RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 SSBP1Q04837 148 aaKnown RBP11.14□□□□□ -0.63
SPG7-210ENST00000564409 TNFRSF9Q07011 255 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 CTF1Q16619 201 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 ODF3L2Q3SX64 289 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 CCDC71LQ8N9Z2 235 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 TERB2Q8NHR7 220 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 RHPN1-AS1Q9BWJ2 59 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 KLK11Q9UBX7 282 aa11.14□□□□□ -0.63
SPG7-210ENST00000564409 TRAV14DV4A0A0A6YYC5 116 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 YIF1AO95070 293 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 CD3DP04234 171 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 AKR1C2P52895 323 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 PAFAH1B2P68402 229 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 MRPS10P82664 201 aaKnown RBP11.13□□□□□ -0.63
SPG7-210ENST00000564409 SLC35G3Q8N808 338 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 TMEM229BQ8NBD8 167 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 DUSP18Q8NEJ0 188 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 OR52I2Q8NH67 350 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 PDCD10Q9BUL8 212 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 COPZ2Q9P299 210 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 EXTL2Q9UBQ6 330 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 UBQLN2Q9UHD9 624 aa11.13□□□□□ -0.63
SPG7-210ENST00000564409 STARD9Q9P2P6 4700 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 IGHV3OR16-8A0A075B7F1 116 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 C3orf85A0A1B0GTC6 90 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 ZNF207O43670 478 aaKnown RBP11.12□□□□□ -0.63
SPG7-210ENST00000564409 SCGB2A1O75556 95 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 CD74P04233 296 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 P0C879 139 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 TAS2R19P59542 299 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 GPR107Q5VW38 600 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 TMEM217Q8N7C4 229 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 RNF183Q96D59 192 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 RRNAD1Q96FB5 475 aaKnown RBP11.12□□□□□ -0.63
SPG7-210ENST00000564409 TP53RKQ96S44 253 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 RNF2Q99496 336 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 RABL2AQ9UBK7 228 aaPredicted RBP11.12□□□□□ -0.63
SPG7-210ENST00000564409 RABL2BQ9UNT1 228 aa11.12□□□□□ -0.63
SPG7-210ENST00000564409 A0A0B4J293 547 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 GABARAPH6UMI1 98 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 IFNA17P01571 189 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 IGKV1-5P01602 117 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 UCP1P25874 307 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 MEF2DQ14814 521 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 PVRIGQ6DKI7 326 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 FAM219AQ8IW50 185 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 PINX1Q96BK5 328 aaKnown RBP11.11□□□□□ -0.63
SPG7-210ENST00000564409 ABHD1Q96SE0 405 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 MAP6D1Q9H9H5 199 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 ENY2Q9NPA8 101 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 CACFD1Q9UGQ2 172 aa11.11□□□□□ -0.63
SPG7-210ENST00000564409 NUPR2A6NF83 97 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 ST8SIA3O43173 380 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 RAB3DO95716 219 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 PI3P19957 117 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 SURF2Q15527 256 aaPredicted RBP11.1□□□□□ -0.63
SPG7-210ENST00000564409 TRIM16LQ309B1 348 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 DEFB135Q30KP9 77 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 FAM90A2PQ658T7 463 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 ZNF600Q6ZNG1 722 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 LYG2Q86SG7 212 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 ZNF414Q96IQ9 312 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 TMEM231Q9H6L2 316 aa11.1□□□□□ -0.63
SPG7-210ENST00000564409 TRAV2A0A0B4J234 112 aa11.09□□□□□ -0.63
SPG7-210ENST00000564409 A0A0J9YWU9 116 aa11.09□□□□□ -0.63
SPG7-210ENST00000564409 DFFBO76075 338 aa11.09□□□□□ -0.63
SPG7-210ENST00000564409 SMIM18P0DKX4 95 aa11.09□□□□□ -0.63
SPG7-210ENST00000564409 RPL5P46777 297 aaKnown RBP11.09□□□□□ -0.63
SPG7-210ENST00000564409 AARDQ4LEZ3 155 aa11.09□□□□□ -0.63
SPG7-210ENST00000564409 STEAP1BQ6NZ63 245 aa11.09□□□□□ -0.63
SPG7-210ENST00000564409 TOMM20LQ6UXN7 152 aa11.09□□□□□ -0.63
SPG7-210ENST00000564409 OR13C8Q8NGS7 320 aa11.09□□□□□ -0.63
SPG7-210ENST00000564409 RNASE11Q8TAA1 199 aaKnown RBP11.09□□□□□ -0.63
SPG7-210ENST00000564409 GATAD1Q8WUU5 269 aa11.09□□□□□ -0.63
SPG7-210ENST00000564409 NAA50Q9GZZ1 169 aaKnown RBP11.09□□□□□ -0.63
SPG7-210ENST00000564409 VSIRQ9H7M9 311 aa11.09□□□□□ -0.63
SPG7-210ENST00000564409 C14orf166Q9Y224 244 aaKnown RBP11.09□□□□□ -0.63
SPG7-210ENST00000564409 EPPK1P58107 5090 aaKnown RBP11.09□□□□□ -0.63
SPG7-210ENST00000564409 A0A1W2PS18 150 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 CXorf65A6NEN9 183 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 RGS5O15539 181 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 TMEM50AO95807 157 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 IGHV3-48P01763 117 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 RPL35AP18077 110 aaKnown RBP11.08□□□□□ -0.64
SPG7-210ENST00000564409 HOXA1P49639 335 aaPredicted RBP11.08□□□□□ -0.64
SPG7-210ENST00000564409 PPP5CP53041 499 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 SPCS3P61009 180 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 IZUMO4Q1ZYL8 232 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 SCGB2B2Q4G0G5 96 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 RNASE12Q5GAN4 147 aaKnown RBP11.08□□□□□ -0.64
SPG7-210ENST00000564409 GPR141Q7Z602 305 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 OR52E5Q8NH55 327 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 MRPS26Q9BYN8 205 aaKnown RBP11.08□□□□□ -0.64
SPG7-210ENST00000564409 TMEM222Q9H0R3 208 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 CSTL1Q9H114 145 aa11.08□□□□□ -0.64
SPG7-210ENST00000564409 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.08□□□□□ -0.64
SPG7-210ENST00000564409 TRAV30A0A087WSZ9 112 aa11.07□□□□□ -0.64
SPG7-210ENST00000564409 MPTX1A8MV57 137 aa11.07□□□□□ -0.64
SPG7-210ENST00000564409 CDS2O95674 445 aa11.07□□□□□ -0.64
SPG7-210ENST00000564409 RNASE2P10153 161 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms