RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 ZMAT5Q9UDW3 170 aaKnown RBP16.34■□□□□ 0.21
SMG8-203ENST00000578922 PLA2G2AP14555 144 aa16.34■□□□□ 0.21
SMG8-203ENST00000578922 ACOT6Q3I5F7 207 aaPredicted RBP16.34■□□□□ 0.21
SMG8-203ENST00000578922 C16orf82Q7Z2V1 217 aa16.34■□□□□ 0.21
SMG8-203ENST00000578922 RAB24Q969Q5 203 aa16.34■□□□□ 0.21
SMG8-203ENST00000578922 FLYWCH2Q96CP2 140 aaKnown RBP16.34■□□□□ 0.21
SMG8-203ENST00000578922 OR5B12Q96R08 314 aa16.34■□□□□ 0.21
SMG8-203ENST00000578922 PFDN5Q99471 154 aa16.34■□□□□ 0.21
SMG8-203ENST00000578922 SSX3Q99909 188 aa16.34■□□□□ 0.21
SMG8-203ENST00000578922 PARLQ9H300 379 aa16.34■□□□□ 0.21
SMG8-203ENST00000578922 SAA1P0DJI8 122 aaPredicted RBP16.33■□□□□ 0.2
SMG8-203ENST00000578922 LDLRAD2Q5SZI1 272 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 MOB3BQ86TA1 216 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 C10orf105Q8TEF2 133 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 PCGF1Q9BSM1 259 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 IGHV4-30-2A0A087WSY4 118 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 IGHV4-61A0A0C4DH41 118 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 H7BYZ3 331 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 HIST1H1BP16401 226 aaKnown RBP16.33■□□□□ 0.2
SMG8-203ENST00000578922 PRTN3P24158 256 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 RPP30P78346 268 aaKnown RBP16.33■□□□□ 0.2
SMG8-203ENST00000578922 OR51G1Q8NGK1 321 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 RPEQ96AT9 228 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 RPUSD4Q96CM3 377 aaKnown RBP16.33■□□□□ 0.2
SMG8-203ENST00000578922 RITA1Q96K30 269 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 WASHC3Q9Y3C0 194 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 INSIG2Q9Y5U4 225 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 PTPN13Q12923 2485 aa16.33■□□□□ 0.2
SMG8-203ENST00000578922 TET2Q6N021 2002 aaPredicted RBP16.33■□□□□ 0.2
SMG8-203ENST00000578922 KRTAP10-9P60411 292 aa16.32■□□□□ 0.2
SMG8-203ENST00000578922 PAX2Q02962 417 aa16.32■□□□□ 0.2
SMG8-203ENST00000578922 HCP5Q6MZN7 132 aa16.32■□□□□ 0.2
SMG8-203ENST00000578922 OR4F5Q8NH21 305 aa16.32■□□□□ 0.2
SMG8-203ENST00000578922 OR4F4Q96R69 305 aa16.32■□□□□ 0.2
SMG8-203ENST00000578922 IGHV2-70DA0A0C4DH43 119 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 C15orf61A6NNL5 157 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 GFI1BQ5VTD9 330 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 PDPNQ86YL7 162 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 OR4C13Q8NGP0 309 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 OSR1Q8TAX0 266 aaPredicted RBP16.31■□□□□ 0.2
SMG8-203ENST00000578922 WDR83OSQ9Y284 106 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 ABCA12Q86UK0 2595 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 IGHV1-3A0A0C4DH29 117 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 MPDU1O75352 247 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 GALR1P47211 349 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 TMEM177Q53S58 311 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 LHFPL4Q7Z7J7 247 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 OR4X1Q8NH49 305 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 HINT2Q9BX68 163 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 AMMECR1Q9Y4X0 333 aaPredicted RBP16.31■□□□□ 0.2
SMG8-203ENST00000578922 HILPDAQ9Y5L2 63 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 TNCP24821 2201 aa16.31■□□□□ 0.2
SMG8-203ENST00000578922 J3QKU1 62 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 CDC34P49427 236 aaPredicted RBP16.3■□□□□ 0.2
SMG8-203ENST00000578922 SPCS3P61009 180 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 POU2AF1Q16633 256 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 OR11H6Q8NGC7 330 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 DOPEY2Q9Y3R5 2298 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 ANKRD17O75179 2603 aaKnown RBP16.3■□□□□ 0.2
SMG8-203ENST00000578922 C15orf62A8K5M9 175 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 HTR1DP28221 377 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 COA6Q5JTJ3 125 aaKnown RBP16.3■□□□□ 0.2
SMG8-203ENST00000578922 TMEM183AQ8IXX5 376 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 OR52E5Q8NH55 327 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 TCF19Q9Y242 345 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 OR51B2Q9Y5P1 312 aa16.3■□□□□ 0.2
SMG8-203ENST00000578922 PPP5D1E7EU14 171 aa16.29■□□□□ 0.2
SMG8-203ENST00000578922 UPK2O00526 184 aa16.29■□□□□ 0.2
SMG8-203ENST00000578922 HMGB3O15347 200 aaKnown RBP16.29■□□□□ 0.2
SMG8-203ENST00000578922 PDE6DO43924 150 aa16.29■□□□□ 0.2
SMG8-203ENST00000578922 FABP4P15090 132 aa16.29■□□□□ 0.2
SMG8-203ENST00000578922 CD1BP29016 333 aa16.29■□□□□ 0.2
SMG8-203ENST00000578922 SRP14P37108 136 aaKnown RBP16.29■□□□□ 0.2
SMG8-203ENST00000578922 FAM3BP58499 235 aaPredicted RBP16.29■□□□□ 0.2
SMG8-203ENST00000578922 KIR3DL3Q8N743 410 aa16.29■□□□□ 0.2
SMG8-203ENST00000578922 TMEM14BQ9NUH8 114 aa16.29■□□□□ 0.2
SMG8-203ENST00000578922 ABCA2Q9BZC7 2435 aa16.29■□□□□ 0.2
SMG8-203ENST00000578922 LY6LH3BQJ8 138 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 PAGE4O60829 102 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 FOXH1O75593 365 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 TOX4O94842 621 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 HOXB4P17483 251 aaPredicted RBP16.28■□□□□ 0.2
SMG8-203ENST00000578922 MC5RP33032 325 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 HNF4GQ14541 408 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 PDLIM3Q53GG5 364 aaPredicted RBP16.28■□□□□ 0.2
SMG8-203ENST00000578922 SIRPDQ9H106 197 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 HEYLQ9NQ87 328 aaPredicted RBP16.28■□□□□ 0.2
SMG8-203ENST00000578922 FOXA2Q9Y261 457 aaPredicted RBP16.28■□□□□ 0.2
SMG8-203ENST00000578922 VWC2LB2RUY7 222 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 NDUFS8O00217 210 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 TPTE2P1Q5T6R2 138 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 C1orf122Q6ZSJ8 110 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 BTF3L4Q96K17 158 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 PACRGQ96M98 296 aaPredicted RBP16.28■□□□□ 0.2
SMG8-203ENST00000578922 TXNDC17Q9BRA2 123 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 DPM3Q9P2X0 92 aa16.28■□□□□ 0.2
SMG8-203ENST00000578922 SLC25A17O43808 307 aa16.27■□□□□ 0.2
SMG8-203ENST00000578922 IL6RP08887 468 aaPredicted RBP16.27■□□□□ 0.2
SMG8-203ENST00000578922 CD99P14209 185 aa16.27■□□□□ 0.2
SMG8-203ENST00000578922 PDZD11Q5EBL8 140 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms