RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 SLC25A24Q6NUK1 477 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 LCNL1Q6ZST4 164 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 ZBTB8BQ8NAP8 495 aaPredicted RBP12.94□□□□□ -0.34
CLN6-208ENST00000567060 SLC24A4Q8NFF2 622 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 EEF1AKMT3Q96AZ1 226 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 RBKSQ9H477 322 aa12.94□□□□□ -0.34
CLN6-208ENST00000567060 C5orf51A6NDU8 294 aa12.93□□□□□ -0.34
CLN6-208ENST00000567060 WRBO00258 174 aa12.93□□□□□ -0.34
CLN6-208ENST00000567060 SSNA1O43805 119 aa12.93□□□□□ -0.34
CLN6-208ENST00000567060 PRB2P02812 416 aaPredicted RBP12.93□□□□□ -0.34
CLN6-208ENST00000567060 RNASE2P10153 161 aaKnown RBP12.93□□□□□ -0.34
CLN6-208ENST00000567060 RNASEH2CQ8TDP1 164 aaKnown RBP12.93□□□□□ -0.34
CLN6-208ENST00000567060 OR10C1Q96KK4 312 aa12.93□□□□□ -0.34
CLN6-208ENST00000567060 RANGRFQ9HD47 186 aaPredicted RBP12.93□□□□□ -0.34
CLN6-208ENST00000567060 A0A1W2PRX2 142 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 MPTX1A8MV57 137 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 PRH1P02810 166 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 HSPB1P04792 205 aaKnown RBP12.92□□□□□ -0.34
CLN6-208ENST00000567060 OR8U8P0C7N1 319 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 NPY1RP25929 384 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 FCGR2BP31994 310 aaPredicted RBP12.92□□□□□ -0.34
CLN6-208ENST00000567060 TAS2R30P59541 319 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 FHL3Q13643 280 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 SPINK9Q5DT21 86 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 KPRPQ5T749 579 aaPredicted RBP12.92□□□□□ -0.34
CLN6-208ENST00000567060 RAB40CQ96S21 281 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 TXN2Q99757 166 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 GNB4Q9HAV0 340 aa12.92□□□□□ -0.34
CLN6-208ENST00000567060 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.91□□□□□ -0.34
CLN6-208ENST00000567060 RPS10-NUDT3A0A1W2PQS6 291 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 FAM25EA8MYX2 175 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 CCL24O00175 119 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 PF4P02776 101 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 ZP3P21754 424 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 ZNF616Q08AN1 781 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 ETFRF1Q6IPR1 90 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 C8orf86Q6ZUL3 223 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 ASB13Q8WXK3 278 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 DPF1Q92782 380 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 NMES1Q9C002 83 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 GSKIPQ9P0R6 139 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 PEF1Q9UBV8 284 aaKnown RBP12.91□□□□□ -0.34
CLN6-208ENST00000567060 DMRT1Q9Y5R6 373 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 ALG5Q9Y673 324 aa12.91□□□□□ -0.34
CLN6-208ENST00000567060 LINC01619G3V211 115 aa12.9□□□□□ -0.34
CLN6-208ENST00000567060 CCSO14618 274 aa12.9□□□□□ -0.34
CLN6-208ENST00000567060 SCAF4O95104 1147 aaKnown RBP12.9□□□□□ -0.34
CLN6-208ENST00000567060 NDUFB8O95169 186 aa12.9□□□□□ -0.34
CLN6-208ENST00000567060 IFNA10P01566 189 aa12.9□□□□□ -0.34
CLN6-208ENST00000567060 MFAP2P55001 183 aa12.9□□□□□ -0.34
CLN6-208ENST00000567060 RAB11AP62491 216 aa12.9□□□□□ -0.34
CLN6-208ENST00000567060 IL15RAQ13261 267 aa12.9□□□□□ -0.34
CLN6-208ENST00000567060 OR11H1Q8NG94 326 aa12.9□□□□□ -0.34
CLN6-208ENST00000567060 OR1N2Q8NGR9 330 aa12.9□□□□□ -0.34
CLN6-208ENST00000567060 SMIM8Q96KF7 97 aa12.9□□□□□ -0.34
CLN6-208ENST00000567060 NOTCH3Q9UM47 2321 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 I3L2K1 104 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 K7EIM0 57 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 GOSR2O14653 212 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 SCGB2A1O75556 95 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 NXPH3O95157 252 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 IGHV3-11P01762 117 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 SLC25A4P12235 298 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 PVALBP20472 110 aaPredicted RBP12.89□□□□□ -0.35
CLN6-208ENST00000567060 SAMD5Q5TGI4 173 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 SPSB3Q6PJ21 355 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 ZNF502Q8TBZ5 544 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 MISP3Q96FF7 219 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 RAX2Q96IS3 184 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 C21orf62Q9NYP8 219 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 DNAH9Q9NYC9 4486 aa12.89□□□□□ -0.35
CLN6-208ENST00000567060 TSC22D2O75157 780 aa12.88□□□□□ -0.35
CLN6-208ENST00000567060 MT-CO2P00403 227 aa12.88□□□□□ -0.35
CLN6-208ENST00000567060 MFAP4P55083 255 aa12.88□□□□□ -0.35
CLN6-208ENST00000567060 POLR2GP62487 172 aaKnown RBP eCLIP12.88□□□□□ -0.35
CLN6-208ENST00000567060 ETV3LQ6ZN32 361 aa12.88□□□□□ -0.35
CLN6-208ENST00000567060 C19orf35Q6ZS72 473 aa12.88□□□□□ -0.35
CLN6-208ENST00000567060 C18orf65Q6ZTR6 163 aa12.88□□□□□ -0.35
CLN6-208ENST00000567060 SCARB1Q8WTV0 552 aa12.88□□□□□ -0.35
CLN6-208ENST00000567060 CACNG8Q8WXS5 425 aa12.88□□□□□ -0.35
CLN6-208ENST00000567060 BSCL2Q96G97 398 aaPredicted RBP12.88□□□□□ -0.35
CLN6-208ENST00000567060 MED28Q9H204 178 aa12.88□□□□□ -0.35
CLN6-208ENST00000567060 SCGB1D2O95969 90 aa12.87□□□□□ -0.35
CLN6-208ENST00000567060 MBPP02686 304 aaPredicted RBP12.87□□□□□ -0.35
CLN6-208ENST00000567060 OPRK1P41145 380 aa12.87□□□□□ -0.35
CLN6-208ENST00000567060 NPBWR1P48145 328 aa12.87□□□□□ -0.35
CLN6-208ENST00000567060 WFDC9Q8NEX5 89 aa12.87□□□□□ -0.35
CLN6-208ENST00000567060 CCDC140Q96MF4 163 aa12.87□□□□□ -0.35
CLN6-208ENST00000567060 MAGT1Q9H0U3 335 aa12.87□□□□□ -0.35
CLN6-208ENST00000567060 MGAT4CQ9UBM8 478 aa12.87□□□□□ -0.35
CLN6-208ENST00000567060 STRAPQ9Y3F4 350 aaKnown RBP12.87□□□□□ -0.35
CLN6-208ENST00000567060 COL7A1Q02388 2944 aa12.87□□□□□ -0.35
CLN6-208ENST00000567060 MFSD2BA6NFX1 497 aa12.86□□□□□ -0.35
CLN6-208ENST00000567060 K7EPK0 472 aa12.86□□□□□ -0.35
CLN6-208ENST00000567060 SSSCA1O60232 199 aa12.86□□□□□ -0.35
CLN6-208ENST00000567060 GGCTO75223 188 aaKnown RBP12.86□□□□□ -0.35
CLN6-208ENST00000567060 RLN2P04090 185 aa12.86□□□□□ -0.35
CLN6-208ENST00000567060 IFNA4P05014 189 aa12.86□□□□□ -0.35
CLN6-208ENST00000567060 PET100P0DJ07 73 aa12.86□□□□□ -0.35
CLN6-208ENST00000567060 IAPPP10997 89 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms