RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 FBLN7Q53RD9 439 aa23.18■■□□□ 1.3
CTDNEP1-208ENST00000573600 FAM122CQ6P4D5 195 aa23.18■■□□□ 1.3
CTDNEP1-208ENST00000573600 SSMEM1Q8WWF3 244 aa23.18■■□□□ 1.3
CTDNEP1-208ENST00000573600 CARHSP1Q9Y2V2 147 aaKnown RBP23.18■■□□□ 1.3
CTDNEP1-208ENST00000573600 F11RQ9Y624 299 aaKnown RBP23.18■■□□□ 1.3
CTDNEP1-208ENST00000573600 SPG11Q96JI7 2443 aa23.18■■□□□ 1.3
CTDNEP1-208ENST00000573600 SEC14L6B5MCN3 397 aa23.17■■□□□ 1.3
CTDNEP1-208ENST00000573600 B2MP61769 119 aa23.17■■□□□ 1.3
CTDNEP1-208ENST00000573600 FXYD3Q14802 87 aa23.17■■□□□ 1.3
CTDNEP1-208ENST00000573600 MLANAQ16655 118 aa23.17■■□□□ 1.3
CTDNEP1-208ENST00000573600 C7orf69Q9H7B7 122 aa23.17■■□□□ 1.3
CTDNEP1-208ENST00000573600 SLC25A22Q9H936 323 aa23.17■■□□□ 1.3
CTDNEP1-208ENST00000573600 A0A096LNT2 108 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 YIF1AO95070 293 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 ADCYAP1P18509 176 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 CDC34P49427 236 aaPredicted RBP23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 ABHD5Q8WTS1 349 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 TRAV40A0A0B4J280 105 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 C9JQL5 133 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 PMS2P11Q13670 270 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 ZNF562Q6V9R5 426 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 STPG3Q8N7X2 389 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 LINC01356Q8N9X3 169 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 FNDC4Q9H6D8 234 aaPredicted RBP23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 HIF1ANQ9NWT6 349 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 SLC45A2Q9UMX9 530 aa23.16■■□□□ 1.3
CTDNEP1-208ENST00000573600 FGF8P55075 233 aaPredicted RBP23.15■■□□□ 1.3
CTDNEP1-208ENST00000573600 PRR20EP86478 221 aa23.15■■□□□ 1.3
CTDNEP1-208ENST00000573600 PRR20CP86479 221 aa23.15■■□□□ 1.3
CTDNEP1-208ENST00000573600 PRR20DP86480 221 aa23.15■■□□□ 1.3
CTDNEP1-208ENST00000573600 PRR20BP86481 221 aa23.15■■□□□ 1.3
CTDNEP1-208ENST00000573600 PRR20AP86496 221 aa23.15■■□□□ 1.3
CTDNEP1-208ENST00000573600 ZNF506Q5JVG8 444 aa23.15■■□□□ 1.3
CTDNEP1-208ENST00000573600 OR2T6Q8NHC8 308 aa23.15■■□□□ 1.3
CTDNEP1-208ENST00000573600 RAB24Q969Q5 203 aa23.15■■□□□ 1.3
CTDNEP1-208ENST00000573600 UTP20O75691 2785 aaKnown RBP23.15■■□□□ 1.3
CTDNEP1-208ENST00000573600 FAM120AOSQ5T036 256 aa23.14■■□□□ 1.3
CTDNEP1-208ENST00000573600 IGKV1OR2-108A0A075B7D4 117 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 A0A1W2PPV4 95 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 IFNA1P01562 189 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 APELAP0DMC3 54 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 PPT1P50897 306 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 DEFA5Q01523 94 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 LOXL1Q08397 574 aaPredicted RBP23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 HAGHQ16775 308 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 KHDC3LQ587J8 217 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 RUSC1-AS1Q66K80 236 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 OR1L6Q8NGR2 347 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 MISP3Q96FF7 219 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 ACY3Q96HD9 319 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 RARRES2Q99969 163 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 TACC2O95359 2948 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 CRYGCP07315 174 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 OR10J1P30954 320 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 MFAP2P55001 183 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 SVBPQ8N300 66 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 SLC35B3Q9H1N7 401 aa23.13■■□□□ 1.29
CTDNEP1-208ENST00000573600 NAV3Q8IVL0 2385 aa23.12■■□□□ 1.29
CTDNEP1-208ENST00000573600 GCSAMLQ5JQS6 135 aa23.12■■□□□ 1.29
CTDNEP1-208ENST00000573600 PSMG3-AS1Q96PY0 264 aa23.12■■□□□ 1.29
CTDNEP1-208ENST00000573600 GNG13Q9P2W3 67 aa23.12■■□□□ 1.29
CTDNEP1-208ENST00000573600 CTRB1P17538 263 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 CX3CL1P78423 397 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 CTRB2Q6GPI1 263 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 Q8N9W7 124 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 THAP8Q8NA92 274 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 C22orf15Q8WYQ4 148 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 ARPC1AQ92747 370 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 MBD6Q96DN6 1003 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 MEGF9Q9H1U4 602 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 IGHV3OR16-10A0A075B7F0 116 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 LOC102723971A0A1B0GUV8 181 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 HSPB1P04792 205 aaKnown RBP23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 LINC00869P0C866 280 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 TMEM249Q2WGJ8 235 aa23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 RBMS3Q6XE24 437 aaKnown RBP23.11■■□□□ 1.29
CTDNEP1-208ENST00000573600 BCL2P10415 239 aa23.1■■□□□ 1.29
CTDNEP1-208ENST00000573600 ICAM4Q14773 271 aa23.1■■□□□ 1.29
CTDNEP1-208ENST00000573600 NPIPB3Q92617 1050 aa23.1■■□□□ 1.29
CTDNEP1-208ENST00000573600 RASL11BQ9BPW5 248 aa23.1■■□□□ 1.29
CTDNEP1-208ENST00000573600 WNT10AQ9GZT5 417 aa23.1■■□□□ 1.29
CTDNEP1-208ENST00000573600 HLA-DRB1P01911 266 aa23.09■■□□□ 1.29
CTDNEP1-208ENST00000573600 IGHV4-38-2P0DP08 117 aa23.09■■□□□ 1.29
CTDNEP1-208ENST00000573600 BRD3OSQ6XYD6 125 aa23.09■■□□□ 1.29
CTDNEP1-208ENST00000573600 CYP2G1PQ6ZSU1 146 aa23.09■■□□□ 1.29
CTDNEP1-208ENST00000573600 ZFP92A6NM28 416 aa23.08■■□□□ 1.29
CTDNEP1-208ENST00000573600 HMGB3O15347 200 aaKnown RBP23.08■■□□□ 1.29
CTDNEP1-208ENST00000573600 DEFA4P12838 97 aa23.08■■□□□ 1.29
CTDNEP1-208ENST00000573600 TAGLN2P37802 199 aaKnown RBP23.08■■□□□ 1.29
CTDNEP1-208ENST00000573600 RHOBP62745 196 aa23.08■■□□□ 1.29
CTDNEP1-208ENST00000573600 SLC25A33Q9BSK2 321 aa23.08■■□□□ 1.29
CTDNEP1-208ENST00000573600 C19orf24Q9BVV8 132 aa23.08■■□□□ 1.29
CTDNEP1-208ENST00000573600 J3QLI3 93 aa23.08■■□□□ 1.28
CTDNEP1-208ENST00000573600 RND2P52198 227 aa23.08■■□□□ 1.28
CTDNEP1-208ENST00000573600 Q5PR19 223 aa23.08■■□□□ 1.28
CTDNEP1-208ENST00000573600 RXFP4Q8TDU9 374 aa23.08■■□□□ 1.28
CTDNEP1-208ENST00000573600 NPIPB5A8MRT5 1133 aa23.07■■□□□ 1.28
CTDNEP1-208ENST00000573600 EIF3GO75821 320 aaKnown RBP eCLIP23.07■■□□□ 1.282e-6■■□□□ 12.1
CTDNEP1-208ENST00000573600 SCO1O75880 301 aa23.07■■□□□ 1.28
CTDNEP1-208ENST00000573600 PRSS57Q6UWY2 283 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms