 309 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 SDCBPO00560 298 aaPredicted RBP1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 RBP1P09455 135 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 RPS4Y1P22090 263 aaKnown RBP1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 KRTAP10-4P60372 401 aaPredicted RBP1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 LSM6P62312 80 aaKnown RBP1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 CDK10Q15131 360 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 TMED2Q15363 201 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 TMEM97Q5BJF2 176 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 OR8B3Q8NGG8 313 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 CT55Q8WUE5 264 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 RASSF5Q8WWW0 418 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 KLK6Q92876 244 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 TMEM106AQ96A25 262 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 TOMM6Q96B49 74 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 SCGB3A1Q96QR1 104 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 TSPAN32Q96QS1 320 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 NIPSNAP1Q9BPW8 284 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 ADAT1Q9BUB4 502 aaKnown RBP1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 DERL1Q9BUN8 251 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 TMEM147Q9BVK8 224 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 KIFC1Q9BW19 673 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 OR8D2Q9GZM6 311 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 DCSTAMPQ9H295 470 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 CISHQ9NSE2 258 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 MRPL27Q9P0M9 148 aaKnown RBP1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 FBXO5Q9UKT4 447 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 ARL2BPQ9Y2Y0 163 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 LHFPL6Q9Y693 200 aa1.05□□□□□ -2.24
PPP4R1-227ENST00000583988 BRWD1Q9NSI6 2320 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 DOCK5Q9H7D0 1870 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 CUL9Q8IWT3 2517 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 TRAV26-2A0A0B4J265 109 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 FUOMA2VDF0 154 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 SMIM9A6NGZ8 99 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 IBA57-AS1B1ANH7 110 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 TRAPPC2LH3BP13 241 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 FAAHO00519 579 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 FADS1O60427 444 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 S100A4P26447 101 aaKnown RBP1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 ZNF80P51504 273 aaPredicted RBP1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 RANP62826 216 aaKnown RBP1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 IAH1Q2TAA2 248 aaPredicted RBP1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 FAM173BQ6P4H8 233 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 DPPA3Q6W0C5 159 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 AAED1Q7RTV5 226 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 OOSP2Q86WS3 158 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 LINC00471Q8N535 108 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 GDPD1Q8N9F7 314 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 C9orf163Q8N9P6 203 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 WFDC11Q8NEX6 87 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 ITFG2Q969R8 447 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 C20orf27Q9GZN8 174 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 NMNAT1Q9HAN9 279 aaPredicted RBP1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 SLC39A9Q9NUM3 307 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 CKLFQ9UBR5 152 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 RTL1A6NKG5 1358 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 MTUS2Q5JR59 1369 aa1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 WRNQ14191 1432 aaPredicted RBP eCLIP1.04□□□□□ -2.24
PPP4R1-227ENST00000583988 HEATR5AQ86XA9 2040 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 HEATR5BQ9P2D3 2071 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 A0A0D9SG52 128 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 hADV38S2A0JD32 116 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 J3QRK9 145 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 PDE6DO43924 150 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 ATP5HO75947 161 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 CNIH1O95406 144 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 IFNA6P05013 189 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 CTXN2P0C2S0 81 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 DEFA4P12838 97 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 LIN52Q52LA3 116 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 MIR17HGQ75NE6 70 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 TRAPPC6BQ86SZ2 158 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 DNAJC9Q8WXX5 260 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 YIPF3Q9GZM5 350 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 TLNRD1Q9H1K6 362 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 C11orf68Q9H3H3 251 aaKnown RBP1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 PRELID3BQ9Y3B1 194 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 TONSLQ96HA7 1378 aa1.03□□□□□ -2.24
PPP4R1-227ENST00000583988 hCG_1818297A0A087WSY0 165 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 A0A087WUJ7 227 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 A8MT66 165 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 PIK3C2GO75747 1445 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 TCL1BO95988 128 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 HAND1O96004 215 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 IGKV1-5P01602 117 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 PMP2P02689 132 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 C8GP07360 202 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 SMIM10L2AP0DMW4 78 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 SMIM10L2BP0DMW5 78 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 PPIBP23284 216 aaKnown RBP1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 CASP1P29466 404 aa1.02□□□□□ -2.25
PPP4R1-227ENST00000583988 RPS20P60866 119 aaKnown RBP1.02□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms