RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 C2orf50Q96LR7 162 aa8.92□□□□□ -0.98
KARS-207ENST00000566560 P2RX4Q99571 388 aa8.92□□□□□ -0.98
KARS-207ENST00000566560 MED28Q9H204 178 aa8.92□□□□□ -0.98
KARS-207ENST00000566560 ZFP57Q9NU63 452 aa8.92□□□□□ -0.98
KARS-207ENST00000566560 DMRT1Q9Y5R6 373 aa8.92□□□□□ -0.98
KARS-207ENST00000566560 TRBV9A0A0B4J1U6 114 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 A0A0G2JLM5 398 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 SYNGR2O43760 224 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 IGHV3-11P01762 117 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 RNASE2P10153 161 aaKnown RBP8.91□□□□□ -0.98
KARS-207ENST00000566560 NPY1RP25929 384 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 HTR2BP41595 481 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 SUB1P53999 127 aaKnown RBP eCLIP8.91□□□□□ -0.98
KARS-207ENST00000566560 MFAP2P55001 183 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 S100A10P60903 97 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 POLR2GP62487 172 aaKnown RBP eCLIP8.91□□□□□ -0.98
KARS-207ENST00000566560 EXOSC2Q13868 293 aaKnown RBP8.91□□□□□ -0.98
KARS-207ENST00000566560 C15orf32Q32M92 178 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 SLC25A24Q6NUK1 477 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 C18orf65Q6ZTR6 163 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 ZNF491Q8N8L2 437 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 NECAP1Q8NC96 275 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 C4orf3Q8WVX3 66 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 MISP3Q96FF7 219 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 UBE2E2Q96LR5 201 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 CIB3Q96Q77 187 aaPredicted RBP8.91□□□□□ -0.98
KARS-207ENST00000566560 OR5B12Q96R08 314 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 GNB4Q9HAV0 340 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 THYN1Q9P016 225 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 FBXL7Q9UJT9 491 aa8.91□□□□□ -0.98
KARS-207ENST00000566560 RCL1Q9Y2P8 373 aaKnown RBP8.91□□□□□ -0.98
KARS-207ENST00000566560 IFNA10P01566 189 aa8.9□□□□□ -0.98
KARS-207ENST00000566560 MBPP02686 304 aaPredicted RBP8.9□□□□□ -0.98
KARS-207ENST00000566560 LGALS1P09382 135 aaKnown RBP8.9□□□□□ -0.98
KARS-207ENST00000566560 CDX1P47902 265 aaPredicted RBP8.9□□□□□ -0.98
KARS-207ENST00000566560 H2BFSP57053 126 aa8.9□□□□□ -0.98
KARS-207ENST00000566560 FCN2Q15485 313 aa8.9□□□□□ -0.98
KARS-207ENST00000566560 BSXQ3C1V8 233 aa8.9□□□□□ -0.98
KARS-207ENST00000566560 SPATA3Q8NHX4 192 aa8.9□□□□□ -0.98
KARS-207ENST00000566560 USMG5Q96IX5 58 aa8.9□□□□□ -0.98
KARS-207ENST00000566560 LSM5Q9Y4Y9 91 aaKnown RBP8.9□□□□□ -0.98
KARS-207ENST00000566560 WNK1Q9H4A3 2382 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 MFSD2BA6NFX1 497 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 H3BP45 60 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 K7EPK0 472 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 CORTO00230 105 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 NDUFB8O95169 186 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 LY86O95711 162 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 ADMP35318 185 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 RRAS2P62070 204 aaPredicted RBP8.89□□□□□ -0.99
KARS-207ENST00000566560 ATP5G2Q06055 141 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 RAB32Q13637 225 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 KIAA0141Q14154 515 aaPredicted RBP8.89□□□□□ -0.99
KARS-207ENST00000566560 KLK9Q2XQG4 91 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 DEFB136Q30KP8 78 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 C2orf83Q53S99 150 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 OR11H7Q8NGC8 314 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 EEF1AKMT3Q96AZ1 226 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 PINX1Q96BK5 328 aaKnown RBP8.89□□□□□ -0.99
KARS-207ENST00000566560 NMES1Q9C002 83 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 KLK9Q9UKQ9 250 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 PAIP2BQ9ULR5 123 aaKnown RBP8.89□□□□□ -0.99
KARS-207ENST00000566560 S4R3C0 116 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 U3KQ87 197 aa8.89□□□□□ -0.99
KARS-207ENST00000566560 IGHV3-21A0A0B4J1V1 117 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 K7EIM0 57 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 L7N2F9 121 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 M0QZ24 198 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 IGHV3-23P01764 117 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 OR8U8P0C7N1 319 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 CXCL3P19876 107 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 OPRK1P41145 380 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 VAMP2P63027 116 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 CYCSP99999 105 aaKnown RBP8.88□□□□□ -0.99
KARS-207ENST00000566560 IL15RAQ13261 267 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 LRRC37A5PQ49AS3 106 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 NOXA1Q86UR1 476 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 OR4F17Q8NGA8 305 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 TMEM170AQ8WVE7 144 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 CXorf58Q96LI9 332 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 OR4C12Q96R67 309 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 OR4F4Q96R69 305 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 RAB40CQ96S21 281 aa8.88□□□□□ -0.99
KARS-207ENST00000566560 C15orf62A8K5M9 175 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 TSPAN15O95858 294 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 MT-CO2P00403 227 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 IFNA4P05014 189 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 PET100P0DJ07 73 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 PVALBP20472 110 aaPredicted RBP8.87□□□□□ -0.99
KARS-207ENST00000566560 RAB11AP62491 216 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 RPP30P78346 268 aaKnown RBP8.87□□□□□ -0.99
KARS-207ENST00000566560 RUNX1Q01196 453 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 SPANXN5Q5MJ07 72 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 PVRIGQ6DKI7 326 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 ZNF343Q6P1L6 599 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 RNASEH2CQ8TDP1 164 aaKnown RBP8.87□□□□□ -0.99
KARS-207ENST00000566560 VN1R17PQ8TDU5 208 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 CCDC140Q96MF4 163 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 C21orf62Q9NYP8 219 aa8.87□□□□□ -0.99
KARS-207ENST00000566560 PSENENQ9NZ42 101 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms